RNA–Protein interactions for RNA: ENST00000496465.1

TM2D1-211, Transcript of TM2 domain containing 1, humanhuman

TSL 2

Gene TM2D1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D1-211ENST00000496465 XAGE3Q8WTP9 111 aa23.74■■□□□ 1.39
TM2D1-211ENST00000496465 RTKN2Q8IZC4 609 aa23.73■■□□□ 1.39
TM2D1-211ENST00000496465 FKBP4Q02790 459 aaKnown RBP eCLIP23.72■■□□□ 1.39
TM2D1-211ENST00000496465 HSP90AB3PQ58FF7 597 aa23.72■■□□□ 1.39
TM2D1-211ENST00000496465 MBIPQ9NS73 344 aa23.72■■□□□ 1.39
TM2D1-211ENST00000496465 CHPF2Q9P2E5 772 aa23.72■■□□□ 1.39
TM2D1-211ENST00000496465 LAMB2P55268 1798 aa23.71■■□□□ 1.39
TM2D1-211ENST00000496465 SNED1Q8TER0 1413 aa23.71■■□□□ 1.39
TM2D1-211ENST00000496465 RNF123Q5XPI4 1314 aa23.71■■□□□ 1.39
TM2D1-211ENST00000496465 POTECB2RU33 542 aa23.71■■□□□ 1.39
TM2D1-211ENST00000496465 AIMP1Q12904 312 aaKnown RBP23.71■■□□□ 1.39
TM2D1-211ENST00000496465 SLC10A5Q5PT55 438 aa23.71■■□□□ 1.39
TM2D1-211ENST00000496465 HDGFL1Q5TGJ6 251 aa23.71■■□□□ 1.39
TM2D1-211ENST00000496465 OLFM4Q6UX06 510 aa23.71■■□□□ 1.39
TM2D1-211ENST00000496465 UTP14AQ9BVJ6 771 aaKnown RBP23.71■■□□□ 1.39
TM2D1-211ENST00000496465 CALD1Q05682 793 aaKnown RBP23.7■■□□□ 1.38
TM2D1-211ENST00000496465 RPGRQ92834 1020 aaKnown RBP23.7■■□□□ 1.38
TM2D1-211ENST00000496465 CRAMP1Q96RY5 1269 aa23.7■■□□□ 1.38
TM2D1-211ENST00000496465 IFT57Q9NWB7 429 aa23.7■■□□□ 1.38
TM2D1-211ENST00000496465 DBF4Q9UBU7 674 aaPredicted RBP23.7■■□□□ 1.38
TM2D1-211ENST00000496465 TCIRG1Q13488 830 aa23.69■■□□□ 1.38
TM2D1-211ENST00000496465 DUSP27Q5VZP5 1158 aa23.69■■□□□ 1.38
TM2D1-211ENST00000496465 SMC1BQ8NDV3 1235 aa23.69■■□□□ 1.38
TM2D1-211ENST00000496465 GNAI1P63096 354 aa23.68■■□□□ 1.38
TM2D1-211ENST00000496465 CCDC184Q52MB2 194 aa23.68■■□□□ 1.38
TM2D1-211ENST00000496465 CC2D2BQ6DHV5 1058 aa23.68■■□□□ 1.38
TM2D1-211ENST00000496465 C3orf67Q6ZVT6 689 aa23.68■■□□□ 1.38
TM2D1-211ENST00000496465 NLRP10Q86W26 655 aa23.68■■□□□ 1.38
TM2D1-211ENST00000496465 RBM17Q96I25 401 aaKnown RBP23.68■■□□□ 1.38
TM2D1-211ENST00000496465 NLRP3Q96P20 1036 aa23.68■■□□□ 1.38
TM2D1-211ENST00000496465 PSMD1Q99460 953 aa23.67■■□□□ 1.38
TM2D1-211ENST00000496465 ZNF277Q9NRM2 450 aaPredicted RBP23.67■■□□□ 1.38
TM2D1-211ENST00000496465 SCN4AP35499 1836 aa23.66■■□□□ 1.38
TM2D1-211ENST00000496465 GRIPAP1Q4V328 841 aa23.66■■□□□ 1.38
TM2D1-211ENST00000496465 PLBD2Q8NHP8 589 aa23.66■■□□□ 1.38
TM2D1-211ENST00000496465 HYPKQ9NX55 129 aa23.66■■□□□ 1.38
TM2D1-211ENST00000496465 ZNF316A6NFI3 1004 aaPredicted RBP23.65■■□□□ 1.38
TM2D1-211ENST00000496465 DDNO94850 711 aaPredicted RBP23.65■■□□□ 1.38
TM2D1-211ENST00000496465 ANKRD13DQ6ZTN6 518 aa23.65■■□□□ 1.38
TM2D1-211ENST00000496465 SYNE4Q8N205 404 aa23.65■■□□□ 1.38
TM2D1-211ENST00000496465 DNAJC5GQ8N7S2 189 aa23.64■■□□□ 1.37
TM2D1-211ENST00000496465 IARSP41252 1262 aaKnown RBP23.63■■□□□ 1.37
TM2D1-211ENST00000496465 DDX60Q8IY21 1712 aaKnown RBP23.62■■□□□ 1.37
TM2D1-211ENST00000496465 L3MBTL3Q96JM7 780 aaPredicted RBP23.62■■□□□ 1.37
TM2D1-211ENST00000496465 TRMT112Q9UI30 125 aaKnown RBP23.62■■□□□ 1.37
TM2D1-211ENST00000496465 SH3TC1Q8TE82 1336 aa23.61■■□□□ 1.37
TM2D1-211ENST00000496465 PPEF1O14829 653 aaPredicted RBP23.61■■□□□ 1.37
TM2D1-211ENST00000496465 ISCA1Q9BUE6 129 aa23.61■■□□□ 1.37
TM2D1-211ENST00000496465 TAF1P21675 1872 aa23.6■■□□□ 1.37
TM2D1-211ENST00000496465 FZD9O00144 591 aa23.6■■□□□ 1.37
TM2D1-211ENST00000496465 HCLS1P14317 486 aaPredicted RBP23.6■■□□□ 1.37
TM2D1-211ENST00000496465 CCDC27Q2M243 656 aa23.6■■□□□ 1.37
TM2D1-211ENST00000496465 ZNF541Q9H0D2 1346 aa23.59■■□□□ 1.37
TM2D1-211ENST00000496465 C8orf58Q8NAV2 365 aa23.59■■□□□ 1.37
TM2D1-211ENST00000496465 ATP6V0A2Q9Y487 856 aa23.59■■□□□ 1.37
TM2D1-211ENST00000496465 ABCC4O15439 1325 aa23.59■■□□□ 1.37
TM2D1-211ENST00000496465 COL4A5P29400 1685 aa23.58■■□□□ 1.37
TM2D1-211ENST00000496465 IQCA1LA6NCM1 817 aa23.58■■□□□ 1.37
TM2D1-211ENST00000496465 ELL2O00472 640 aaPredicted RBP23.58■■□□□ 1.37
TM2D1-211ENST00000496465 TRIM28Q13263 835 aaKnown RBP23.58■■□□□ 1.37
TM2D1-211ENST00000496465 ANP32CO43423 234 aa23.57■■□□□ 1.36
TM2D1-211ENST00000496465 BBOX1O75936 387 aa23.57■■□□□ 1.36
TM2D1-211ENST00000496465 NCBP3Q53F19 620 aaKnown RBP23.57■■□□□ 1.36
TM2D1-211ENST00000496465 SLC51AQ86UW1 340 aa23.57■■□□□ 1.36
TM2D1-211ENST00000496465 JDP2Q8WYK2 163 aa23.57■■□□□ 1.36
TM2D1-211ENST00000496465 CHMP4AQ9BY43 222 aa23.57■■□□□ 1.36
TM2D1-211ENST00000496465 TCERG1O14776 1098 aaKnown RBP23.56■■□□□ 1.36
TM2D1-211ENST00000496465 PHAXQ9H814 394 aaKnown RBP23.56■■□□□ 1.36
TM2D1-211ENST00000496465 MRS2Q9HD23 443 aa23.56■■□□□ 1.36
TM2D1-211ENST00000496465 ATP5J2-PTCD1G3V325 749 aa23.55■■□□□ 1.36
TM2D1-211ENST00000496465 HTRA3P83110 453 aa23.55■■□□□ 1.36
TM2D1-211ENST00000496465 WWC1Q8IX03 1113 aa23.55■■□□□ 1.36
TM2D1-211ENST00000496465 TMX4Q9H1E5 349 aaPredicted RBP23.55■■□□□ 1.36
TM2D1-211ENST00000496465 GOLGA2Q08379 1002 aa23.54■■□□□ 1.36
TM2D1-211ENST00000496465 CHADLQ6NUI6 762 aa23.54■■□□□ 1.36
TM2D1-211ENST00000496465 DDX46Q7L014 1031 aaKnown RBP23.54■■□□□ 1.36
TM2D1-211ENST00000496465 SP8Q8IXZ3 490 aa23.54■■□□□ 1.36
TM2D1-211ENST00000496465 GPC2Q8N158 579 aa23.54■■□□□ 1.36
TM2D1-211ENST00000496465 FAM89AQ96GI7 184 aa23.54■■□□□ 1.36
TM2D1-211ENST00000496465 VPS33BQ9H267 617 aa23.54■■□□□ 1.36
TM2D1-211ENST00000496465 TAF1DQ9H5J8 278 aaPredicted RBP23.54■■□□□ 1.36
TM2D1-211ENST00000496465 LRRC37AA6NMS7 1700 aa23.53■■□□□ 1.36
TM2D1-211ENST00000496465 GRAPQ13588 217 aa23.53■■□□□ 1.36
TM2D1-211ENST00000496465 CCDC30Q5VVM6 783 aa23.53■■□□□ 1.36
TM2D1-211ENST00000496465 RIC3Q7Z5B4 369 aa23.53■■□□□ 1.36
TM2D1-211ENST00000496465 GRAPLQ8TC17 118 aaPredicted RBP23.53■■□□□ 1.36
TM2D1-211ENST00000496465 RTFDC1Q9BY42 306 aaPredicted RBP23.53■■□□□ 1.36
TM2D1-211ENST00000496465 POTEIP0CG38 1075 aa23.52■■□□□ 1.36
TM2D1-211ENST00000496465 POTEJP0CG39 1038 aa23.52■■□□□ 1.36
TM2D1-211ENST00000496465 SF3B3Q15393 1217 aaKnown RBP23.52■■□□□ 1.36
TM2D1-211ENST00000496465 LARGE2Q8N3Y3 721 aa23.52■■□□□ 1.36
TM2D1-211ENST00000496465 TSPYL6Q8N831 410 aa23.52■■□□□ 1.36
TM2D1-211ENST00000496465 ZNF428Q96B54 188 aa23.52■■□□□ 1.36
TM2D1-211ENST00000496465 KLRG1Q96E93 195 aa23.52■■□□□ 1.36
TM2D1-211ENST00000496465 IL16Q14005 1332 aa23.52■■□□□ 1.36
TM2D1-211ENST00000496465 ADAMTSL1Q8N6G6 1762 aa23.52■■□□□ 1.36
TM2D1-211ENST00000496465 TMC4Q7Z404 712 aa23.51■■□□□ 1.35
TM2D1-211ENST00000496465 TSR2Q969E8 191 aaKnown RBP23.51■■□□□ 1.35
TM2D1-211ENST00000496465 HACL1Q9UJ83 578 aa23.51■■□□□ 1.35
TM2D1-211ENST00000496465 CACNA1FO60840 1977 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms