RNA–Protein interactions for RNA: ENST00000497015.5

SRSF4-205, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 2

Gene SRSF4, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-205ENST00000497015 DGKZQ13574 1117 aa13.25□□□□□ -0.29
SRSF4-205ENST00000497015 RTKN2Q8IZC4 609 aa13.25□□□□□ -0.29
SRSF4-205ENST00000497015 POLR3GLQ9BT43 218 aa13.25□□□□□ -0.29
SRSF4-205ENST00000497015 DAXXQ9UER7 740 aaPredicted RBP13.25□□□□□ -0.29
SRSF4-205ENST00000497015 UBR2Q8IWV8 1755 aa13.25□□□□□ -0.29
SRSF4-205ENST00000497015 ARFGEF2Q9Y6D5 1785 aa13.25□□□□□ -0.29
SRSF4-205ENST00000497015 ZNF790Q6PG37 636 aa13.24□□□□□ -0.29
SRSF4-205ENST00000497015 SAPCD2Q86UD0 394 aa13.24□□□□□ -0.29
SRSF4-205ENST00000497015 TSHZ2Q9NRE2 1034 aa13.24□□□□□ -0.29
SRSF4-205ENST00000497015 USP16Q9Y5T5 823 aa13.24□□□□□ -0.29
SRSF4-205ENST00000497015 GJA3Q9Y6H8 435 aa13.24□□□□□ -0.29
SRSF4-205ENST00000497015 SCN7AQ01118 1682 aa13.24□□□□□ -0.29
SRSF4-205ENST00000497015 CASP8AP2Q9UKL3 1982 aa13.23□□□□□ -0.29
SRSF4-205ENST00000497015 PRAMEF22A3QJZ6 481 aa13.23□□□□□ -0.29
SRSF4-205ENST00000497015 MORC1Q86VD1 984 aa13.23□□□□□ -0.29
SRSF4-205ENST00000497015 DZIP3Q86Y13 1208 aaKnown RBP13.23□□□□□ -0.29
SRSF4-205ENST00000497015 NPC1L1Q9UHC9 1359 aa13.22□□□□□ -0.29
SRSF4-205ENST00000497015 TULP1O00294 542 aaPredicted RBP13.22□□□□□ -0.29
SRSF4-205ENST00000497015 CIAPIN1Q6FI81 312 aa13.22□□□□□ -0.29
SRSF4-205ENST00000497015 NBPF5PQ86XG9 351 aaPredicted RBP13.22□□□□□ -0.29
SRSF4-205ENST00000497015 TEX13AQ9BXU3 409 aaPredicted RBP13.22□□□□□ -0.29
SRSF4-205ENST00000497015 KNSTRNQ9Y448 316 aa13.22□□□□□ -0.29
SRSF4-205ENST00000497015 NPHP1O15259 732 aa13.21□□□□□ -0.29
SRSF4-205ENST00000497015 SOX10P56693 466 aa13.21□□□□□ -0.29
SRSF4-205ENST00000497015 USP50Q70EL3 339 aaPredicted RBP13.21□□□□□ -0.29
SRSF4-205ENST00000497015 TTC5Q8N0Z6 440 aa13.21□□□□□ -0.29
SRSF4-205ENST00000497015 PSMD1Q99460 953 aa13.21□□□□□ -0.29
SRSF4-205ENST00000497015 BRPF1P55201 1214 aaPredicted RBP13.2□□□□□ -0.3
SRSF4-205ENST00000497015 CLEC4GQ6UXB4 293 aa13.2□□□□□ -0.3
SRSF4-205ENST00000497015 DLK2Q6UY11 383 aa13.2□□□□□ -0.3
SRSF4-205ENST00000497015 PGAP2Q9UHJ9 254 aa13.2□□□□□ -0.3
SRSF4-205ENST00000497015 FAM177BA6PVY3 158 aa13.19□□□□□ -0.3
SRSF4-205ENST00000497015 PER1O15534 1290 aaPredicted RBP13.19□□□□□ -0.3
SRSF4-205ENST00000497015 CELF2O95319 508 aaKnown RBP13.19□□□□□ -0.3
SRSF4-205ENST00000497015 HIRAP54198 1017 aaPredicted RBP13.19□□□□□ -0.3
SRSF4-205ENST00000497015 EIF6P56537 245 aaKnown RBP13.19□□□□□ -0.3
SRSF4-205ENST00000497015 HLFQ16534 295 aa13.19□□□□□ -0.3
SRSF4-205ENST00000497015 TPTE2Q6XPS3 522 aa13.19□□□□□ -0.3
SRSF4-205ENST00000497015 JDP2Q8WYK2 163 aa13.19□□□□□ -0.3
SRSF4-205ENST00000497015 GLIS2Q9BZE0 524 aaPredicted RBP13.19□□□□□ -0.3
SRSF4-205ENST00000497015 NBPF26B4DH59 902 aa13.18□□□□□ -0.3
SRSF4-205ENST00000497015 CA12O43570 354 aa13.18□□□□□ -0.3
SRSF4-205ENST00000497015 ALDH1B1P30837 517 aa13.18□□□□□ -0.3
SRSF4-205ENST00000497015 NBPF10Q6P3W6 841 aaKnown RBP13.18□□□□□ -0.3
SRSF4-205ENST00000497015 NBPF15Q8N660 670 aa13.18□□□□□ -0.3
SRSF4-205ENST00000497015 HHIPL1Q96JK4 782 aa13.18□□□□□ -0.3
SRSF4-205ENST00000497015 RGL2O15211 777 aa13.17□□□□□ -0.3
SRSF4-205ENST00000497015 LMOD1P29536 600 aaPredicted RBP13.17□□□□□ -0.3
SRSF4-205ENST00000497015 CRY2Q49AN0 593 aa13.17□□□□□ -0.3
SRSF4-205ENST00000497015 FMNL2Q96PY5 1086 aa13.17□□□□□ -0.3
SRSF4-205ENST00000497015 NIP7Q9Y221 180 aaKnown RBP eCLIP13.17□□□□□ -0.3
SRSF4-205ENST00000497015 TRPM7Q96QT4 1865 aa13.16□□□□□ -0.3
SRSF4-205ENST00000497015 GPRC5DQ9NZD1 345 aa13.16□□□□□ -0.3
SRSF4-205ENST00000497015 GTF3C3Q9Y5Q9 886 aa13.16□□□□□ -0.3
SRSF4-205ENST00000497015 BCORQ6W2J9 1755 aa13.15□□□□□ -0.3
SRSF4-205ENST00000497015 FAM155AB1AL88 458 aaPredicted RBP13.15□□□□□ -0.3
SRSF4-205ENST00000497015 CXCL9Q07325 125 aa13.15□□□□□ -0.3
SRSF4-205ENST00000497015 PRPF38BQ5VTL8 546 aaKnown RBP13.15□□□□□ -0.3
SRSF4-205ENST00000497015 LARGE2Q8N3Y3 721 aa13.15□□□□□ -0.3
SRSF4-205ENST00000497015 ADARB2Q9NS39 739 aaKnown RBP13.15□□□□□ -0.3
SRSF4-205ENST00000497015 SHTN1A0MZ66 631 aa13.14□□□□□ -0.31
SRSF4-205ENST00000497015 GNAT3A8MTJ3 354 aa13.14□□□□□ -0.31
SRSF4-205ENST00000497015 TEFQ10587 303 aa13.14□□□□□ -0.31
SRSF4-205ENST00000497015 NUTM1Q86Y26 1132 aa13.14□□□□□ -0.31
SRSF4-205ENST00000497015 PDE4DIPQ5VU43 2346 aa13.14□□□□□ -0.31
SRSF4-205ENST00000497015 CEMIPQ8WUJ3 1361 aa13.13□□□□□ -0.31
SRSF4-205ENST00000497015 ABCC12Q96J65 1359 aa13.13□□□□□ -0.31
SRSF4-205ENST00000497015 TCERG1O14776 1098 aaKnown RBP13.13□□□□□ -0.31
SRSF4-205ENST00000497015 HOXA10P31260 410 aaPredicted RBP13.13□□□□□ -0.31
SRSF4-205ENST00000497015 C3orf67Q6ZVT6 689 aa13.13□□□□□ -0.31
SRSF4-205ENST00000497015 SIPA1L3O60292 1781 aaPredicted RBP13.12□□□□□ -0.31
SRSF4-205ENST00000497015 BTBD11A6QL63 1104 aa13.12□□□□□ -0.31
SRSF4-205ENST00000497015 GMPSP49915 693 aaPredicted RBP13.12□□□□□ -0.31
SRSF4-205ENST00000497015 AOC3Q16853 763 aa13.12□□□□□ -0.31
SRSF4-205ENST00000497015 CC2D2BQ6DHV5 1058 aa13.12□□□□□ -0.31
SRSF4-205ENST00000497015 NPM2Q86SE8 214 aaKnown RBP13.12□□□□□ -0.31
SRSF4-205ENST00000497015 TRPM4Q8TD43 1214 aa13.12□□□□□ -0.31
SRSF4-205ENST00000497015 PHACTR3Q96KR7 559 aa13.12□□□□□ -0.31
SRSF4-205ENST00000497015 ZNF408Q9H9D4 720 aa13.12□□□□□ -0.31
SRSF4-205ENST00000497015 RNF186Q9NXI6 227 aa13.12□□□□□ -0.31
SRSF4-205ENST00000497015 DIAPH1O60610 1272 aaKnown RBP13.11□□□□□ -0.31
SRSF4-205ENST00000497015 NOGQ13253 232 aa13.11□□□□□ -0.31
SRSF4-205ENST00000497015 USP48Q86UV5 1035 aa13.11□□□□□ -0.31
SRSF4-205ENST00000497015 TRPA1O75762 1119 aa13.1□□□□□ -0.31
SRSF4-205ENST00000497015 KIF23Q02241 960 aaPredicted RBP13.1□□□□□ -0.31
SRSF4-205ENST00000497015 CDC37L1Q7L3B6 337 aa13.1□□□□□ -0.31
SRSF4-205ENST00000497015 NIM1KQ8IY84 436 aa13.1□□□□□ -0.31
SRSF4-205ENST00000497015 ZNF652Q9Y2D9 606 aa13.1□□□□□ -0.31
SRSF4-205ENST00000497015 PPIP5K2O43314 1243 aa13.09□□□□□ -0.31
SRSF4-205ENST00000497015 SNRPA1P09661 255 aaKnown RBP13.09□□□□□ -0.31
SRSF4-205ENST00000497015 HUNKP57058 714 aa13.09□□□□□ -0.31
SRSF4-205ENST00000497015 ZC3H15Q8WU90 426 aaKnown RBP13.09□□□□□ -0.31
SRSF4-205ENST00000497015 CRAMP1Q96RY5 1269 aa13.09□□□□□ -0.31
SRSF4-205ENST00000497015 GTF2E1P29083 439 aaPredicted RBP13.08□□□□□ -0.32
SRSF4-205ENST00000497015 SUSD4Q5VX71 490 aa13.08□□□□□ -0.32
SRSF4-205ENST00000497015 CSRNP1Q96S65 589 aa13.08□□□□□ -0.32
SRSF4-205ENST00000497015 ZNRF3Q9ULT6 936 aa13.08□□□□□ -0.32
SRSF4-205ENST00000497015 UBN2Q6ZU65 1347 aa13.08□□□□□ -0.32
SRSF4-205ENST00000497015 YDJCA8MPS7 323 aa13.07□□□□□ -0.32
SRSF4-205ENST00000497015 PPEF1O14829 653 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms