RNA–Protein interactions for RNA: ENST00000494243.5

TTC3-224, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 861 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-224ENST00000494243 NEUROD2Q15784 382 aa31.33■■■□□ 2.61
TTC3-224ENST00000494243 C3orf67Q6ZVT6 689 aa31.33■■■□□ 2.61
TTC3-224ENST00000494243 RPGRQ92834 1020 aaKnown RBP31.33■■■□□ 2.61
TTC3-224ENST00000494243 TRIM35Q9UPQ4 493 aa31.33■■■□□ 2.61
TTC3-224ENST00000494243 CHL1O00533 1208 aa31.32■■■□□ 2.6
TTC3-224ENST00000494243 PPP1R42Q7Z4L9 355 aa31.32■■■□□ 2.6
TTC3-224ENST00000494243 RUNDC1Q96C34 613 aa31.32■■■□□ 2.6
TTC3-224ENST00000494243 PSMD1Q99460 953 aa31.32■■■□□ 2.6
TTC3-224ENST00000494243 IQCA1LA6NCM1 817 aa31.31■■■□□ 2.6
TTC3-224ENST00000494243 FZD9O00144 591 aa31.31■■■□□ 2.6
TTC3-224ENST00000494243 PARP10Q53GL7 1025 aa31.31■■■□□ 2.6
TTC3-224ENST00000494243 CC2D2BQ6DHV5 1058 aa31.31■■■□□ 2.6
TTC3-224ENST00000494243 CRAMP1Q96RY5 1269 aa31.31■■■□□ 2.6
TTC3-224ENST00000494243 TAF1DQ9H5J8 278 aaPredicted RBP31.31■■■□□ 2.6
TTC3-224ENST00000494243 KRT24Q2M2I5 525 aa31.3■■■□□ 2.6
TTC3-224ENST00000494243 NECTIN2Q92692 538 aa31.3■■■□□ 2.6
TTC3-224ENST00000494243 SCN4AP35499 1836 aa31.3■■■□□ 2.6
TTC3-224ENST00000494243 SLC10A5Q5PT55 438 aa31.29■■■□□ 2.6
TTC3-224ENST00000494243 COPS6Q7L5N1 327 aa31.29■■■□□ 2.6
TTC3-224ENST00000494243 SLC51AQ86UW1 340 aa31.29■■■□□ 2.6
TTC3-224ENST00000494243 ADAMTS8Q9UP79 889 aa31.29■■■□□ 2.6
TTC3-224ENST00000494243 RBM17Q96I25 401 aaKnown RBP31.28■■■□□ 2.6
TTC3-224ENST00000494243 XAGE3Q8WTP9 111 aa31.27■■■□□ 2.6
TTC3-224ENST00000494243 UTP14AQ9BVJ6 771 aaKnown RBP31.27■■■□□ 2.6
TTC3-224ENST00000494243 WDR43Q15061 677 aaKnown RBP eCLIP31.26■■■□□ 2.59
TTC3-224ENST00000494243 LDHDQ86WU2 507 aa31.26■■■□□ 2.59
TTC3-224ENST00000494243 COL4A5P29400 1685 aa31.25■■■□□ 2.59
TTC3-224ENST00000494243 AIMP1Q12904 312 aaKnown RBP31.25■■■□□ 2.59
TTC3-224ENST00000494243 NLRP3Q96P20 1036 aa31.25■■■□□ 2.59
TTC3-224ENST00000494243 DDX21Q9NR30 783 aaKnown RBP eCLIP31.25■■■□□ 2.59
TTC3-224ENST00000494243 PPEF1O14829 653 aaPredicted RBP31.24■■■□□ 2.59
TTC3-224ENST00000494243 GRIPAP1Q4V328 841 aa31.24■■■□□ 2.59
TTC3-224ENST00000494243 HACL1Q9UJ83 578 aa31.24■■■□□ 2.59
TTC3-224ENST00000494243 LAS1LQ9Y4W2 734 aaKnown RBP31.24■■■□□ 2.59
TTC3-224ENST00000494243 NLRP10Q86W26 655 aa31.23■■■□□ 2.59
TTC3-224ENST00000494243 JDP2Q8WYK2 163 aa31.23■■■□□ 2.59
TTC3-224ENST00000494243 TCERG1O14776 1098 aaKnown RBP31.22■■■□□ 2.59
TTC3-224ENST00000494243 GPC2Q8N158 579 aa31.22■■■□□ 2.59
TTC3-224ENST00000494243 CREBZFQ9NS37 354 aa31.22■■■□□ 2.59
TTC3-224ENST00000494243 PASKQ96RG2 1323 aa31.22■■■□□ 2.59
TTC3-224ENST00000494243 ANKRD36CQ5JPF3 1778 aa31.21■■■□□ 2.59
TTC3-224ENST00000494243 EPHX2P34913 555 aa31.21■■■□□ 2.59
TTC3-224ENST00000494243 TCIRG1Q13488 830 aa31.21■■■□□ 2.59
TTC3-224ENST00000494243 HSP90AB3PQ58FF7 597 aa31.21■■■□□ 2.59
TTC3-224ENST00000494243 PRKRIP1Q9H875 184 aaPredicted RBP31.21■■■□□ 2.59
TTC3-224ENST00000494243 RNF123Q5XPI4 1314 aa31.21■■■□□ 2.59
TTC3-224ENST00000494243 CHPF2Q9P2E5 772 aa31.2■■■□□ 2.59
TTC3-224ENST00000494243 ITGBL1O95965 494 aaPredicted RBP31.19■■■□□ 2.58
TTC3-224ENST00000494243 EAPPQ56P03 285 aaPredicted RBP31.19■■■□□ 2.58
TTC3-224ENST00000494243 ATP6V0A2Q9Y487 856 aa31.19■■■□□ 2.58
TTC3-224ENST00000494243 ADAMTSL1Q8N6G6 1762 aa31.18■■■□□ 2.58
TTC3-224ENST00000494243 HCLS1P14317 486 aaPredicted RBP31.17■■■□□ 2.58
TTC3-224ENST00000494243 COL13A1Q5TAT6 717 aaPredicted RBP31.17■■■□□ 2.58
TTC3-224ENST00000494243 LARGE2Q8N3Y3 721 aa31.17■■■□□ 2.58
TTC3-224ENST00000494243 ABCC4O15439 1325 aa31.17■■■□□ 2.58
TTC3-224ENST00000494243 HOXB7P09629 217 aa31.16■■■□□ 2.58
TTC3-224ENST00000494243 EIF6P56537 245 aaKnown RBP31.16■■■□□ 2.58
TTC3-224ENST00000494243 HDGFL1Q5TGJ6 251 aa31.16■■■□□ 2.58
TTC3-224ENST00000494243 CFAP44Q96MT7 982 aa31.16■■■□□ 2.58
TTC3-224ENST00000494243 LAMB2P55268 1798 aa31.15■■■□□ 2.58
TTC3-224ENST00000494243 PNMA8AQ86V59 439 aaPredicted RBP31.15■■■□□ 2.58
TTC3-224ENST00000494243 TRMT112Q9UI30 125 aaKnown RBP31.15■■■□□ 2.58
TTC3-224ENST00000494243 CLEC11AQ9Y240 323 aa31.14■■■□□ 2.58
TTC3-224ENST00000494243 GJA3Q9Y6H8 435 aa31.14■■■□□ 2.58
TTC3-224ENST00000494243 PCNTO95613 3336 aa31.14■■■□□ 2.58
TTC3-224ENST00000494243 HSPA1AP0DMV8 641 aaKnown RBP31.13■■■□□ 2.57
TTC3-224ENST00000494243 HSPA1BP0DMV9 641 aaKnown RBP31.13■■■□□ 2.57
TTC3-224ENST00000494243 PLBD2Q8NHP8 589 aa31.13■■■□□ 2.57
TTC3-224ENST00000494243 MKRN1Q9UHC7 482 aaKnown RBP31.13■■■□□ 2.57
TTC3-224ENST00000494243 BBOX1O75936 387 aa31.12■■■□□ 2.57
TTC3-224ENST00000494243 MBIPQ9NS73 344 aa31.12■■■□□ 2.57
TTC3-224ENST00000494243 DBF4Q9UBU7 674 aaPredicted RBP31.12■■■□□ 2.57
TTC3-224ENST00000494243 SH3TC1Q8TE82 1336 aa31.12■■■□□ 2.57
TTC3-224ENST00000494243 LTBP1Q14766 1721 aa31.12■■■□□ 2.57
TTC3-224ENST00000494243 ZNF853P0CG23 659 aa31.11■■■□□ 2.57
TTC3-224ENST00000494243 DUSP27Q5VZP5 1158 aa31.11■■■□□ 2.57
TTC3-224ENST00000494243 ANKRD13DQ6ZTN6 518 aa31.11■■■□□ 2.57
TTC3-224ENST00000494243 SP8Q8IXZ3 490 aa31.11■■■□□ 2.57
TTC3-224ENST00000494243 RTFDC1Q9BY42 306 aaPredicted RBP31.11■■■□□ 2.57
TTC3-224ENST00000494243 PPIP5K2O43314 1243 aa31.1■■■□□ 2.57
TTC3-224ENST00000494243 SCNN1DP51172 638 aa31.1■■■□□ 2.57
TTC3-224ENST00000494243 AOC3Q16853 763 aa31.1■■■□□ 2.57
TTC3-224ENST00000494243 MAP1SQ66K74 1059 aaPredicted RBP31.1■■■□□ 2.57
TTC3-224ENST00000494243 ZNF428Q96B54 188 aa31.1■■■□□ 2.57
TTC3-224ENST00000494243 ISCA1Q9BUE6 129 aa31.1■■■□□ 2.57
TTC3-224ENST00000494243 TMX4Q9H1E5 349 aaPredicted RBP31.1■■■□□ 2.57
TTC3-224ENST00000494243 VPS33BQ9H267 617 aa31.1■■■□□ 2.57
TTC3-224ENST00000494243 NIM1KQ8IY84 436 aa31.09■■■□□ 2.57
TTC3-224ENST00000494243 CNTROBQ8N137 903 aa31.09■■■□□ 2.57
TTC3-224ENST00000494243 CNTNAP1P78357 1384 aa31.08■■■□□ 2.57
TTC3-224ENST00000494243 APAF1O14727 1248 aa31.08■■■□□ 2.57
TTC3-224ENST00000494243 EPS15P42566 896 aa31.08■■■□□ 2.57
TTC3-224ENST00000494243 TMEM88BA6NKF7 163 aa31.07■■■□□ 2.56
TTC3-224ENST00000494243 DDX46Q7L014 1031 aaKnown RBP31.07■■■□□ 2.56
TTC3-224ENST00000494243 HYPKQ9NX55 129 aa31.07■■■□□ 2.56
TTC3-224ENST00000494243 GRAPQ13588 217 aa31.06■■■□□ 2.56
TTC3-224ENST00000494243 GRAPLQ8TC17 118 aaPredicted RBP31.06■■■□□ 2.56
TTC3-224ENST00000494243 ATP5J2-PTCD1G3V325 749 aa31.05■■■□□ 2.56
TTC3-224ENST00000494243 LMOD1P29536 600 aaPredicted RBP31.05■■■□□ 2.56
TTC3-224ENST00000494243 DPP8Q6V1X1 898 aaPredicted RBP31.05■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms