RNA–Protein interactions for RNA: ENST00000494195.1

HMGB3P14-201, Transcript of high mobility group box 3 pseudogene 14, humanhuman

BASIC

Gene HMGB3P14, Length 599 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P14-201ENST00000494195 ADAMTS2O95450 1211 aa13.33□□□□□ -0.28
HMGB3P14-201ENST00000494195 SERPINB4P48594 390 aa13.33□□□□□ -0.28
HMGB3P14-201ENST00000494195 SF3B2Q13435 895 aaKnown RBP13.33□□□□□ -0.28
HMGB3P14-201ENST00000494195 SLURP2P0DP57 97 aa13.32□□□□□ -0.28
HMGB3P14-201ENST00000494195 ZNF211Q13398 564 aaPredicted RBP13.32□□□□□ -0.28
HMGB3P14-201ENST00000494195 MTMR3Q13615 1198 aa13.32□□□□□ -0.28
HMGB3P14-201ENST00000494195 OPLAHO14841 1288 aa13.31□□□□□ -0.28
HMGB3P14-201ENST00000494195 FKBP4Q02790 459 aaKnown RBP eCLIP13.31□□□□□ -0.28
HMGB3P14-201ENST00000494195 GNEQ9Y223 722 aaKnown RBP13.31□□□□□ -0.28
HMGB3P14-201ENST00000494195 NPR3P17342 541 aa13.3□□□□□ -0.28
HMGB3P14-201ENST00000494195 KCNA1Q09470 495 aa13.3□□□□□ -0.28
HMGB3P14-201ENST00000494195 ANO2Q9NQ90 1003 aa13.3□□□□□ -0.28
HMGB3P14-201ENST00000494195 ZBTB39O15060 712 aa13.29□□□□□ -0.28
HMGB3P14-201ENST00000494195 MPSTP25325 297 aa13.29□□□□□ -0.28
HMGB3P14-201ENST00000494195 GRNP28799 593 aaKnown RBP13.29□□□□□ -0.28
HMGB3P14-201ENST00000494195 ZAP70P43403 619 aa13.29□□□□□ -0.28
HMGB3P14-201ENST00000494195 SPEM2Q0P670 501 aa13.29□□□□□ -0.28
HMGB3P14-201ENST00000494195 GRIN2CQ14957 1233 aa13.29□□□□□ -0.28
HMGB3P14-201ENST00000494195 FAM13BQ9NYF5 915 aa13.29□□□□□ -0.28
HMGB3P14-201ENST00000494195 ICMTO60725 284 aa13.28□□□□□ -0.28
HMGB3P14-201ENST00000494195 FAM13AO94988 1023 aa13.28□□□□□ -0.28
HMGB3P14-201ENST00000494195 NOM1Q5C9Z4 860 aaKnown RBP13.28□□□□□ -0.28
HMGB3P14-201ENST00000494195 C11orf16Q9NQ32 467 aa13.28□□□□□ -0.28
HMGB3P14-201ENST00000494195 PRR12Q9ULL5 1215 aa13.28□□□□□ -0.28
HMGB3P14-201ENST00000494195 RTCBQ9Y3I0 505 aaKnown RBP13.28□□□□□ -0.28
HMGB3P14-201ENST00000494195 RGL4Q8IZJ4 473 aa13.27□□□□□ -0.29
HMGB3P14-201ENST00000494195 SLC30A3Q99726 388 aa13.27□□□□□ -0.29
HMGB3P14-201ENST00000494195 OXCT2Q9BYC2 517 aaPredicted RBP13.27□□□□□ -0.29
HMGB3P14-201ENST00000494195 AVENQ9NQS1 362 aaPredicted RBP13.27□□□□□ -0.29
HMGB3P14-201ENST00000494195 PATL2C9JE40 543 aaKnown RBP13.26□□□□□ -0.29
HMGB3P14-201ENST00000494195 H3BRB1 525 aa13.26□□□□□ -0.29
HMGB3P14-201ENST00000494195 ARAFP10398 606 aa13.26□□□□□ -0.29
HMGB3P14-201ENST00000494195 EIF1AXP47813 144 aaKnown RBP13.26□□□□□ -0.29
HMGB3P14-201ENST00000494195 INSM1Q01101 510 aaPredicted RBP13.26□□□□□ -0.29
HMGB3P14-201ENST00000494195 ZNF468Q5VIY5 522 aaPredicted RBP13.26□□□□□ -0.29
HMGB3P14-201ENST00000494195 ALKBH2Q6NS38 261 aa13.26□□□□□ -0.29
HMGB3P14-201ENST00000494195 HOMEZQ8IX15 550 aa13.26□□□□□ -0.29
HMGB3P14-201ENST00000494195 TUT1Q9H6E5 874 aaKnown RBP13.26□□□□□ -0.29
HMGB3P14-201ENST00000494195 USP20Q9Y2K6 914 aa13.26□□□□□ -0.29
HMGB3P14-201ENST00000494195 NEUROD1Q13562 356 aa13.25□□□□□ -0.29
HMGB3P14-201ENST00000494195 PIK3R5Q8WYR1 880 aa13.25□□□□□ -0.29
HMGB3P14-201ENST00000494195 ACDQ96AP0 544 aa13.25□□□□□ -0.29
HMGB3P14-201ENST00000494195 GDF2Q9UK05 429 aaPredicted RBP13.25□□□□□ -0.29
HMGB3P14-201ENST00000494195 CCINQ13939 588 aa13.24□□□□□ -0.29
HMGB3P14-201ENST00000494195 ATCAYQ86WG3 371 aa13.24□□□□□ -0.29
HMGB3P14-201ENST00000494195 GLYCTKQ8IVS8 523 aa13.24□□□□□ -0.29
HMGB3P14-201ENST00000494195 CMTR1Q8N1G2 835 aaKnown RBP13.24□□□□□ -0.29
HMGB3P14-201ENST00000494195 GSX2Q9BZM3 304 aa13.24□□□□□ -0.29
HMGB3P14-201ENST00000494195 EFCC1Q9HA90 598 aa13.24□□□□□ -0.29
HMGB3P14-201ENST00000494195 GOLGA6L1Q8N7Z2 621 aa13.23□□□□□ -0.29
HMGB3P14-201ENST00000494195 GPR152Q8TDT2 470 aa13.23□□□□□ -0.29
HMGB3P14-201ENST00000494195 ADH6P28332 368 aa13.22□□□□□ -0.29
HMGB3P14-201ENST00000494195 KCTD17Q8N5Z5 321 aa13.22□□□□□ -0.29
HMGB3P14-201ENST00000494195 ZSCAN1Q8NBB4 408 aa13.22□□□□□ -0.29
HMGB3P14-201ENST00000494195 KCNMB2Q9Y691 235 aa13.22□□□□□ -0.29
HMGB3P14-201ENST00000494195 IVNS1ABPQ9Y6Y0 642 aa13.22□□□□□ -0.29
HMGB3P14-201ENST00000494195 EGFRP00533 1210 aa13.21□□□□□ -0.29
HMGB3P14-201ENST00000494195 LORP23490 312 aaPredicted RBP13.21□□□□□ -0.29
HMGB3P14-201ENST00000494195 RAB44Q7Z6P3 723 aaPredicted RBP13.21□□□□□ -0.29
HMGB3P14-201ENST00000494195 SYT9Q86SS6 491 aa13.21□□□□□ -0.29
HMGB3P14-201ENST00000494195 GGA1Q9UJY5 639 aa13.21□□□□□ -0.29
HMGB3P14-201ENST00000494195 SOWAHDA6NJG2 315 aa13.2□□□□□ -0.3
HMGB3P14-201ENST00000494195 XYLBO75191 536 aa13.2□□□□□ -0.3
HMGB3P14-201ENST00000494195 PCBP4P57723 403 aaKnown RBP13.2□□□□□ -0.3
HMGB3P14-201ENST00000494195 LYPD4Q6UWN0 246 aa13.2□□□□□ -0.3
HMGB3P14-201ENST00000494195 SLCO4C1Q6ZQN7 724 aa13.2□□□□□ -0.3
HMGB3P14-201ENST00000494195 AEBP1Q8IUX7 1158 aa13.2□□□□□ -0.3
HMGB3P14-201ENST00000494195 WHAMMQ8TF30 809 aa13.2□□□□□ -0.3
HMGB3P14-201ENST00000494195 BHMTQ93088 406 aa13.2□□□□□ -0.3
HMGB3P14-201ENST00000494195 PNMA5Q96PV4 448 aa13.2□□□□□ -0.3
HMGB3P14-201ENST00000494195 KLF15Q9UIH9 416 aa13.2□□□□□ -0.3
HMGB3P14-201ENST00000494195 NEURL1BA8MQ27 555 aa13.19□□□□□ -0.3
HMGB3P14-201ENST00000494195 SIN3BO75182 1162 aa13.19□□□□□ -0.3
HMGB3P14-201ENST00000494195 CELA2BP08218 269 aaPredicted RBP13.19□□□□□ -0.3
HMGB3P14-201ENST00000494195 BCRP11274 1271 aa13.19□□□□□ -0.3
HMGB3P14-201ENST00000494195 AAMPQ13685 434 aa13.19□□□□□ -0.3
HMGB3P14-201ENST00000494195 ZNF385CQ66K41 422 aaPredicted RBP13.19□□□□□ -0.3
HMGB3P14-201ENST00000494195 EDEM1Q92611 657 aa13.19□□□□□ -0.3
HMGB3P14-201ENST00000494195 LRRC4BQ9NT99 713 aa13.19□□□□□ -0.3
HMGB3P14-201ENST00000494195 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.19□□□□□ -0.3
HMGB3P14-201ENST00000494195 MZF1P28698 734 aaPredicted RBP13.18□□□□□ -0.3
HMGB3P14-201ENST00000494195 TRIP4Q15650 581 aaPredicted RBP13.18□□□□□ -0.3
HMGB3P14-201ENST00000494195 ECM1Q16610 540 aa13.18□□□□□ -0.3
HMGB3P14-201ENST00000494195 NUDT16Q96DE0 195 aaKnown RBP13.18□□□□□ -0.3
HMGB3P14-201ENST00000494195 FNDC3AQ9Y2H6 1198 aaKnown RBP13.18□□□□□ -0.3
HMGB3P14-201ENST00000494195 RPLP1P05386 114 aaKnown RBP13.17□□□□□ -0.3
HMGB3P14-201ENST00000494195 PCSK2P16519 638 aa13.17□□□□□ -0.3
HMGB3P14-201ENST00000494195 NFKB1P19838 968 aa13.17□□□□□ -0.3
HMGB3P14-201ENST00000494195 DNM1Q05193 864 aaKnown RBP13.17□□□□□ -0.3
HMGB3P14-201ENST00000494195 SVOPQ8N4V2 548 aa13.17□□□□□ -0.3
HMGB3P14-201ENST00000494195 UBAP1LF5GYI3 381 aa13.16□□□□□ -0.3
HMGB3P14-201ENST00000494195 OIP5O43482 229 aa13.16□□□□□ -0.3
HMGB3P14-201ENST00000494195 FZD6O60353 706 aa13.16□□□□□ -0.3
HMGB3P14-201ENST00000494195 SASH3O75995 380 aa13.16□□□□□ -0.3
HMGB3P14-201ENST00000494195 PDGFAP04085 211 aa13.16□□□□□ -0.3
HMGB3P14-201ENST00000494195 MAP3K10Q02779 954 aa13.16□□□□□ -0.3
HMGB3P14-201ENST00000494195 FCHSD1Q86WN1 690 aa13.16□□□□□ -0.3
HMGB3P14-201ENST00000494195 ARHGAP4P98171 946 aa13.15□□□□□ -0.3
HMGB3P14-201ENST00000494195 KRT25Q7Z3Z0 450 aa13.15□□□□□ -0.3
HMGB3P14-201ENST00000494195 TARSP26639 723 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms