RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 DNAJC5GQ8N7S2 189 aa16.92■□□□□ 0.3
FN1-226ENST00000496542 ANKRD36CQ5JPF3 1778 aa16.92■□□□□ 0.3
FN1-226ENST00000496542 PARP10Q53GL7 1025 aa16.91■□□□□ 0.3
FN1-226ENST00000496542 PPP1R42Q7Z4L9 355 aa16.91■□□□□ 0.3
FN1-226ENST00000496542 XAGE3Q8WTP9 111 aa16.91■□□□□ 0.3
FN1-226ENST00000496542 COPS6Q7L5N1 327 aa16.9■□□□□ 0.3
FN1-226ENST00000496542 SYNE4Q8N205 404 aa16.9■□□□□ 0.3
FN1-226ENST00000496542 HOXA10P31260 410 aaPredicted RBP16.89■□□□□ 0.29
FN1-226ENST00000496542 C3orf67Q6ZVT6 689 aa16.89■□□□□ 0.29
FN1-226ENST00000496542 RBM17Q96I25 401 aaKnown RBP16.89■□□□□ 0.29
FN1-226ENST00000496542 UTP14AQ9BVJ6 771 aaKnown RBP16.89■□□□□ 0.29
FN1-226ENST00000496542 DDX21Q9NR30 783 aaKnown RBP eCLIP16.89■□□□□ 0.29
FN1-226ENST00000496542 ZNF541Q9H0D2 1346 aa16.89■□□□□ 0.29
FN1-226ENST00000496542 TCERG1O14776 1098 aaKnown RBP16.88■□□□□ 0.29
FN1-226ENST00000496542 IARSP41252 1262 aaKnown RBP16.88■□□□□ 0.29
FN1-226ENST00000496542 HDGFL1Q5TGJ6 251 aa16.88■□□□□ 0.29
FN1-226ENST00000496542 KLRG1Q96E93 195 aa16.88■□□□□ 0.29
FN1-226ENST00000496542 CHPF2Q9P2E5 772 aa16.88■□□□□ 0.29
FN1-226ENST00000496542 SNED1Q8TER0 1413 aa16.87■□□□□ 0.29
FN1-226ENST00000496542 SCN4AP35499 1836 aa16.87■□□□□ 0.29
FN1-226ENST00000496542 PPEF1O14829 653 aaPredicted RBP16.87■□□□□ 0.29
FN1-226ENST00000496542 HSP90AB3PQ58FF7 597 aa16.87■□□□□ 0.29
FN1-226ENST00000496542 SLC51AQ86UW1 340 aa16.87■□□□□ 0.29
FN1-226ENST00000496542 NLRP3Q96P20 1036 aa16.87■□□□□ 0.29
FN1-226ENST00000496542 CRAMP1Q96RY5 1269 aa16.87■□□□□ 0.29
FN1-226ENST00000496542 LAMB2P55268 1798 aa16.87■□□□□ 0.29
FN1-226ENST00000496542 IQCA1LA6NCM1 817 aa16.86■□□□□ 0.29
FN1-226ENST00000496542 POTEIP0CG38 1075 aa16.86■□□□□ 0.29
FN1-226ENST00000496542 POTEJP0CG39 1038 aa16.86■□□□□ 0.29
FN1-226ENST00000496542 CC2D2BQ6DHV5 1058 aa16.86■□□□□ 0.29
FN1-226ENST00000496542 NLRP10Q86W26 655 aa16.86■□□□□ 0.29
FN1-226ENST00000496542 L3MBTL3Q96JM7 780 aaPredicted RBP16.86■□□□□ 0.29
FN1-226ENST00000496542 CFAP44Q96MT7 982 aa16.86■□□□□ 0.29
FN1-226ENST00000496542 PSMD1Q99460 953 aa16.86■□□□□ 0.29
FN1-226ENST00000496542 APAF1O14727 1248 aa16.85■□□□□ 0.29
FN1-226ENST00000496542 HOXB7P09629 217 aa16.85■□□□□ 0.29
FN1-226ENST00000496542 CHADLQ6NUI6 762 aa16.85■□□□□ 0.29
FN1-226ENST00000496542 ZNF428Q96B54 188 aa16.85■□□□□ 0.29
FN1-226ENST00000496542 MBIPQ9NS73 344 aa16.85■□□□□ 0.29
FN1-226ENST00000496542 RNF123Q5XPI4 1314 aa16.85■□□□□ 0.29
FN1-226ENST00000496542 HCLS1P14317 486 aaPredicted RBP16.84■□□□□ 0.29
FN1-226ENST00000496542 TCIRG1Q13488 830 aa16.84■□□□□ 0.29
FN1-226ENST00000496542 SLC10A5Q5PT55 438 aa16.84■□□□□ 0.29
FN1-226ENST00000496542 DUSP27Q5VZP5 1158 aa16.84■□□□□ 0.29
FN1-226ENST00000496542 JDP2Q8WYK2 163 aa16.84■□□□□ 0.29
FN1-226ENST00000496542 TRMT112Q9UI30 125 aaKnown RBP16.84■□□□□ 0.29
FN1-226ENST00000496542 FZD9O00144 591 aa16.83■□□□□ 0.28
FN1-226ENST00000496542 ABCC4O15439 1325 aa16.83■□□□□ 0.28
FN1-226ENST00000496542 PCNTO95613 3336 aa16.83■□□□□ 0.28
FN1-226ENST00000496542 COL4A5P29400 1685 aa16.83■□□□□ 0.28
FN1-226ENST00000496542 TAF1DQ9H5J8 278 aaPredicted RBP16.83■□□□□ 0.28
FN1-226ENST00000496542 DBF4Q9UBU7 674 aaPredicted RBP16.83■□□□□ 0.28
FN1-226ENST00000496542 SH3TC1Q8TE82 1336 aa16.82■□□□□ 0.28
FN1-226ENST00000496542 GRIPAP1Q4V328 841 aa16.82■□□□□ 0.28
FN1-226ENST00000496542 EAPPQ56P03 285 aaPredicted RBP16.82■□□□□ 0.28
FN1-226ENST00000496542 LARGE2Q8N3Y3 721 aa16.82■□□□□ 0.28
FN1-226ENST00000496542 PLBD2Q8NHP8 589 aa16.82■□□□□ 0.28
FN1-226ENST00000496542 TMX4Q9H1E5 349 aaPredicted RBP16.82■□□□□ 0.28
FN1-226ENST00000496542 HACL1Q9UJ83 578 aa16.82■□□□□ 0.28
FN1-226ENST00000496542 ZNF853P0CG23 659 aa16.81■□□□□ 0.28
FN1-226ENST00000496542 CALD1Q05682 793 aaKnown RBP16.81■□□□□ 0.28
FN1-226ENST00000496542 ANKRD13DQ6ZTN6 518 aa16.81■□□□□ 0.28
FN1-226ENST00000496542 LDHDQ86WU2 507 aa16.81■□□□□ 0.28
FN1-226ENST00000496542 JMYQ8N9B5 988 aa16.81■□□□□ 0.28
FN1-226ENST00000496542 IFT57Q9NWB7 429 aa16.81■□□□□ 0.28
FN1-226ENST00000496542 HYPKQ9NX55 129 aa16.81■□□□□ 0.28
FN1-226ENST00000496542 TAF1P21675 1872 aa16.8■□□□□ 0.28
FN1-226ENST00000496542 EIF6P56537 245 aaKnown RBP16.8■□□□□ 0.28
FN1-226ENST00000496542 GNAI1P63096 354 aa16.8■□□□□ 0.28
FN1-226ENST00000496542 GPC2Q8N158 579 aa16.8■□□□□ 0.28
FN1-226ENST00000496542 ATP6V0A2Q9Y487 856 aa16.8■□□□□ 0.28
FN1-226ENST00000496542 GJA3Q9Y6H8 435 aa16.8■□□□□ 0.28
FN1-226ENST00000496542 DDX60Q8IY21 1712 aaKnown RBP16.79■□□□□ 0.28
FN1-226ENST00000496542 ATP5J2-PTCD1G3V325 749 aa16.79■□□□□ 0.28
FN1-226ENST00000496542 ELL2O00472 640 aaPredicted RBP16.79■□□□□ 0.28
FN1-226ENST00000496542 PPIP5K2O43314 1243 aa16.79■□□□□ 0.28
FN1-226ENST00000496542 EPHX2P34913 555 aa16.79■□□□□ 0.28
FN1-226ENST00000496542 DDX46Q7L014 1031 aaKnown RBP16.79■□□□□ 0.28
FN1-226ENST00000496542 NIM1KQ8IY84 436 aa16.79■□□□□ 0.28
FN1-226ENST00000496542 CLEC11AQ9Y240 323 aa16.79■□□□□ 0.28
FN1-226ENST00000496542 BBOX1O75936 387 aa16.78■□□□□ 0.28
FN1-226ENST00000496542 AOC3Q16853 763 aa16.78■□□□□ 0.28
FN1-226ENST00000496542 IFFO2Q5TF58 517 aa16.78■□□□□ 0.28
FN1-226ENST00000496542 ISCA1Q9BUE6 129 aa16.78■□□□□ 0.28
FN1-226ENST00000496542 ADAMTSL1Q8N6G6 1762 aa16.77■□□□□ 0.28
FN1-226ENST00000496542 GOLGA2Q08379 1002 aa16.77■□□□□ 0.28
FN1-226ENST00000496542 GRAPQ13588 217 aa16.77■□□□□ 0.28
FN1-226ENST00000496542 CCDC184Q52MB2 194 aa16.77■□□□□ 0.28
FN1-226ENST00000496542 GRAPLQ8TC17 118 aaPredicted RBP16.77■□□□□ 0.28
FN1-226ENST00000496542 FAM89AQ96GI7 184 aa16.77■□□□□ 0.28
FN1-226ENST00000496542 LMOD1P29536 600 aaPredicted RBP16.76■□□□□ 0.27
FN1-226ENST00000496542 RTL5Q5HYW3 569 aaPredicted RBP16.76■□□□□ 0.27
FN1-226ENST00000496542 DPP8Q6V1X1 898 aaPredicted RBP16.76■□□□□ 0.27
FN1-226ENST00000496542 RIC3Q7Z5B4 369 aa16.76■□□□□ 0.27
FN1-226ENST00000496542 PNMA8AQ86V59 439 aaPredicted RBP16.76■□□□□ 0.27
FN1-226ENST00000496542 SUPT20HQ8NEM7 779 aa16.76■□□□□ 0.27
FN1-226ENST00000496542 CREBZFQ9NS37 354 aa16.76■□□□□ 0.27
FN1-226ENST00000496542 LTBP1Q14766 1721 aa16.76■□□□□ 0.27
FN1-226ENST00000496542 PASKQ96RG2 1323 aa16.75■□□□□ 0.27
FN1-226ENST00000496542 SP8Q8IXZ3 490 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms