RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 LMNB1P20700 586 aa22.71■■□□□ 1.23
HDAC4-211ENST00000494800 RIC3Q7Z5B4 369 aa22.71■■□□□ 1.23
HDAC4-211ENST00000494800 NLRP10Q86W26 655 aa22.71■■□□□ 1.23
HDAC4-211ENST00000494800 ZNF526Q8TF50 670 aaPredicted RBP22.71■■□□□ 1.23
HDAC4-211ENST00000494800 MYH16Q9H6N6 1097 aa22.71■■□□□ 1.23
HDAC4-211ENST00000494800 CRY2Q49AN0 593 aa22.7■■□□□ 1.22
HDAC4-211ENST00000494800 TSPYL6Q8N831 410 aa22.7■■□□□ 1.22
HDAC4-211ENST00000494800 NLRP3Q96P20 1036 aa22.7■■□□□ 1.22
HDAC4-211ENST00000494800 TRMT112Q9UI30 125 aaKnown RBP22.7■■□□□ 1.22
HDAC4-211ENST00000494800 FANCIQ9NVI1 1328 aa22.7■■□□□ 1.22
HDAC4-211ENST00000494800 CCER2I3L3R5 266 aa22.69■■□□□ 1.22
HDAC4-211ENST00000494800 RASSF7Q02833 373 aa22.69■■□□□ 1.22
HDAC4-211ENST00000494800 SH3TC1Q8TE82 1336 aa22.68■■□□□ 1.22
HDAC4-211ENST00000494800 RBM17Q96I25 401 aaKnown RBP22.68■■□□□ 1.22
HDAC4-211ENST00000494800 PHAXQ9H814 394 aaKnown RBP22.68■■□□□ 1.22
HDAC4-211ENST00000494800 ZC3H4Q9UPT8 1303 aaKnown RBP22.67■■□□□ 1.22
HDAC4-211ENST00000494800 CCDC93Q567U6 631 aa22.67■■□□□ 1.22
HDAC4-211ENST00000494800 SLC10A5Q5PT55 438 aa22.67■■□□□ 1.22
HDAC4-211ENST00000494800 TAOK3Q9H2K8 898 aa22.67■■□□□ 1.22
HDAC4-211ENST00000494800 ANKRD36CQ5JPF3 1778 aa22.67■■□□□ 1.22
HDAC4-211ENST00000494800 NFKBIEO00221 500 aa22.66■■□□□ 1.22
HDAC4-211ENST00000494800 LTBP3Q9NS15 1303 aa22.65■■□□□ 1.22
HDAC4-211ENST00000494800 HOXA10P31260 410 aaPredicted RBP22.65■■□□□ 1.22
HDAC4-211ENST00000494800 ISCA1Q9BUE6 129 aa22.65■■□□□ 1.22
HDAC4-211ENST00000494800 ARFGEF2Q9Y6D5 1785 aa22.65■■□□□ 1.22
HDAC4-211ENST00000494800 TNRC6CQ9HCJ0 1690 aaKnown RBP22.65■■□□□ 1.22
HDAC4-211ENST00000494800 KDM2BQ8NHM5 1336 aa22.64■■□□□ 1.22
HDAC4-211ENST00000494800 ATP5J2-PTCD1G3V325 749 aa22.64■■□□□ 1.21
HDAC4-211ENST00000494800 TRIM28Q13263 835 aaKnown RBP22.64■■□□□ 1.21
HDAC4-211ENST00000494800 RTKN2Q8IZC4 609 aa22.64■■□□□ 1.21
HDAC4-211ENST00000494800 TMX4Q9H1E5 349 aaPredicted RBP22.64■■□□□ 1.21
HDAC4-211ENST00000494800 HSP90B1P14625 803 aaKnown RBP22.63■■□□□ 1.21
HDAC4-211ENST00000494800 CRAMP1Q96RY5 1269 aa22.63■■□□□ 1.21
HDAC4-211ENST00000494800 SLX4Q8IY92 1834 aa22.62■■□□□ 1.21
HDAC4-211ENST00000494800 SLC4A2P04920 1241 aa22.62■■□□□ 1.21
HDAC4-211ENST00000494800 EXOSC9Q06265 439 aaKnown RBP22.62■■□□□ 1.21
HDAC4-211ENST00000494800 GRIPAP1Q4V328 841 aa22.62■■□□□ 1.21
HDAC4-211ENST00000494800 CC2D2BQ6DHV5 1058 aa22.62■■□□□ 1.21
HDAC4-211ENST00000494800 C7orf43Q8WVR3 580 aa22.62■■□□□ 1.21
HDAC4-211ENST00000494800 MYD88Q99836 296 aa22.62■■□□□ 1.21
HDAC4-211ENST00000494800 TCERG1O14776 1098 aaKnown RBP22.61■■□□□ 1.21
HDAC4-211ENST00000494800 HCLS1P14317 486 aaPredicted RBP22.61■■□□□ 1.21
HDAC4-211ENST00000494800 NEXNQ0ZGT2 675 aa22.61■■□□□ 1.21
HDAC4-211ENST00000494800 PPEF1O14829 653 aaPredicted RBP22.6■■□□□ 1.21
HDAC4-211ENST00000494800 C1QTNF8P60827 252 aa22.6■■□□□ 1.21
HDAC4-211ENST00000494800 KSR2Q6VAB6 950 aa22.6■■□□□ 1.21
HDAC4-211ENST00000494800 CCDC191Q8NCU4 936 aa22.6■■□□□ 1.21
HDAC4-211ENST00000494800 METTL22Q9BUU2 404 aaPredicted RBP22.6■■□□□ 1.21
HDAC4-211ENST00000494800 MAP3K2Q9Y2U5 619 aa22.6■■□□□ 1.21
HDAC4-211ENST00000494800 CACNA1SQ13698 1873 aa22.6■■□□□ 1.21
HDAC4-211ENST00000494800 VAMP4O75379 141 aa22.59■■□□□ 1.21
HDAC4-211ENST00000494800 FKBP4Q02790 459 aaKnown RBP eCLIP22.59■■□□□ 1.21
HDAC4-211ENST00000494800 C3orf67Q6ZVT6 689 aa22.59■■□□□ 1.21
HDAC4-211ENST00000494800 DDX46Q7L014 1031 aaKnown RBP22.59■■□□□ 1.21
HDAC4-211ENST00000494800 FAM89AQ96GI7 184 aa22.59■■□□□ 1.21
HDAC4-211ENST00000494800 PI4KAP2A4QPH2 592 aa22.58■■□□□ 1.21
HDAC4-211ENST00000494800 DIEXFQ68CQ4 756 aaKnown RBP22.58■■□□□ 1.21
HDAC4-211ENST00000494800 PI4KAP1Q8N8J0 262 aa22.58■■□□□ 1.21
HDAC4-211ENST00000494800 SPINK5Q9NQ38 1064 aaPredicted RBP22.58■■□□□ 1.21
HDAC4-211ENST00000494800 CWC25Q9NXE8 425 aaPredicted RBP22.58■■□□□ 1.21
HDAC4-211ENST00000494800 SBF1O95248 1867 aa22.58■■□□□ 1.2
HDAC4-211ENST00000494800 ZNF521Q96K83 1311 aa22.57■■□□□ 1.2
HDAC4-211ENST00000494800 PRELPP51888 382 aa22.57■■□□□ 1.2
HDAC4-211ENST00000494800 DPY19L2Q6NUT2 758 aa22.57■■□□□ 1.2
HDAC4-211ENST00000494800 SYNE4Q8N205 404 aa22.57■■□□□ 1.2
HDAC4-211ENST00000494800 ZBTB38Q8NAP3 1195 aaPredicted RBP22.57■■□□□ 1.2
HDAC4-211ENST00000494800 ZNF428Q96B54 188 aa22.57■■□□□ 1.2
HDAC4-211ENST00000494800 FER1L6Q2WGJ9 1857 aa22.57■■□□□ 1.2
HDAC4-211ENST00000494800 E9PSI1 815 aa22.56■■□□□ 1.2
HDAC4-211ENST00000494800 BBOX1O75936 387 aa22.56■■□□□ 1.2
HDAC4-211ENST00000494800 FLIIQ13045 1269 aa22.56■■□□□ 1.2
HDAC4-211ENST00000494800 ABCC4O15439 1325 aa22.56■■□□□ 1.2
HDAC4-211ENST00000494800 IRS4O14654 1257 aaPredicted RBP22.55■■□□□ 1.2
HDAC4-211ENST00000494800 FKBP5Q13451 457 aaPredicted RBP22.55■■□□□ 1.2
HDAC4-211ENST00000494800 RTL5Q5HYW3 569 aaPredicted RBP22.55■■□□□ 1.2
HDAC4-211ENST00000494800 C16orf71Q8IYS4 520 aaPredicted RBP22.55■■□□□ 1.2
HDAC4-211ENST00000494800 PSMD1Q99460 953 aa22.55■■□□□ 1.2
HDAC4-211ENST00000494800 GLTPD2A6NH11 291 aa22.54■■□□□ 1.2
HDAC4-211ENST00000494800 OLFM4Q6UX06 510 aa22.54■■□□□ 1.2
HDAC4-211ENST00000494800 KIF3CO14782 793 aa22.53■■□□□ 1.2
HDAC4-211ENST00000494800 PCCAP05165 728 aaPredicted RBP22.53■■□□□ 1.2
HDAC4-211ENST00000494800 GRAPQ13588 217 aa22.53■■□□□ 1.2
HDAC4-211ENST00000494800 G2E3Q7L622 706 aa22.53■■□□□ 1.2
HDAC4-211ENST00000494800 TMC4Q7Z404 712 aa22.53■■□□□ 1.2
HDAC4-211ENST00000494800 GRAPLQ8TC17 118 aaPredicted RBP22.53■■□□□ 1.2
HDAC4-211ENST00000494800 NMRK2Q9NPI5 230 aa22.53■■□□□ 1.2
HDAC4-211ENST00000494800 ATP6V0A2Q9Y487 856 aa22.53■■□□□ 1.2
HDAC4-211ENST00000494800 TIAM2Q8IVF5 1701 aa22.52■■□□□ 1.2
HDAC4-211ENST00000494800 SF3B3Q15393 1217 aaKnown RBP22.52■■□□□ 1.2
HDAC4-211ENST00000494800 ZNF277Q9NRM2 450 aaPredicted RBP22.52■■□□□ 1.2
HDAC4-211ENST00000494800 IARSP41252 1262 aaKnown RBP22.51■■□□□ 1.19
HDAC4-211ENST00000494800 TOMM70O94826 608 aa22.5■■□□□ 1.19
HDAC4-211ENST00000494800 SP8Q8IXZ3 490 aa22.5■■□□□ 1.19
HDAC4-211ENST00000494800 SUPT20HQ8NEM7 779 aa22.5■■□□□ 1.19
HDAC4-211ENST00000494800 DNAAF4Q8WXU2 420 aa22.5■■□□□ 1.19
HDAC4-211ENST00000494800 JDP2Q8WYK2 163 aa22.5■■□□□ 1.19
HDAC4-211ENST00000494800 RRAGCQ9HB90 399 aa22.5■■□□□ 1.19
HDAC4-211ENST00000494800 PDE8AO60658 829 aa22.49■■□□□ 1.19
HDAC4-211ENST00000494800 NEURL1BA8MQ27 555 aa22.48■■□□□ 1.19
HDAC4-211ENST00000494800 IGKV5-2P06315 115 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms