RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 BCL2L13Q9BXK5 485 aa15.39■□□□□ 0.05
CSNK1E-213ENST00000495232 RNF123Q5XPI4 1314 aa15.39■□□□□ 0.05
CSNK1E-213ENST00000495232 N4BP2Q86UW6 1770 aaPredicted RBP15.39■□□□□ 0.05
CSNK1E-213ENST00000495232 NTSR2O95665 410 aa15.38■□□□□ 0.05
CSNK1E-213ENST00000495232 TRIM28Q13263 835 aaKnown RBP15.38■□□□□ 0.05
CSNK1E-213ENST00000495232 ERFEQ4G0M1 354 aa15.38■□□□□ 0.05
CSNK1E-213ENST00000495232 CCDC191Q8NCU4 936 aa15.38■□□□□ 0.05
CSNK1E-213ENST00000495232 DNAAF4Q8WXU2 420 aa15.38■□□□□ 0.05
CSNK1E-213ENST00000495232 CWC25Q9NXE8 425 aaPredicted RBP15.38■□□□□ 0.05
CSNK1E-213ENST00000495232 PIM2Q9P1W9 311 aa15.38■□□□□ 0.05
CSNK1E-213ENST00000495232 PXDNLA1KZ92 1463 aa15.38■□□□□ 0.05
CSNK1E-213ENST00000495232 ADCY9O60503 1353 aa15.37■□□□□ 0.05
CSNK1E-213ENST00000495232 CHRNA5P30532 468 aa15.37■□□□□ 0.05
CSNK1E-213ENST00000495232 PTPRCP08575 1304 aa15.37■□□□□ 0.05
CSNK1E-213ENST00000495232 SH3TC1Q8TE82 1336 aa15.37■□□□□ 0.05
CSNK1E-213ENST00000495232 HSP90B1P14625 803 aaKnown RBP15.36■□□□□ 0.05
CSNK1E-213ENST00000495232 RARSP54136 660 aaKnown RBP15.36■□□□□ 0.05
CSNK1E-213ENST00000495232 ZNF622Q969S3 477 aaKnown RBP eCLIP15.36■□□□□ 0.056e-8■■□□□ 11.7
CSNK1E-213ENST00000495232 NLRP3Q96P20 1036 aa15.36■□□□□ 0.05
CSNK1E-213ENST00000495232 WWC3Q9ULE0 1092 aa15.36■□□□□ 0.05
CSNK1E-213ENST00000495232 F6X3S4 739 aa15.35■□□□□ 0.05
CSNK1E-213ENST00000495232 DALRD3Q5D0E6 543 aaKnown RBP15.35■□□□□ 0.05
CSNK1E-213ENST00000495232 SLC4A10Q6U841 1118 aa15.35■□□□□ 0.05
CSNK1E-213ENST00000495232 FAM89AQ96GI7 184 aa15.35■□□□□ 0.05
CSNK1E-213ENST00000495232 BCS1LQ9Y276 419 aa15.35■□□□□ 0.05
CSNK1E-213ENST00000495232 ANKRD31Q8N7Z5 1873 aa15.35■□□□□ 0.05
CSNK1E-213ENST00000495232 GRIN3BO60391 1043 aa15.34■□□□□ 0.05
CSNK1E-213ENST00000495232 KCNA3P22001 575 aa15.34■□□□□ 0.05
CSNK1E-213ENST00000495232 RTL5Q5HYW3 569 aaPredicted RBP15.34■□□□□ 0.05
CSNK1E-213ENST00000495232 ZBTB38Q8NAP3 1195 aaPredicted RBP15.34■□□□□ 0.05
CSNK1E-213ENST00000495232 LINS1Q8NG48 757 aa15.34■□□□□ 0.05
CSNK1E-213ENST00000495232 RPGRQ92834 1020 aaKnown RBP15.34■□□□□ 0.05
CSNK1E-213ENST00000495232 MASTLQ96GX5 879 aa15.34■□□□□ 0.05
CSNK1E-213ENST00000495232 KIF16BQ96L93 1317 aa15.34■□□□□ 0.05
CSNK1E-213ENST00000495232 ABCC12Q96J65 1359 aa15.34■□□□□ 0.05
CSNK1E-213ENST00000495232 KIAA1551Q9HCM1 1747 aa15.34■□□□□ 0.05
CSNK1E-213ENST00000495232 NEURL1BA8MQ27 555 aa15.33■□□□□ 0.04
CSNK1E-213ENST00000495232 IGKV5-2P06315 115 aa15.33■□□□□ 0.04
CSNK1E-213ENST00000495232 SRGNP10124 158 aa15.33■□□□□ 0.04
CSNK1E-213ENST00000495232 NPR1P16066 1061 aa15.33■□□□□ 0.04
CSNK1E-213ENST00000495232 CWF19L2Q2TBE0 894 aaKnown RBP15.33■□□□□ 0.04
CSNK1E-213ENST00000495232 SLC10A5Q5PT55 438 aa15.33■□□□□ 0.04
CSNK1E-213ENST00000495232 TTLL6Q8N841 843 aa15.33■□□□□ 0.04
CSNK1E-213ENST00000495232 NOB1Q9ULX3 412 aaKnown RBP15.33■□□□□ 0.04
CSNK1E-213ENST00000495232 IRS4O14654 1257 aaPredicted RBP15.32■□□□□ 0.04
CSNK1E-213ENST00000495232 IPO8O15397 1037 aaKnown RBP15.32■□□□□ 0.04
CSNK1E-213ENST00000495232 PCCAP05165 728 aaPredicted RBP15.32■□□□□ 0.04
CSNK1E-213ENST00000495232 HCLS1P14317 486 aaPredicted RBP15.32■□□□□ 0.04
CSNK1E-213ENST00000495232 BRPF1P55201 1214 aaPredicted RBP15.32■□□□□ 0.04
CSNK1E-213ENST00000495232 STYK1Q6J9G0 422 aa15.32■□□□□ 0.04
CSNK1E-213ENST00000495232 CNKSR1Q969H4 720 aa15.32■□□□□ 0.04
CSNK1E-213ENST00000495232 UTRNP46939 3433 aa15.32■□□□□ 0.04
CSNK1E-213ENST00000495232 RIC1Q4ADV7 1423 aa15.32■□□□□ 0.04
CSNK1E-213ENST00000495232 DLEC1Q9Y238 1755 aa15.31■□□□□ 0.04
CSNK1E-213ENST00000495232 KLRG2A4D1S0 409 aaPredicted RBP15.31■□□□□ 0.04
CSNK1E-213ENST00000495232 ALDH1B1P30837 517 aa15.31■□□□□ 0.04
CSNK1E-213ENST00000495232 SYNE4Q8N205 404 aa15.31■□□□□ 0.04
CSNK1E-213ENST00000495232 FRAT1Q92837 279 aaPredicted RBP15.31■□□□□ 0.04
CSNK1E-213ENST00000495232 RBM17Q96I25 401 aaKnown RBP15.31■□□□□ 0.04
CSNK1E-213ENST00000495232 API5Q9BZZ5 524 aaKnown RBP15.31■□□□□ 0.04
CSNK1E-213ENST00000495232 SRCIN1Q9C0H9 1055 aa15.31■□□□□ 0.04
CSNK1E-213ENST00000495232 BCAR3O75815 825 aa15.3■□□□□ 0.04
CSNK1E-213ENST00000495232 COL11A2P13942 1736 aaPredicted RBP15.3■□□□□ 0.04
CSNK1E-213ENST00000495232 YBX3P16989 372 aaKnown RBP eCLIP15.3■□□□□ 0.04
CSNK1E-213ENST00000495232 BRCA1P38398 1863 aaKnown RBP15.3■□□□□ 0.04
CSNK1E-213ENST00000495232 GCKRQ14397 625 aa15.3■□□□□ 0.04
CSNK1E-213ENST00000495232 BEND3Q5T5X7 828 aa15.3■□□□□ 0.04
CSNK1E-213ENST00000495232 TNRC6CQ9HCJ0 1690 aaKnown RBP15.29■□□□□ 0.04
CSNK1E-213ENST00000495232 ALDH1L1O75891 902 aa15.29■□□□□ 0.04
CSNK1E-213ENST00000495232 CRY2Q49AN0 593 aa15.29■□□□□ 0.04
CSNK1E-213ENST00000495232 ARHGAP45Q92619 1136 aa15.29■□□□□ 0.04
CSNK1E-213ENST00000495232 JARID2Q92833 1246 aaPredicted RBP15.29■□□□□ 0.04
CSNK1E-213ENST00000495232 C9orf78Q9NZ63 289 aaPredicted RBP15.29■□□□□ 0.04
CSNK1E-213ENST00000495232 CDHR2Q9BYE9 1310 aa15.28■□□□□ 0.04
CSNK1E-213ENST00000495232 PDE8AO60658 829 aa15.28■□□□□ 0.04
CSNK1E-213ENST00000495232 DDX46Q7L014 1031 aaKnown RBP15.28■□□□□ 0.04
CSNK1E-213ENST00000495232 UBE3BQ7Z3V4 1068 aa15.28■□□□□ 0.04
CSNK1E-213ENST00000495232 TMX4Q9H1E5 349 aaPredicted RBP15.28■□□□□ 0.04
CSNK1E-213ENST00000495232 CACNA1SQ13698 1873 aa15.27■□□□□ 0.04
CSNK1E-213ENST00000495232 DDX60Q8IY21 1712 aaKnown RBP15.27■□□□□ 0.04
CSNK1E-213ENST00000495232 H7C1W4 665 aa15.27■□□□□ 0.04
CSNK1E-213ENST00000495232 CCT4P50991 539 aaKnown RBP15.27■□□□□ 0.04
CSNK1E-213ENST00000495232 PRPF40BQ6NWY9 871 aaKnown RBP15.27■□□□□ 0.04
CSNK1E-213ENST00000495232 ARHGAP27Q6ZUM4 889 aa15.27■□□□□ 0.04
CSNK1E-213ENST00000495232 C3orf67Q6ZVT6 689 aa15.27■□□□□ 0.04
CSNK1E-213ENST00000495232 ZNF219Q9P2Y4 722 aaPredicted RBP15.27■□□□□ 0.04
CSNK1E-213ENST00000495232 ARFGEF1Q9Y6D6 1849 aa15.27■□□□□ 0.03
CSNK1E-213ENST00000495232 LAMB2P55268 1798 aa15.26■□□□□ 0.03
CSNK1E-213ENST00000495232 GRM8O00222 908 aa15.26■□□□□ 0.03
CSNK1E-213ENST00000495232 HOXA10P31260 410 aaPredicted RBP15.26■□□□□ 0.03
CSNK1E-213ENST00000495232 CCDC152Q4G0S7 254 aa15.26■□□□□ 0.03
CSNK1E-213ENST00000495232 SOGA3Q5TF21 947 aa15.26■□□□□ 0.03
CSNK1E-213ENST00000495232 ZKSCAN2Q63HK3 967 aa15.26■□□□□ 0.03
CSNK1E-213ENST00000495232 CRAMP1Q96RY5 1269 aa15.26■□□□□ 0.03
CSNK1E-213ENST00000495232 C21orf2O43822 256 aa15.25■□□□□ 0.03
CSNK1E-213ENST00000495232 SF3B3Q15393 1217 aaKnown RBP15.25■□□□□ 0.03
CSNK1E-213ENST00000495232 ATF7IPQ6VMQ6 1270 aa15.25■□□□□ 0.03
CSNK1E-213ENST00000495232 RCAN3Q9UKA8 241 aa15.25■□□□□ 0.03
CSNK1E-213ENST00000495232 CTSWP56202 376 aa15.24■□□□□ 0.03
CSNK1E-213ENST00000495232 FTSJ3Q8IY81 847 aaKnown RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms