RNA–Protein interactions for RNA: ENST00000495484.5

PCDH15-223, Transcript of protocadherin related 15, human

TSL 5 BASIC

Gene PCDH15, Length 1,896 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCDH15-223	ENST00000495484	TRMT112	Q9UI30	125 aa	Known RBP	11.51	□□□□□ -0.57
PCDH15-223	ENST00000495484	NIP7	Q9Y221	180 aa	Known RBP eCLIP	11.51	□□□□□ -0.57
PCDH15-223	ENST00000495484	USP42	Q9H9J4	1324 aa	Known RBP	11.5	□□□□□ -0.57
PCDH15-223	ENST00000495484	C4B	P0C0L5	1744 aa		11.5	□□□□□ -0.57
PCDH15-223	ENST00000495484	CASP7	P55210	303 aa		11.5	□□□□□ -0.57
PCDH15-223	ENST00000495484	EZH2	Q15910	746 aa	Known RBP	11.5	□□□□□ -0.57
PCDH15-223	ENST00000495484	USPL1	Q5W0Q7	1092 aa		11.5	□□□□□ -0.57
PCDH15-223	ENST00000495484	SMC5	Q8IY18	1101 aa		11.5	□□□□□ -0.57
PCDH15-223	ENST00000495484	SUCLG2	Q96I99	432 aa		11.5	□□□□□ -0.57
PCDH15-223	ENST00000495484	UTP14A	Q9BVJ6	771 aa	Known RBP	11.5	□□□□□ -0.57
PCDH15-223	ENST00000495484	N4BP2	Q86UW6	1770 aa	Predicted RBP	11.5	□□□□□ -0.57
PCDH15-223	ENST00000495484	MYH14	Q7Z406	1995 aa	Known RBP	11.49	□□□□□ -0.57
PCDH15-223	ENST00000495484	SRGAP3	O43295	1099 aa		11.49	□□□□□ -0.57
PCDH15-223	ENST00000495484	SSH3	Q8TE77	659 aa		11.49	□□□□□ -0.57
PCDH15-223	ENST00000495484	SETDB2	Q96T68	719 aa		11.49	□□□□□ -0.57
PCDH15-223	ENST00000495484	DCTPP1	Q9H773	170 aa		11.49	□□□□□ -0.57
PCDH15-223	ENST00000495484	CDHR2	Q9BYE9	1310 aa		11.49	□□□□□ -0.57
PCDH15-223	ENST00000495484	ARFGEF2	Q9Y6D5	1785 aa		11.49	□□□□□ -0.57
PCDH15-223	ENST00000495484	HSP90AB4P	Q58FF6	505 aa		11.49	□□□□□ -0.57
PCDH15-223	ENST00000495484	PLA2G12B	Q9BX93	195 aa		11.49	□□□□□ -0.57
PCDH15-223	ENST00000495484	NYX	Q9GZU5	481 aa		11.49	□□□□□ -0.57
PCDH15-223	ENST00000495484	BICC1	Q9H694	974 aa	Known RBP	11.49	□□□□□ -0.57
PCDH15-223	ENST00000495484	ZBTB47	Q9UFB7	747 aa	Predicted RBP	11.49	□□□□□ -0.57
PCDH15-223	ENST00000495484	POLA2	Q14181	598 aa		11.48	□□□□□ -0.57
PCDH15-223	ENST00000495484	RABL6	Q3YEC7	729 aa	Predicted RBP	11.48	□□□□□ -0.57
PCDH15-223	ENST00000495484	FAM89A	Q96GI7	184 aa		11.48	□□□□□ -0.57
PCDH15-223	ENST00000495484	KAZALD1	Q96I82	304 aa		11.48	□□□□□ -0.57
PCDH15-223	ENST00000495484	BCL2L12	Q9HB09	334 aa		11.48	□□□□□ -0.57
PCDH15-223	ENST00000495484	STK32B	Q9NY57	414 aa		11.48	□□□□□ -0.57
PCDH15-223	ENST00000495484	SRP68	Q9UHB9	627 aa	Known RBP	11.48	□□□□□ -0.57
PCDH15-223	ENST00000495484	UBN2	Q6ZU65	1347 aa		11.48	□□□□□ -0.57
PCDH15-223	ENST00000495484	SH3TC1	Q8TE82	1336 aa		11.48	□□□□□ -0.57
PCDH15-223	ENST00000495484	NUP188	Q5SRE5	1749 aa		11.47	□□□□□ -0.57
PCDH15-223	ENST00000495484	RGPD3	A6NKT7	1758 aa	Predicted RBP	11.47	□□□□□ -0.57
PCDH15-223	ENST00000495484	RGPD4	Q7Z3J3	1758 aa		11.47	□□□□□ -0.57
PCDH15-223	ENST00000495484	PNMA6E	A0A0J9YXQ4	647 aa		11.47	□□□□□ -0.57
PCDH15-223	ENST00000495484	ZNF827	Q17R98	1081 aa		11.47	□□□□□ -0.57
PCDH15-223	ENST00000495484	SUSD4	Q5VX71	490 aa		11.47	□□□□□ -0.57
PCDH15-223	ENST00000495484	AMIGO3	Q86WK7	504 aa		11.47	□□□□□ -0.57
PCDH15-223	ENST00000495484	IRS4	O14654	1257 aa	Predicted RBP	11.46	□□□□□ -0.57
PCDH15-223	ENST00000495484	SLC15A2	Q16348	729 aa		11.46	□□□□□ -0.57
PCDH15-223	ENST00000495484	RTL5	Q5HYW3	569 aa	Predicted RBP	11.46	□□□□□ -0.57
PCDH15-223	ENST00000495484	TBC1D9B	Q66K14	1250 aa		11.46	□□□□□ -0.57
PCDH15-223	ENST00000495484	TPTE2	Q6XPS3	522 aa		11.46	□□□□□ -0.57
PCDH15-223	ENST00000495484	SMIM5	Q71RC9	77 aa		11.46	□□□□□ -0.57
PCDH15-223	ENST00000495484	NLGN1	Q8N2Q7	840 aa		11.46	□□□□□ -0.57
PCDH15-223	ENST00000495484	JARID2	Q92833	1246 aa	Predicted RBP	11.46	□□□□□ -0.57
PCDH15-223	ENST00000495484	TNS1	Q9HBL0	1735 aa	Known RBP	11.46	□□□□□ -0.57
PCDH15-223	ENST00000495484	TAF1L	Q8IZX4	1826 aa		11.46	□□□□□ -0.57
PCDH15-223	ENST00000495484	PDE8A	O60658	829 aa		11.46	□□□□□ -0.58
PCDH15-223	ENST00000495484	RAB11FIP3	O75154	756 aa		11.46	□□□□□ -0.58
PCDH15-223	ENST00000495484	GYS1	P13807	737 aa		11.46	□□□□□ -0.58
PCDH15-223	ENST00000495484	GTF2E1	P29083	439 aa	Predicted RBP	11.46	□□□□□ -0.58
PCDH15-223	ENST00000495484	FOXO4	P98177	505 aa		11.46	□□□□□ -0.58
PCDH15-223	ENST00000495484	LMBR1L	Q6UX01	489 aa		11.46	□□□□□ -0.58
PCDH15-223	ENST00000495484	NTSR2	O95665	410 aa		11.45	□□□□□ -0.58
PCDH15-223	ENST00000495484	NUCB1	Q02818	461 aa		11.45	□□□□□ -0.58
PCDH15-223	ENST00000495484	EPHA10	Q5JZY3	1008 aa		11.45	□□□□□ -0.58
PCDH15-223	ENST00000495484	BICDL1	Q6ZP65	573 aa		11.45	□□□□□ -0.58
PCDH15-223	ENST00000495484	DEFB132	Q7Z7B7	95 aa		11.45	□□□□□ -0.58
PCDH15-223	ENST00000495484	NBPF5P	Q86XG9	351 aa	Predicted RBP	11.45	□□□□□ -0.58
PCDH15-223	ENST00000495484	NOP58	Q9Y2X3	529 aa	Known RBP	11.45	□□□□□ -0.58
PCDH15-223	ENST00000495484	SURF6	O75683	361 aa	Known RBP	11.44	□□□□□ -0.58
PCDH15-223	ENST00000495484	CSF1R	P07333	972 aa		11.44	□□□□□ -0.58
PCDH15-223	ENST00000495484	ANKRD45	Q5TZF3	282 aa		11.44	□□□□□ -0.58
PCDH15-223	ENST00000495484	COL23A1	Q86Y22	540 aa	Predicted RBP	11.44	□□□□□ -0.58
PCDH15-223	ENST00000495484	ERC1	Q8IUD2	1116 aa		11.44	□□□□□ -0.58
PCDH15-223	ENST00000495484	CARMIL3	Q8ND23	1372 aa		11.44	□□□□□ -0.58
PCDH15-223	ENST00000495484	PDZRN3	Q9UPQ7	1066 aa		11.44	□□□□□ -0.58
PCDH15-223	ENST00000495484	FAM177B	A6PVY3	158 aa		11.44	□□□□□ -0.58
PCDH15-223	ENST00000495484	CTSW	P56202	376 aa		11.44	□□□□□ -0.58
PCDH15-223	ENST00000495484	CCDC57	Q2TAC2	916 aa		11.44	□□□□□ -0.58
PCDH15-223	ENST00000495484	SLC10A5	Q5PT55	438 aa		11.44	□□□□□ -0.58
PCDH15-223	ENST00000495484	CHD1L	Q86WJ1	897 aa		11.44	□□□□□ -0.58
PCDH15-223	ENST00000495484	PNPLA7	Q6ZV29	1317 aa		11.43	□□□□□ -0.58
PCDH15-223	ENST00000495484	NPHP1	O15259	732 aa		11.43	□□□□□ -0.58
PCDH15-223	ENST00000495484	G3BP1	Q13283	466 aa	Known RBP eCLIP	11.43	□□□□□ -0.58
PCDH15-223	ENST00000495484	NFIX	Q14938	502 aa		11.43	□□□□□ -0.58
PCDH15-223	ENST00000495484	LRRCC1	Q9C099	1032 aa		11.43	□□□□□ -0.58
PCDH15-223	ENST00000495484	COPRS	Q9NQ92	184 aa		11.43	□□□□□ -0.58
PCDH15-223	ENST00000495484	FBXO3	Q9UK99	471 aa		11.43	□□□□□ -0.58
PCDH15-223	ENST00000495484	CHMP3	Q9Y3E7	222 aa		11.43	□□□□□ -0.58
PCDH15-223	ENST00000495484	TM4SF1	P30408	202 aa		11.42	□□□□□ -0.58
PCDH15-223	ENST00000495484	IFIT5	Q13325	482 aa	Known RBP	11.42	□□□□□ -0.58
PCDH15-223	ENST00000495484	OS9	Q13438	667 aa	Predicted RBP	11.42	□□□□□ -0.58
PCDH15-223	ENST00000495484	CCDC152	Q4G0S7	254 aa		11.42	□□□□□ -0.58
PCDH15-223	ENST00000495484	SYNE4	Q8N205	404 aa		11.42	□□□□□ -0.58
PCDH15-223	ENST00000495484	TTLL11	Q8NHH1	800 aa		11.42	□□□□□ -0.58
PCDH15-223	ENST00000495484	KIF1BP	Q96EK5	621 aa		11.42	□□□□□ -0.58
PCDH15-223	ENST00000495484	EXOC6B	Q9Y2D4	811 aa		11.42	□□□□□ -0.58
PCDH15-223	ENST00000495484	UPF1	Q92900	1129 aa	Known RBP eCLIP	11.42	□□□□□ -0.58
PCDH15-223	ENST00000495484	ANO8	Q9HCE9	1232 aa	Predicted RBP	11.42	□□□□□ -0.58
PCDH15-223	ENST00000495484	NUP98	P52948	1817 aa		11.42	□□□□□ -0.58
PCDH15-223	ENST00000495484	SCN7A	Q01118	1682 aa		11.41	□□□□□ -0.58
PCDH15-223	ENST00000495484	ANKRD18B	A2A2Z9	1011 aa		11.41	□□□□□ -0.58
PCDH15-223	ENST00000495484	HCLS1	P14317	486 aa	Predicted RBP	11.41	□□□□□ -0.58
PCDH15-223	ENST00000495484	RFX5	P48382	616 aa	Predicted RBP	11.41	□□□□□ -0.58
PCDH15-223	ENST00000495484	PTPN12	Q05209	780 aa	Known RBP	11.41	□□□□□ -0.58
PCDH15-223	ENST00000495484	ERFE	Q4G0M1	354 aa		11.41	□□□□□ -0.58
PCDH15-223	ENST00000495484	NUTM1	Q86Y26	1132 aa		11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms