RNA–Protein interactions for RNA: ENST00000497423.1

LCLAT1-212, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 3

Gene LCLAT1, Length 658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-212ENST00000497423 ABCC12Q96J65 1359 aa17.86■□□□□ 0.45
LCLAT1-212ENST00000497423 CACNA1SQ13698 1873 aa17.86■□□□□ 0.45
LCLAT1-212ENST00000497423 RASSF7Q02833 373 aa17.85■□□□□ 0.45
LCLAT1-212ENST00000497423 SOGA3Q5TF21 947 aa17.85■□□□□ 0.45
LCLAT1-212ENST00000497423 CCDC30Q5VVM6 783 aa17.85■□□□□ 0.45
LCLAT1-212ENST00000497423 NLRP10Q86W26 655 aa17.85■□□□□ 0.45
LCLAT1-212ENST00000497423 RNF181Q9P0P0 153 aa17.85■□□□□ 0.45
LCLAT1-212ENST00000497423 CCDC88AQ3V6T2 1871 aa17.84■□□□□ 0.45
LCLAT1-212ENST00000497423 TNRC6CQ9HCJ0 1690 aaKnown RBP17.84■□□□□ 0.45
LCLAT1-212ENST00000497423 LMNB1P20700 586 aa17.84■□□□□ 0.45
LCLAT1-212ENST00000497423 PRELPP51888 382 aa17.84■□□□□ 0.45
LCLAT1-212ENST00000497423 ISCA1Q9BUE6 129 aa17.84■□□□□ 0.45
LCLAT1-212ENST00000497423 PHAXQ9H814 394 aaKnown RBP17.84■□□□□ 0.45
LCLAT1-212ENST00000497423 SALL2Q9Y467 1007 aaPredicted RBP17.84■□□□□ 0.45
LCLAT1-212ENST00000497423 LTBP3Q9NS15 1303 aa17.83■□□□□ 0.44
LCLAT1-212ENST00000497423 ZC3H4Q9UPT8 1303 aaKnown RBP17.83■□□□□ 0.44
LCLAT1-212ENST00000497423 HOXA10P31260 410 aaPredicted RBP17.83■□□□□ 0.44
LCLAT1-212ENST00000497423 TRIM28Q13263 835 aaKnown RBP17.83■□□□□ 0.44
LCLAT1-212ENST00000497423 ZNF219Q9P2Y4 722 aaPredicted RBP17.83■□□□□ 0.44
LCLAT1-212ENST00000497423 TWISTNBQ3B726 338 aaPredicted RBP17.82■□□□□ 0.44
LCLAT1-212ENST00000497423 ZNF526Q8TF50 670 aaPredicted RBP17.82■□□□□ 0.44
LCLAT1-212ENST00000497423 NLRP3Q96P20 1036 aa17.82■□□□□ 0.44
LCLAT1-212ENST00000497423 C1QTNF8P60827 252 aa17.81■□□□□ 0.44
LCLAT1-212ENST00000497423 CRAMP1Q96RY5 1269 aa17.81■□□□□ 0.44
LCLAT1-212ENST00000497423 TRMT112Q9UI30 125 aaKnown RBP17.81■□□□□ 0.44
LCLAT1-212ENST00000497423 DICER1Q9UPY3 1922 aaKnown RBP17.8■□□□□ 0.44
LCLAT1-212ENST00000497423 FANCIQ9NVI1 1328 aa17.8■□□□□ 0.44
LCLAT1-212ENST00000497423 GOLGA2Q08379 1002 aa17.8■□□□□ 0.44
LCLAT1-212ENST00000497423 CCDC93Q567U6 631 aa17.8■□□□□ 0.44
LCLAT1-212ENST00000497423 RIC3Q7Z5B4 369 aa17.8■□□□□ 0.44
LCLAT1-212ENST00000497423 RPGRQ92834 1020 aaKnown RBP17.8■□□□□ 0.44
LCLAT1-212ENST00000497423 SH3TC1Q8TE82 1336 aa17.79■□□□□ 0.44
LCLAT1-212ENST00000497423 C3orf67Q6ZVT6 689 aa17.79■□□□□ 0.44
LCLAT1-212ENST00000497423 SYNE4Q8N205 404 aa17.79■□□□□ 0.44
LCLAT1-212ENST00000497423 RBM17Q96I25 401 aaKnown RBP17.79■□□□□ 0.44
LCLAT1-212ENST00000497423 TAOK3Q9H2K8 898 aa17.79■□□□□ 0.44
LCLAT1-212ENST00000497423 ATP5J2-PTCD1G3V325 749 aa17.78■□□□□ 0.44
LCLAT1-212ENST00000497423 CCER2I3L3R5 266 aa17.78■□□□□ 0.44
LCLAT1-212ENST00000497423 KIF3CO14782 793 aa17.78■□□□□ 0.44
LCLAT1-212ENST00000497423 DDX58O95786 925 aaKnown RBP17.78■□□□□ 0.44
LCLAT1-212ENST00000497423 CC2D2BQ6DHV5 1058 aa17.78■□□□□ 0.44
LCLAT1-212ENST00000497423 RTKN2Q8IZC4 609 aa17.78■□□□□ 0.44
LCLAT1-212ENST00000497423 STK31Q9BXU1 1019 aa17.78■□□□□ 0.44
LCLAT1-212ENST00000497423 SPINK5Q9NQ38 1064 aaPredicted RBP17.78■□□□□ 0.44
LCLAT1-212ENST00000497423 KDM2BQ8NHM5 1336 aa17.77■□□□□ 0.44
LCLAT1-212ENST00000497423 ZNF521Q96K83 1311 aa17.77■□□□□ 0.44
LCLAT1-212ENST00000497423 CACNA1FO60840 1977 aa17.77■□□□□ 0.44
LCLAT1-212ENST00000497423 VAMP4O75379 141 aa17.77■□□□□ 0.44
LCLAT1-212ENST00000497423 MIER1Q8N108 512 aa17.77■□□□□ 0.44
LCLAT1-212ENST00000497423 LAMB2P55268 1798 aa17.76■□□□□ 0.43
LCLAT1-212ENST00000497423 SNED1Q8TER0 1413 aa17.76■□□□□ 0.43
LCLAT1-212ENST00000497423 SLC4A2P04920 1241 aa17.76■□□□□ 0.43
LCLAT1-212ENST00000497423 HCLS1P14317 486 aaPredicted RBP17.76■□□□□ 0.43
LCLAT1-212ENST00000497423 FKBP4Q02790 459 aaKnown RBP eCLIP17.76■□□□□ 0.43
LCLAT1-212ENST00000497423 EXOSC9Q06265 439 aaKnown RBP17.76■□□□□ 0.43
LCLAT1-212ENST00000497423 GRIPAP1Q4V328 841 aa17.76■□□□□ 0.43
LCLAT1-212ENST00000497423 METTL22Q9BUU2 404 aaPredicted RBP17.76■□□□□ 0.43
LCLAT1-212ENST00000497423 MYH16Q9H6N6 1097 aa17.76■□□□□ 0.43
LCLAT1-212ENST00000497423 GLTPD2A6NH11 291 aa17.75■□□□□ 0.43
LCLAT1-212ENST00000497423 OLFM4Q6UX06 510 aa17.75■□□□□ 0.43
LCLAT1-212ENST00000497423 KSR2Q6VAB6 950 aa17.75■□□□□ 0.43
LCLAT1-212ENST00000497423 CCDC191Q8NCU4 936 aa17.75■□□□□ 0.43
LCLAT1-212ENST00000497423 FAM89AQ96GI7 184 aa17.75■□□□□ 0.43
LCLAT1-212ENST00000497423 NMRK2Q9NPI5 230 aa17.75■□□□□ 0.43
LCLAT1-212ENST00000497423 TIAM2Q8IVF5 1701 aa17.75■□□□□ 0.43
LCLAT1-212ENST00000497423 PSMD1Q99460 953 aa17.74■□□□□ 0.43
LCLAT1-212ENST00000497423 MYD88Q99836 296 aa17.74■□□□□ 0.43
LCLAT1-212ENST00000497423 DDX60Q8IY21 1712 aaKnown RBP17.74■□□□□ 0.43
LCLAT1-212ENST00000497423 PI4KAP2A4QPH2 592 aa17.73■□□□□ 0.43
LCLAT1-212ENST00000497423 TCERG1O14776 1098 aaKnown RBP17.73■□□□□ 0.43
LCLAT1-212ENST00000497423 BBOX1O75936 387 aa17.73■□□□□ 0.43
LCLAT1-212ENST00000497423 SF3B3Q15393 1217 aaKnown RBP17.73■□□□□ 0.43
LCLAT1-212ENST00000497423 G2E3Q7L622 706 aa17.73■□□□□ 0.43
LCLAT1-212ENST00000497423 PI4KAP1Q8N8J0 262 aa17.73■□□□□ 0.43
LCLAT1-212ENST00000497423 ZBTB38Q8NAP3 1195 aaPredicted RBP17.73■□□□□ 0.43
LCLAT1-212ENST00000497423 MAP3K2Q9Y2U5 619 aa17.73■□□□□ 0.43
LCLAT1-212ENST00000497423 PPEF1O14829 653 aaPredicted RBP17.72■□□□□ 0.43
LCLAT1-212ENST00000497423 DPY19L2Q6NUT2 758 aa17.72■□□□□ 0.43
LCLAT1-212ENST00000497423 ZNF428Q96B54 188 aa17.72■□□□□ 0.43
LCLAT1-212ENST00000497423 ATP6V0A2Q9Y487 856 aa17.72■□□□□ 0.43
LCLAT1-212ENST00000497423 ABCC4O15439 1325 aa17.72■□□□□ 0.43
LCLAT1-212ENST00000497423 IRS4O14654 1257 aaPredicted RBP17.71■□□□□ 0.43
LCLAT1-212ENST00000497423 TOMM70O94826 608 aa17.71■□□□□ 0.43
LCLAT1-212ENST00000497423 PCCAP05165 728 aaPredicted RBP17.71■□□□□ 0.43
LCLAT1-212ENST00000497423 DDX46Q7L014 1031 aaKnown RBP17.71■□□□□ 0.43
LCLAT1-212ENST00000497423 RRAGCQ9HB90 399 aa17.71■□□□□ 0.43
LCLAT1-212ENST00000497423 CWC25Q9NXE8 425 aaPredicted RBP17.71■□□□□ 0.43
LCLAT1-212ENST00000497423 IGKV5-2P06315 115 aa17.7■□□□□ 0.42
LCLAT1-212ENST00000497423 HSP90B1P14625 803 aaKnown RBP17.7■□□□□ 0.42
LCLAT1-212ENST00000497423 FLIIQ13045 1269 aa17.7■□□□□ 0.42
LCLAT1-212ENST00000497423 GRAPQ13588 217 aa17.7■□□□□ 0.42
LCLAT1-212ENST00000497423 SP8Q8IXZ3 490 aa17.7■□□□□ 0.42
LCLAT1-212ENST00000497423 GRAPLQ8TC17 118 aaPredicted RBP17.7■□□□□ 0.42
LCLAT1-212ENST00000497423 ZNF277Q9NRM2 450 aaPredicted RBP17.7■□□□□ 0.42
LCLAT1-212ENST00000497423 IARSP41252 1262 aaKnown RBP17.69■□□□□ 0.42
LCLAT1-212ENST00000497423 NEXNQ0ZGT2 675 aa17.69■□□□□ 0.42
LCLAT1-212ENST00000497423 RTL5Q5HYW3 569 aaPredicted RBP17.69■□□□□ 0.42
LCLAT1-212ENST00000497423 TMX4Q9H1E5 349 aaPredicted RBP17.69■□□□□ 0.42
LCLAT1-212ENST00000497423 TAF1P21675 1872 aa17.69■□□□□ 0.42
LCLAT1-212ENST00000497423 VEGFAP15692 232 aaPredicted RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms