RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 IGKV5-2P06315 115 aa17.15■□□□□ 0.34
CPNE1-227ENST00000498056 ZNF34Q8IZ26 560 aa17.15■□□□□ 0.34
CPNE1-227ENST00000498056 NLGN1Q8N2Q7 840 aa17.15■□□□□ 0.34
CPNE1-227ENST00000498056 SETDB2Q96T68 719 aa17.15■□□□□ 0.34
CPNE1-227ENST00000498056 ISCA1Q9BUE6 129 aa17.15■□□□□ 0.34
CPNE1-227ENST00000498056 CWC25Q9NXE8 425 aaPredicted RBP17.15■□□□□ 0.34
CPNE1-227ENST00000498056 MMP10P09238 476 aa17.14■□□□□ 0.33
CPNE1-227ENST00000498056 IRX6P78412 446 aaPredicted RBP17.14■□□□□ 0.33
CPNE1-227ENST00000498056 PARP10Q53GL7 1025 aa17.14■□□□□ 0.33
CPNE1-227ENST00000498056 NLRP10Q86W26 655 aa17.14■□□□□ 0.33
CPNE1-227ENST00000498056 SLC16A10Q8TF71 515 aa17.14■□□□□ 0.33
CPNE1-227ENST00000498056 MTFR1LQ9H019 292 aa17.14■□□□□ 0.33
CPNE1-227ENST00000498056 COG6Q9Y2V7 657 aa17.14■□□□□ 0.33
CPNE1-227ENST00000498056 ALDH1L1O75891 902 aa17.13■□□□□ 0.33
CPNE1-227ENST00000498056 DDR1Q08345 913 aa17.13■□□□□ 0.33
CPNE1-227ENST00000498056 PDE3AQ14432 1141 aa17.13■□□□□ 0.33
CPNE1-227ENST00000498056 MVPQ14764 893 aaKnown RBP17.13■□□□□ 0.33
CPNE1-227ENST00000498056 RTL5Q5HYW3 569 aaPredicted RBP17.13■□□□□ 0.33
CPNE1-227ENST00000498056 INTS3Q68E01 1043 aaKnown RBP17.13■□□□□ 0.33
CPNE1-227ENST00000498056 LRP5O75197 1615 aa17.13■□□□□ 0.33
CPNE1-227ENST00000498056 ABCC12Q96J65 1359 aa17.13■□□□□ 0.33
CPNE1-227ENST00000498056 TAF1P21675 1872 aa17.12■□□□□ 0.33
CPNE1-227ENST00000498056 POLRMTO00411 1230 aaKnown RBP17.12■□□□□ 0.33
CPNE1-227ENST00000498056 GCKRQ14397 625 aa17.12■□□□□ 0.33
CPNE1-227ENST00000498056 PPP1R42Q7Z4L9 355 aa17.12■□□□□ 0.33
CPNE1-227ENST00000498056 NBPF5PQ86XG9 351 aaPredicted RBP17.12■□□□□ 0.33
CPNE1-227ENST00000498056 CCDC191Q8NCU4 936 aa17.12■□□□□ 0.33
CPNE1-227ENST00000498056 ATF5Q9Y2D1 282 aaPredicted RBP17.12■□□□□ 0.33
CPNE1-227ENST00000498056 PARP3Q9Y6F1 533 aa17.12■□□□□ 0.33
CPNE1-227ENST00000498056 KIAA1551Q9HCM1 1747 aa17.12■□□□□ 0.33
CPNE1-227ENST00000498056 NTSR2O95665 410 aa17.11■□□□□ 0.33
CPNE1-227ENST00000498056 SUSD4Q5VX71 490 aa17.11■□□□□ 0.33
CPNE1-227ENST00000498056 CNBD1Q8NA66 436 aa17.11■□□□□ 0.33
CPNE1-227ENST00000498056 UTP14AQ9BVJ6 771 aaKnown RBP17.11■□□□□ 0.33
CPNE1-227ENST00000498056 NYXQ9GZU5 481 aa17.11■□□□□ 0.33
CPNE1-227ENST00000498056 TRMT112Q9UI30 125 aaKnown RBP17.11■□□□□ 0.33
CPNE1-227ENST00000498056 GRM8O00222 908 aa17.1■□□□□ 0.33
CPNE1-227ENST00000498056 NEFLP07196 543 aa17.1■□□□□ 0.33
CPNE1-227ENST00000498056 POLD1P28340 1107 aa17.1■□□□□ 0.33
CPNE1-227ENST00000498056 GTF2E1P29083 439 aaPredicted RBP17.1■□□□□ 0.33
CPNE1-227ENST00000498056 UBE3BQ7Z3V4 1068 aa17.1■□□□□ 0.33
CPNE1-227ENST00000498056 NUTM1Q86Y26 1132 aa17.1■□□□□ 0.33
CPNE1-227ENST00000498056 CRBNQ96SW2 442 aa17.1■□□□□ 0.33
CPNE1-227ENST00000498056 C9orf78Q9NZ63 289 aaPredicted RBP17.1■□□□□ 0.33
CPNE1-227ENST00000498056 SH3TC1Q8TE82 1336 aa17.1■□□□□ 0.33
CPNE1-227ENST00000498056 BRCA1P38398 1863 aaKnown RBP17.1■□□□□ 0.33
CPNE1-227ENST00000498056 SERPINB2P05120 415 aa17.09■□□□□ 0.33
CPNE1-227ENST00000498056 TM4SF1P30408 202 aa17.09■□□□□ 0.33
CPNE1-227ENST00000498056 TRIM28Q13263 835 aaKnown RBP17.09■□□□□ 0.33
CPNE1-227ENST00000498056 JARID2Q92833 1246 aaPredicted RBP17.09■□□□□ 0.33
CPNE1-227ENST00000498056 MEIS3Q99687 375 aa17.09■□□□□ 0.33
CPNE1-227ENST00000498056 DDX19BQ9UMR2 479 aa17.09■□□□□ 0.33
CPNE1-227ENST00000498056 C10orf71Q711Q0 1435 aa17.09■□□□□ 0.33
CPNE1-227ENST00000498056 A0A1B0GUL6 1792 aa17.08■□□□□ 0.33
CPNE1-227ENST00000498056 PCCAP05165 728 aaPredicted RBP17.08■□□□□ 0.32
CPNE1-227ENST00000498056 UBTFL1P0CB47 393 aaPredicted RBP17.08■□□□□ 0.32
CPNE1-227ENST00000498056 ST5P78524 1137 aa17.08■□□□□ 0.32
CPNE1-227ENST00000498056 CCDC24Q8N4L8 307 aa17.08■□□□□ 0.32
CPNE1-227ENST00000498056 FAM89AQ96GI7 184 aa17.08■□□□□ 0.32
CPNE1-227ENST00000498056 RIC1Q4ADV7 1423 aa17.07■□□□□ 0.32
CPNE1-227ENST00000498056 ERFEQ4G0M1 354 aa17.07■□□□□ 0.32
CPNE1-227ENST00000498056 PRR5LQ6MZQ0 368 aa17.07■□□□□ 0.32
CPNE1-227ENST00000498056 ZBTB38Q8NAP3 1195 aaPredicted RBP17.07■□□□□ 0.32
CPNE1-227ENST00000498056 CDHR2Q9BYE9 1310 aa17.06■□□□□ 0.32
CPNE1-227ENST00000498056 NBPF7P0C2Y1 421 aaPredicted RBP17.06■□□□□ 0.32
CPNE1-227ENST00000498056 TPTE2Q6XPS3 522 aa17.06■□□□□ 0.32
CPNE1-227ENST00000498056 GNAI3P08754 354 aa17.05■□□□□ 0.32
CPNE1-227ENST00000498056 SYNE4Q8N205 404 aa17.05■□□□□ 0.32
CPNE1-227ENST00000498056 USP44Q9H0E7 712 aa17.05■□□□□ 0.32
CPNE1-227ENST00000498056 C1orf115Q9H7X2 142 aa17.05■□□□□ 0.32
CPNE1-227ENST00000498056 SPON1Q9HCB6 807 aa17.05■□□□□ 0.32
CPNE1-227ENST00000498056 UTYO14607 1347 aa17.04■□□□□ 0.32
CPNE1-227ENST00000498056 IRS4O14654 1257 aaPredicted RBP17.04■□□□□ 0.32
CPNE1-227ENST00000498056 HCLS1P14317 486 aaPredicted RBP17.04■□□□□ 0.32
CPNE1-227ENST00000498056 KLHL34Q8N239 644 aa17.04■□□□□ 0.32
CPNE1-227ENST00000498056 SUCLG2Q96I99 432 aa17.04■□□□□ 0.32
CPNE1-227ENST00000498056 H7C1W4 665 aa17.03■□□□□ 0.32
CPNE1-227ENST00000498056 PTGER2P43116 358 aa17.03■□□□□ 0.32
CPNE1-227ENST00000498056 CASP7P55210 303 aa17.03■□□□□ 0.32
CPNE1-227ENST00000498056 EXOC6Q8TAG9 804 aa17.03■□□□□ 0.32
CPNE1-227ENST00000498056 LRRFIP2Q9Y608 721 aaKnown RBP17.03■□□□□ 0.32
CPNE1-227ENST00000498056 COL4A1P02462 1669 aa17.02■□□□□ 0.32
CPNE1-227ENST00000498056 SGIP1Q9BQI5 828 aa17.02■□□□□ 0.32
CPNE1-227ENST00000498056 CHMP4BQ9H444 224 aaKnown RBP17.02■□□□□ 0.32
CPNE1-227ENST00000498056 ZBTB7BO15156 539 aaPredicted RBP17.01■□□□□ 0.31
CPNE1-227ENST00000498056 PDE8AO60658 829 aa17.01■□□□□ 0.31
CPNE1-227ENST00000498056 GNAI2P04899 355 aa17.01■□□□□ 0.31
CPNE1-227ENST00000498056 HSP90B1P14625 803 aaKnown RBP17.01■□□□□ 0.31
CPNE1-227ENST00000498056 BICC1Q9H694 974 aaKnown RBP17.01■□□□□ 0.31
CPNE1-227ENST00000498056 CHMP3Q9Y3E7 222 aa17.01■□□□□ 0.31
CPNE1-227ENST00000498056 LRRC37AA6NMS7 1700 aa17.01■□□□□ 0.31
CPNE1-227ENST00000498056 CTSWP56202 376 aa17■□□□□ 0.31
CPNE1-227ENST00000498056 CCDC85AQ96PX6 553 aaPredicted RBP17■□□□□ 0.31
CPNE1-227ENST00000498056 PPP1R1BQ9UD71 204 aaPredicted RBP17■□□□□ 0.31
CPNE1-227ENST00000498056 HDAC5Q9UQL6 1122 aa17■□□□□ 0.31
CPNE1-227ENST00000498056 ARFGEF1Q9Y6D6 1849 aa16.99■□□□□ 0.31
CPNE1-227ENST00000498056 C3orf67Q6ZVT6 689 aa16.99■□□□□ 0.31
CPNE1-227ENST00000498056 ZBTB40Q9NUA8 1239 aa16.99■□□□□ 0.31
CPNE1-227ENST00000498056 SLX4Q8IY92 1834 aa16.98■□□□□ 0.31
CPNE1-227ENST00000498056 FAM161AQ3B820 660 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms