RNA–Protein interactions for RNA: ENST00000494945.1

PKP4-215, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-215ENST00000494945 ZNF34Q8IZ26 560 aa13.75□□□□□ -0.21
PKP4-215ENST00000494945 AK7Q96M32 723 aa13.75□□□□□ -0.21
PKP4-215ENST00000494945 NLRP10Q86W26 655 aa13.74□□□□□ -0.21
PKP4-215ENST00000494945 SSH3Q8TE77 659 aa13.74□□□□□ -0.21
PKP4-215ENST00000494945 KAZALD1Q96I82 304 aa13.74□□□□□ -0.21
PKP4-215ENST00000494945 SUCLG2Q96I99 432 aa13.74□□□□□ -0.21
PKP4-215ENST00000494945 NARFQ9UHQ1 456 aa13.74□□□□□ -0.21
PKP4-215ENST00000494945 PNMA6EA0A0J9YXQ4 647 aa13.73□□□□□ -0.21
PKP4-215ENST00000494945 PCCAP05165 728 aaPredicted RBP13.73□□□□□ -0.21
PKP4-215ENST00000494945 POLA2Q14181 598 aa13.73□□□□□ -0.21
PKP4-215ENST00000494945 PPP1R42Q7Z4L9 355 aa13.73□□□□□ -0.21
PKP4-215ENST00000494945 PROM2Q8N271 834 aa13.73□□□□□ -0.21
PKP4-215ENST00000494945 PDZRN3Q9UPQ7 1066 aa13.73□□□□□ -0.21
PKP4-215ENST00000494945 CDHR2Q9BYE9 1310 aa13.72□□□□□ -0.21
PKP4-215ENST00000494945 SRGAP3O43295 1099 aa13.72□□□□□ -0.21
PKP4-215ENST00000494945 GPTP24298 496 aa13.72□□□□□ -0.21
PKP4-215ENST00000494945 NUCB1Q02818 461 aa13.72□□□□□ -0.21
PKP4-215ENST00000494945 RABL6Q3YEC7 729 aaPredicted RBP13.72□□□□□ -0.21
PKP4-215ENST00000494945 PARP10Q53GL7 1025 aa13.72□□□□□ -0.21
PKP4-215ENST00000494945 ZBTB38Q8NAP3 1195 aaPredicted RBP13.72□□□□□ -0.21
PKP4-215ENST00000494945 BICC1Q9H694 974 aaKnown RBP13.72□□□□□ -0.21
PKP4-215ENST00000494945 A0A1B0GUL6 1792 aa13.72□□□□□ -0.21
PKP4-215ENST00000494945 ZPR1O75312 459 aa13.71□□□□□ -0.21
PKP4-215ENST00000494945 SSFA2P28290 1259 aa13.71□□□□□ -0.21
PKP4-215ENST00000494945 TRAPPC3LQ5T215 181 aa13.71□□□□□ -0.21
PKP4-215ENST00000494945 UBN2Q6ZU65 1347 aa13.7□□□□□ -0.22
PKP4-215ENST00000494945 USP42Q9H9J4 1324 aaKnown RBP13.7□□□□□ -0.22
PKP4-215ENST00000494945 RFC4P35249 363 aa13.7□□□□□ -0.22
PKP4-215ENST00000494945 ARHGEF1Q92888 912 aaKnown RBP13.7□□□□□ -0.22
PKP4-215ENST00000494945 PLA2G12BQ9BX93 195 aa13.7□□□□□ -0.22
PKP4-215ENST00000494945 TAF1P21675 1872 aa13.7□□□□□ -0.22
PKP4-215ENST00000494945 FOXO4P98177 505 aa13.69□□□□□ -0.22
PKP4-215ENST00000494945 HSP90AB4PQ58FF6 505 aa13.69□□□□□ -0.22
PKP4-215ENST00000494945 EPHA10Q5JZY3 1008 aa13.69□□□□□ -0.22
PKP4-215ENST00000494945 ANKRD45Q5TZF3 282 aa13.69□□□□□ -0.22
PKP4-215ENST00000494945 USPL1Q5W0Q7 1092 aa13.69□□□□□ -0.22
PKP4-215ENST00000494945 CHD1LQ86WJ1 897 aa13.69□□□□□ -0.22
PKP4-215ENST00000494945 JARID2Q92833 1246 aaPredicted RBP13.69□□□□□ -0.22
PKP4-215ENST00000494945 ZBTB47Q9UFB7 747 aaPredicted RBP13.69□□□□□ -0.22
PKP4-215ENST00000494945 TRMT112Q9UI30 125 aaKnown RBP13.69□□□□□ -0.22
PKP4-215ENST00000494945 NIP7Q9Y221 180 aaKnown RBP eCLIP13.69□□□□□ -0.22
PKP4-215ENST00000494945 NRXN2Q9P2S2 1712 aa13.69□□□□□ -0.22
PKP4-215ENST00000494945 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.68□□□□□ -0.22
PKP4-215ENST00000494945 RAB11FIP3O75154 756 aa13.68□□□□□ -0.22
PKP4-215ENST00000494945 HSP90B1P14625 803 aaKnown RBP13.68□□□□□ -0.22
PKP4-215ENST00000494945 SF3B2Q13435 895 aaKnown RBP13.68□□□□□ -0.22
PKP4-215ENST00000494945 AMIGO3Q86WK7 504 aa13.68□□□□□ -0.22
PKP4-215ENST00000494945 FAM89AQ96GI7 184 aa13.68□□□□□ -0.22
PKP4-215ENST00000494945 UTP14AQ9BVJ6 771 aaKnown RBP13.68□□□□□ -0.22
PKP4-215ENST00000494945 BCL2L12Q9HB09 334 aa13.68□□□□□ -0.22
PKP4-215ENST00000494945 NOP58Q9Y2X3 529 aaKnown RBP13.68□□□□□ -0.22
PKP4-215ENST00000494945 SH3TC1Q8TE82 1336 aa13.67□□□□□ -0.22
PKP4-215ENST00000494945 SURF6O75683 361 aaKnown RBP13.67□□□□□ -0.22
PKP4-215ENST00000494945 PHF14O94880 888 aa13.67□□□□□ -0.22
PKP4-215ENST00000494945 SUSD4Q5VX71 490 aa13.67□□□□□ -0.22
PKP4-215ENST00000494945 AKT1S1Q96B36 256 aa13.67□□□□□ -0.22
PKP4-215ENST00000494945 LNPKQ9C0E8 428 aa13.67□□□□□ -0.22
PKP4-215ENST00000494945 SRP68Q9UHB9 627 aaKnown RBP13.67□□□□□ -0.22
PKP4-215ENST00000494945 EXOC6BQ9Y2D4 811 aa13.67□□□□□ -0.22
PKP4-215ENST00000494945 ANKRD31Q8N7Z5 1873 aa13.66□□□□□ -0.22
PKP4-215ENST00000494945 NTSR2O95665 410 aa13.66□□□□□ -0.22
PKP4-215ENST00000494945 BAG6P46379 1132 aa13.66□□□□□ -0.22
PKP4-215ENST00000494945 RGS3P49796 1198 aa13.66□□□□□ -0.22
PKP4-215ENST00000494945 RTL5Q5HYW3 569 aaPredicted RBP13.66□□□□□ -0.22
PKP4-215ENST00000494945 LMBR1LQ6UX01 489 aa13.66□□□□□ -0.22
PKP4-215ENST00000494945 SKAP1Q86WV1 359 aa13.66□□□□□ -0.22
PKP4-215ENST00000494945 ERC1Q8IUD2 1116 aa13.66□□□□□ -0.22
PKP4-215ENST00000494945 FLAD1Q8NFF5 587 aa13.66□□□□□ -0.22
PKP4-215ENST00000494945 CAMKK2Q96RR4 588 aa13.66□□□□□ -0.22
PKP4-215ENST00000494945 LRRCC1Q9C099 1032 aa13.66□□□□□ -0.22
PKP4-215ENST00000494945 NYXQ9GZU5 481 aa13.66□□□□□ -0.22
PKP4-215ENST00000494945 COPRSQ9NQ92 184 aa13.66□□□□□ -0.22
PKP4-215ENST00000494945 ARAP2Q8WZ64 1704 aa13.66□□□□□ -0.22
PKP4-215ENST00000494945 TNRC6CQ9HCJ0 1690 aaKnown RBP13.66□□□□□ -0.22
PKP4-215ENST00000494945 LRP5O75197 1615 aa13.65□□□□□ -0.22
PKP4-215ENST00000494945 IRS4O14654 1257 aaPredicted RBP13.65□□□□□ -0.22
PKP4-215ENST00000494945 PDE8AO60658 829 aa13.65□□□□□ -0.22
PKP4-215ENST00000494945 CSF1RP07333 972 aa13.65□□□□□ -0.22
PKP4-215ENST00000494945 RFX5P48382 616 aaPredicted RBP13.65□□□□□ -0.22
PKP4-215ENST00000494945 TBC1D9BQ66K14 1250 aa13.65□□□□□ -0.22
PKP4-215ENST00000494945 SMIM5Q71RC9 77 aa13.65□□□□□ -0.22
PKP4-215ENST00000494945 CCDC125Q86Z20 511 aa13.65□□□□□ -0.22
PKP4-215ENST00000494945 SETDB2Q96T68 719 aa13.65□□□□□ -0.22
PKP4-215ENST00000494945 CARMIL3Q8ND23 1372 aa13.64□□□□□ -0.23
PKP4-215ENST00000494945 PDE4AP27815 886 aa13.64□□□□□ -0.23
PKP4-215ENST00000494945 EN1Q05925 392 aaPredicted RBP13.64□□□□□ -0.23
PKP4-215ENST00000494945 ZNF827Q17R98 1081 aa13.64□□□□□ -0.23
PKP4-215ENST00000494945 KIF1BPQ96EK5 621 aa13.64□□□□□ -0.23
PKP4-215ENST00000494945 TFCP2L1Q9NZI6 479 aa13.64□□□□□ -0.23
PKP4-215ENST00000494945 CACNA1SQ13698 1873 aa13.63□□□□□ -0.23
PKP4-215ENST00000494945 RTL9Q8NET4 1388 aa13.63□□□□□ -0.23
PKP4-215ENST00000494945 APBB1O00213 710 aa13.63□□□□□ -0.23
PKP4-215ENST00000494945 CTSWP56202 376 aa13.63□□□□□ -0.23
PKP4-215ENST00000494945 G3BP1Q13283 466 aaKnown RBP eCLIP13.63□□□□□ -0.23
PKP4-215ENST00000494945 OS9Q13438 667 aaPredicted RBP13.63□□□□□ -0.23
PKP4-215ENST00000494945 EZH2Q15910 746 aaKnown RBP13.63□□□□□ -0.23
PKP4-215ENST00000494945 CHMP3Q9Y3E7 222 aa13.63□□□□□ -0.23
PKP4-215ENST00000494945 RIC1Q4ADV7 1423 aa13.63□□□□□ -0.23
PKP4-215ENST00000494945 MYH13Q9UKX3 1938 aa13.62□□□□□ -0.23
PKP4-215ENST00000494945 FAM177BA6PVY3 158 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms