RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 GPRC5DQ9NZD1 345 aa12.54□□□□□ -0.4
GARNL3-219ENST00000495172 PDZRN3Q9UPQ7 1066 aa12.54□□□□□ -0.4
GARNL3-219ENST00000495172 POLR2AP24928 1970 aaKnown RBP12.54□□□□□ -0.4
GARNL3-219ENST00000495172 SNED1Q8TER0 1413 aa12.54□□□□□ -0.4
GARNL3-219ENST00000495172 FBXO46Q6PJ61 603 aaPredicted RBP12.53□□□□□ -0.4
GARNL3-219ENST00000495172 MNX1P50219 401 aaPredicted RBP12.52□□□□□ -0.41
GARNL3-219ENST00000495172 PKN2Q16513 984 aaKnown RBP12.52□□□□□ -0.41
GARNL3-219ENST00000495172 RTKN2Q8IZC4 609 aa12.52□□□□□ -0.41
GARNL3-219ENST00000495172 R3HDMLQ9H3Y0 253 aa12.52□□□□□ -0.41
GARNL3-219ENST00000495172 RBM27Q9P2N5 1060 aaKnown RBP12.52□□□□□ -0.41
GARNL3-219ENST00000495172 GMPSP49915 693 aaPredicted RBP12.51□□□□□ -0.41
GARNL3-219ENST00000495172 ST5P78524 1137 aa12.51□□□□□ -0.41
GARNL3-219ENST00000495172 EIF4A2Q14240 407 aaKnown RBP12.51□□□□□ -0.41
GARNL3-219ENST00000495172 LARGE2Q8N3Y3 721 aa12.51□□□□□ -0.41
GARNL3-219ENST00000495172 FAM177BA6PVY3 158 aa12.5□□□□□ -0.41
GARNL3-219ENST00000495172 ADM5C9JUS6 153 aa12.5□□□□□ -0.41
GARNL3-219ENST00000495172 TCERG1O14776 1098 aaKnown RBP12.5□□□□□ -0.41
GARNL3-219ENST00000495172 HSP90AB1P08238 724 aaKnown RBP12.5□□□□□ -0.41
GARNL3-219ENST00000495172 SLC10A3P09131 477 aa12.5□□□□□ -0.41
GARNL3-219ENST00000495172 NPR1P16066 1061 aa12.5□□□□□ -0.41
GARNL3-219ENST00000495172 EIF5P55010 431 aaKnown RBP12.5□□□□□ -0.41
GARNL3-219ENST00000495172 GBA2Q9HCG7 927 aaPredicted RBP12.5□□□□□ -0.41
GARNL3-219ENST00000495172 PGAP2Q9UHJ9 254 aa12.5□□□□□ -0.41
GARNL3-219ENST00000495172 KIF24Q5T7B8 1368 aa12.49□□□□□ -0.41
GARNL3-219ENST00000495172 SOX1O00570 391 aaPredicted RBP12.49□□□□□ -0.41
GARNL3-219ENST00000495172 CDC37L1Q7L3B6 337 aa12.49□□□□□ -0.41
GARNL3-219ENST00000495172 AEBP1Q8IUX7 1158 aa12.49□□□□□ -0.41
GARNL3-219ENST00000495172 MPNDQ8N594 471 aa12.49□□□□□ -0.41
GARNL3-219ENST00000495172 SETDB2Q96T68 719 aa12.49□□□□□ -0.41
GARNL3-219ENST00000495172 WASHC2AQ641Q2 1341 aa12.48□□□□□ -0.41
GARNL3-219ENST00000495172 CCDC102AQ96A19 550 aa12.48□□□□□ -0.41
GARNL3-219ENST00000495172 LGR6Q9HBX8 967 aa12.48□□□□□ -0.41
GARNL3-219ENST00000495172 RAPGEFL1Q9UHV5 662 aa12.48□□□□□ -0.41
GARNL3-219ENST00000495172 U3KPZ7 1027 aaPredicted RBP12.48□□□□□ -0.41
GARNL3-219ENST00000495172 RBBP6Q7Z6E9 1792 aaKnown RBP12.48□□□□□ -0.41
GARNL3-219ENST00000495172 GPR25O00155 361 aa12.47□□□□□ -0.41
GARNL3-219ENST00000495172 CXCL9Q07325 125 aa12.47□□□□□ -0.41
GARNL3-219ENST00000495172 AOC3Q16853 763 aa12.47□□□□□ -0.41
GARNL3-219ENST00000495172 PLEKHO1Q53GL0 409 aaPredicted RBP12.47□□□□□ -0.41
GARNL3-219ENST00000495172 RASAL3Q86YV0 1011 aa12.47□□□□□ -0.41
GARNL3-219ENST00000495172 LRCH3Q96II8 777 aa12.47□□□□□ -0.41
GARNL3-219ENST00000495172 PSMD1Q99460 953 aa12.47□□□□□ -0.41
GARNL3-219ENST00000495172 EYSQ5T1H1 3165 aa12.47□□□□□ -0.41
GARNL3-219ENST00000495172 NPC1L1Q9UHC9 1359 aa12.46□□□□□ -0.41
GARNL3-219ENST00000495172 CAMTA2O94983 1202 aa12.46□□□□□ -0.41
GARNL3-219ENST00000495172 EGFRP00533 1210 aa12.46□□□□□ -0.41
GARNL3-219ENST00000495172 PIP4K2AP48426 406 aaPredicted RBP12.46□□□□□ -0.41
GARNL3-219ENST00000495172 C1QBPQ07021 282 aaKnown RBP12.46□□□□□ -0.41
GARNL3-219ENST00000495172 MKRN3Q13064 507 aaKnown RBP12.45□□□□□ -0.42
GARNL3-219ENST00000495172 C1orf141Q5JVX7 400 aa12.45□□□□□ -0.42
GARNL3-219ENST00000495172 NBPF5PQ86XG9 351 aaPredicted RBP12.45□□□□□ -0.42
GARNL3-219ENST00000495172 NIM1KQ8IY84 436 aa12.45□□□□□ -0.42
GARNL3-219ENST00000495172 C2orf69Q8N8R5 385 aa12.45□□□□□ -0.42
GARNL3-219ENST00000495172 CARD11Q9BXL7 1154 aa12.45□□□□□ -0.42
GARNL3-219ENST00000495172 FOXD4L1Q9NU39 408 aa12.45□□□□□ -0.42
GARNL3-219ENST00000495172 RAD17O75943 681 aa12.44□□□□□ -0.42
GARNL3-219ENST00000495172 MOB2Q70IA6 237 aa12.44□□□□□ -0.42
GARNL3-219ENST00000495172 SAMD7Q7Z3H4 446 aa12.44□□□□□ -0.42
GARNL3-219ENST00000495172 KRT26Q7Z3Y9 468 aa12.44□□□□□ -0.42
GARNL3-219ENST00000495172 SIN3AQ96ST3 1273 aa12.44□□□□□ -0.42
GARNL3-219ENST00000495172 POLKQ9UBT6 870 aa12.44□□□□□ -0.42
GARNL3-219ENST00000495172 ASTN2O75129 1339 aaPredicted RBP12.43□□□□□ -0.42
GARNL3-219ENST00000495172 PPIP5K2O43314 1243 aa12.43□□□□□ -0.42
GARNL3-219ENST00000495172 TNNT2P45379 298 aaPredicted RBP12.43□□□□□ -0.42
GARNL3-219ENST00000495172 SLC52A2Q9HAB3 445 aa12.43□□□□□ -0.42
GARNL3-219ENST00000495172 A0A087WZG4 1122 aa12.42□□□□□ -0.42
GARNL3-219ENST00000495172 KLRG2A4D1S0 409 aaPredicted RBP12.42□□□□□ -0.42
GARNL3-219ENST00000495172 MYCP01106 439 aaPredicted RBP12.42□□□□□ -0.42
GARNL3-219ENST00000495172 A1BGP04217 495 aa12.42□□□□□ -0.42
GARNL3-219ENST00000495172 TBC1D10BQ4KMP7 808 aaPredicted RBP12.42□□□□□ -0.42
GARNL3-219ENST00000495172 TESK2Q96S53 571 aa12.42□□□□□ -0.42
GARNL3-219ENST00000495172 CARD14Q9BXL6 1004 aa12.42□□□□□ -0.42
GARNL3-219ENST00000495172 TRIM17Q9Y577 477 aa12.42□□□□□ -0.42
GARNL3-219ENST00000495172 RBM26Q5T8P6 1007 aaKnown RBP12.41□□□□□ -0.42
GARNL3-219ENST00000495172 ZC3H15Q8WU90 426 aaKnown RBP12.41□□□□□ -0.42
GARNL3-219ENST00000495172 BCL2L13Q9BXK5 485 aa12.41□□□□□ -0.42
GARNL3-219ENST00000495172 CNOT7Q9UIV1 285 aaKnown RBP12.41□□□□□ -0.42
GARNL3-219ENST00000495172 ZBTB12Q9Y330 459 aaPredicted RBP12.41□□□□□ -0.42
GARNL3-219ENST00000495172 UBR2Q8IWV8 1755 aa12.41□□□□□ -0.42
GARNL3-219ENST00000495172 FKTNO75072 461 aa12.4□□□□□ -0.42
GARNL3-219ENST00000495172 CAP1Q01518 475 aa12.4□□□□□ -0.42
GARNL3-219ENST00000495172 Q7L0L9 218 aa12.4□□□□□ -0.42
GARNL3-219ENST00000495172 OTOP1Q7RTM1 612 aa12.4□□□□□ -0.42
GARNL3-219ENST00000495172 MICALL2Q8IY33 904 aa12.4□□□□□ -0.42
GARNL3-219ENST00000495172 SCAF8Q9UPN6 1271 aaKnown RBP12.4□□□□□ -0.42
GARNL3-219ENST00000495172 PRUNE2Q8WUY3 3088 aa12.39□□□□□ -0.43
GARNL3-219ENST00000495172 LAMB4A4D0S4 1761 aa12.39□□□□□ -0.43
GARNL3-219ENST00000495172 ZBTB22O15209 634 aa12.39□□□□□ -0.43
GARNL3-219ENST00000495172 PUS7Q96PZ0 661 aaKnown RBP12.39□□□□□ -0.43
GARNL3-219ENST00000495172 ABCC12Q96J65 1359 aa12.39□□□□□ -0.43
GARNL3-219ENST00000495172 ALDH1B1P30837 517 aa12.38□□□□□ -0.43
GARNL3-219ENST00000495172 NEUROD1Q13562 356 aa12.38□□□□□ -0.43
GARNL3-219ENST00000495172 AMOTQ4VCS5 1084 aa12.38□□□□□ -0.43
GARNL3-219ENST00000495172 DZIP3Q86Y13 1208 aaKnown RBP12.38□□□□□ -0.43
GARNL3-219ENST00000495172 ZNRF3Q9ULT6 936 aa12.38□□□□□ -0.43
GARNL3-219ENST00000495172 WTIPA6NIX2 430 aaPredicted RBP12.37□□□□□ -0.43
GARNL3-219ENST00000495172 RNMTO43148 476 aaKnown RBP12.37□□□□□ -0.43
GARNL3-219ENST00000495172 STARD3NLO95772 234 aa12.37□□□□□ -0.43
GARNL3-219ENST00000495172 INTS3Q68E01 1043 aaKnown RBP12.37□□□□□ -0.43
GARNL3-219ENST00000495172 NUTM1Q86Y26 1132 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 526.7 ms