RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 NBPF11Q86T75 865 aa7.93□□□□□ -1.14
CLK1-214ENST00000496205 TRIM50Q86XT4 487 aa7.93□□□□□ -1.14
CLK1-214ENST00000496205 ADAMTS19Q8TE59 1207 aa7.93□□□□□ -1.14
CLK1-214ENST00000496205 POM121Q96HA1 1249 aa7.93□□□□□ -1.14
CLK1-214ENST00000496205 UBE2OQ9C0C9 1292 aaKnown RBP7.93□□□□□ -1.14
CLK1-214ENST00000496205 JPH1Q9HDC5 661 aaPredicted RBP7.93□□□□□ -1.14
CLK1-214ENST00000496205 AFF1P51825 1210 aaKnown RBP7.92□□□□□ -1.14
CLK1-214ENST00000496205 LRP8Q14114 963 aa7.92□□□□□ -1.14
CLK1-214ENST00000496205 TMEM132AQ24JP5 1023 aa7.92□□□□□ -1.14
CLK1-214ENST00000496205 TSEN2Q8NCE0 465 aaKnown RBP7.92□□□□□ -1.14
CLK1-214ENST00000496205 TP53INP1Q96A56 240 aa7.92□□□□□ -1.14
CLK1-214ENST00000496205 SSBP4Q9BWG4 385 aaPredicted RBP7.92□□□□□ -1.14
CLK1-214ENST00000496205 NAGPAQ9UK23 515 aa7.92□□□□□ -1.14
CLK1-214ENST00000496205 NRG1Q02297 640 aaPredicted RBP7.91□□□□□ -1.14
CLK1-214ENST00000496205 BTLAQ7Z6A9 289 aa7.91□□□□□ -1.14
CLK1-214ENST00000496205 DMRTC2Q8IXT2 367 aaPredicted RBP7.91□□□□□ -1.14
CLK1-214ENST00000496205 USP17L3A6NCW0 530 aa7.9□□□□□ -1.14
CLK1-214ENST00000496205 USP17L4A6NCW7 530 aa7.9□□□□□ -1.14
CLK1-214ENST00000496205 POM121CA8CG34 1229 aa7.9□□□□□ -1.14
CLK1-214ENST00000496205 PPP1R12BO60237 982 aaPredicted RBP7.9□□□□□ -1.14
CLK1-214ENST00000496205 DKK1O94907 266 aa7.9□□□□□ -1.14
CLK1-214ENST00000496205 RAC1P63000 192 aa7.9□□□□□ -1.14
CLK1-214ENST00000496205 PSAPL1Q6NUJ1 521 aa7.9□□□□□ -1.14
CLK1-214ENST00000496205 USP17L2Q6R6M4 530 aa7.9□□□□□ -1.14
CLK1-214ENST00000496205 USP17L1Q7RTZ2 530 aa7.9□□□□□ -1.14
CLK1-214ENST00000496205 PLEKHM2Q8IWE5 1019 aa7.9□□□□□ -1.14
CLK1-214ENST00000496205 ALDH16A1Q8IZ83 802 aa7.9□□□□□ -1.14
CLK1-214ENST00000496205 FMR1NBQ8N0W7 255 aaPredicted RBP7.9□□□□□ -1.14
CLK1-214ENST00000496205 GSX2Q9BZM3 304 aa7.9□□□□□ -1.14
CLK1-214ENST00000496205 DNAJB12Q9NXW2 375 aaKnown RBP7.9□□□□□ -1.14
CLK1-214ENST00000496205 M0R2N6 131 aa7.89□□□□□ -1.15
CLK1-214ENST00000496205 ATP1A2P50993 1020 aa7.89□□□□□ -1.15
CLK1-214ENST00000496205 OGFOD1Q8N543 542 aa7.89□□□□□ -1.15
CLK1-214ENST00000496205 UCN2Q96RP3 112 aa7.89□□□□□ -1.15
CLK1-214ENST00000496205 TIMELESSQ9UNS1 1208 aa7.89□□□□□ -1.15
CLK1-214ENST00000496205 CHMP3Q9Y3E7 222 aa7.89□□□□□ -1.15
CLK1-214ENST00000496205 LARGE2Q8N3Y3 721 aa7.88□□□□□ -1.15
CLK1-214ENST00000496205 USP21Q9UK80 565 aa7.88□□□□□ -1.15
CLK1-214ENST00000496205 GTF3C3Q9Y5Q9 886 aa7.88□□□□□ -1.15
CLK1-214ENST00000496205 ATAD2Q6PL18 1390 aa7.87□□□□□ -1.15
CLK1-214ENST00000496205 C2orf49Q9BVC5 232 aaPredicted RBP7.87□□□□□ -1.15
CLK1-214ENST00000496205 MKRN1Q9UHC7 482 aaKnown RBP7.87□□□□□ -1.15
CLK1-214ENST00000496205 PALM3A6NDB9 673 aaPredicted RBP7.86□□□□□ -1.15
CLK1-214ENST00000496205 RGS9O75916 674 aaPredicted RBP7.86□□□□□ -1.15
CLK1-214ENST00000496205 NFKB1P19838 968 aa7.86□□□□□ -1.15
CLK1-214ENST00000496205 GRNP28799 593 aaKnown RBP7.86□□□□□ -1.15
CLK1-214ENST00000496205 PLAURQ03405 335 aa7.86□□□□□ -1.15
CLK1-214ENST00000496205 SIX5Q8N196 739 aa7.86□□□□□ -1.15
CLK1-214ENST00000496205 NGLY1Q96IV0 654 aa7.86□□□□□ -1.15
CLK1-214ENST00000496205 ZNF594Q96JF6 807 aaPredicted RBP7.86□□□□□ -1.15
CLK1-214ENST00000496205 BCS1LQ9Y276 419 aa7.86□□□□□ -1.15
CLK1-214ENST00000496205 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.86□□□□□ -1.15
CLK1-214ENST00000496205 GRIK5Q16478 980 aa7.85□□□□□ -1.15
CLK1-214ENST00000496205 WFDC12Q8WWY7 111 aa7.85□□□□□ -1.15
CLK1-214ENST00000496205 EFCC1Q9HA90 598 aa7.85□□□□□ -1.15
CLK1-214ENST00000496205 DMGDHQ9UI17 866 aaKnown RBP7.85□□□□□ -1.15
CLK1-214ENST00000496205 ATP9BO43861 1147 aa7.84□□□□□ -1.15
CLK1-214ENST00000496205 CCINQ13939 588 aa7.84□□□□□ -1.15
CLK1-214ENST00000496205 HDGFL1Q5TGJ6 251 aa7.84□□□□□ -1.15
CLK1-214ENST00000496205 MSL1Q68DK7 614 aa7.84□□□□□ -1.15
CLK1-214ENST00000496205 KRTAP19-1Q8IUB9 90 aa7.84□□□□□ -1.15
CLK1-214ENST00000496205 STAG2Q8N3U4 1231 aa7.84□□□□□ -1.15
CLK1-214ENST00000496205 CHMP7Q8WUX9 453 aaPredicted RBP7.84□□□□□ -1.15
CLK1-214ENST00000496205 SCG3Q8WXD2 468 aaKnown RBP7.84□□□□□ -1.15
CLK1-214ENST00000496205 ZBTB42B2RXF5 422 aa7.83□□□□□ -1.16
CLK1-214ENST00000496205 NOS3P29474 1203 aa7.83□□□□□ -1.16
CLK1-214ENST00000496205 IREB2P48200 963 aaKnown RBP7.83□□□□□ -1.16
CLK1-214ENST00000496205 FAM35AQ86V20 835 aa7.83□□□□□ -1.16
CLK1-214ENST00000496205 FBXO11Q86XK2 927 aa7.83□□□□□ -1.16
CLK1-214ENST00000496205 GAS2L2Q8NHY3 880 aa7.83□□□□□ -1.16
CLK1-214ENST00000496205 PNMA5Q96PV4 448 aa7.83□□□□□ -1.16
CLK1-214ENST00000496205 LPIN3Q9BQK8 851 aa7.83□□□□□ -1.16
CLK1-214ENST00000496205 CPB1P15086 417 aa7.82□□□□□ -1.16
CLK1-214ENST00000496205 IER5Q5VY09 327 aa7.82□□□□□ -1.16
CLK1-214ENST00000496205 WWC1Q8IX03 1113 aa7.82□□□□□ -1.16
CLK1-214ENST00000496205 KRTAP9-9Q9BYP9 154 aa7.82□□□□□ -1.16
CLK1-214ENST00000496205 KRTAP9-4Q9BYQ2 154 aa7.82□□□□□ -1.16
CLK1-214ENST00000496205 ZFATQ9P243 1243 aa7.82□□□□□ -1.16
CLK1-214ENST00000496205 LGR5O75473 907 aa7.81□□□□□ -1.16
CLK1-214ENST00000496205 PERM1Q5SV97 790 aa7.81□□□□□ -1.16
CLK1-214ENST00000496205 MEGF10Q96KG7 1140 aa7.81□□□□□ -1.16
CLK1-214ENST00000496205 TGFBR3LH3BV60 316 aa7.8□□□□□ -1.16
CLK1-214ENST00000496205 HIF1AQ16665 826 aa7.8□□□□□ -1.16
CLK1-214ENST00000496205 RTN1Q16799 776 aa7.8□□□□□ -1.16
CLK1-214ENST00000496205 DTWD1Q8N5C7 304 aa7.8□□□□□ -1.16
CLK1-214ENST00000496205 RNF112Q9ULX5 631 aa7.8□□□□□ -1.16
CLK1-214ENST00000496205 DEAF1O75398 565 aaPredicted RBP7.79□□□□□ -1.16
CLK1-214ENST00000496205 TARSP26639 723 aaKnown RBP7.79□□□□□ -1.16
CLK1-214ENST00000496205 INPP5BP32019 993 aa7.79□□□□□ -1.16
CLK1-214ENST00000496205 MLLT1Q03111 559 aaPredicted RBP7.79□□□□□ -1.16
CLK1-214ENST00000496205 FRRS1LQ9P0K9 344 aa7.79□□□□□ -1.16
CLK1-214ENST00000496205 MAP3K6O95382 1288 aa7.78□□□□□ -1.16
CLK1-214ENST00000496205 KRT25Q7Z3Z0 450 aa7.78□□□□□ -1.16
CLK1-214ENST00000496205 TRPM4Q8TD43 1214 aa7.78□□□□□ -1.16
CLK1-214ENST00000496205 IFT43Q96FT9 208 aa7.78□□□□□ -1.16
CLK1-214ENST00000496205 KLK14Q9P0G3 267 aa7.78□□□□□ -1.16
CLK1-214ENST00000496205 RBM19Q9Y4C8 960 aaKnown RBP7.78□□□□□ -1.16
CLK1-214ENST00000496205 RAD21O60216 631 aa7.77□□□□□ -1.17
CLK1-214ENST00000496205 RASA1P20936 1047 aa7.77□□□□□ -1.17
CLK1-214ENST00000496205 SEC13P55735 322 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 586.7 ms