RNA–Protein interactions for RNA: ENST00000494195.1

HMGB3P14-201, Transcript of high mobility group box 3 pseudogene 14, humanhuman

BASIC

Gene HMGB3P14, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P14-201ENST00000494195 ADAMTS2O95450 1211 aa13.33□□□□□ -0.28
HMGB3P14-201ENST00000494195 SERPINB4P48594 390 aa13.33□□□□□ -0.28
HMGB3P14-201ENST00000494195 SF3B2Q13435 895 aaKnown RBP13.33□□□□□ -0.28
HMGB3P14-201ENST00000494195 SLURP2P0DP57 97 aa13.32□□□□□ -0.28
HMGB3P14-201ENST00000494195 ZNF211Q13398 564 aaPredicted RBP13.32□□□□□ -0.28
HMGB3P14-201ENST00000494195 MTMR3Q13615 1198 aa13.32□□□□□ -0.28
HMGB3P14-201ENST00000494195 OPLAHO14841 1288 aa13.31□□□□□ -0.28
HMGB3P14-201ENST00000494195 FKBP4Q02790 459 aaKnown RBP eCLIP13.31□□□□□ -0.28
HMGB3P14-201ENST00000494195 GNEQ9Y223 722 aaKnown RBP13.31□□□□□ -0.28
HMGB3P14-201ENST00000494195 NPR3P17342 541 aa13.3□□□□□ -0.28
HMGB3P14-201ENST00000494195 KCNA1Q09470 495 aa13.3□□□□□ -0.28
HMGB3P14-201ENST00000494195 ANO2Q9NQ90 1003 aa13.3□□□□□ -0.28
HMGB3P14-201ENST00000494195 ZBTB39O15060 712 aa13.29□□□□□ -0.28
HMGB3P14-201ENST00000494195 MPSTP25325 297 aa13.29□□□□□ -0.28
HMGB3P14-201ENST00000494195 GRNP28799 593 aaKnown RBP13.29□□□□□ -0.28
HMGB3P14-201ENST00000494195 ZAP70P43403 619 aa13.29□□□□□ -0.28
HMGB3P14-201ENST00000494195 SPEM2Q0P670 501 aa13.29□□□□□ -0.28
HMGB3P14-201ENST00000494195 GRIN2CQ14957 1233 aa13.29□□□□□ -0.28
HMGB3P14-201ENST00000494195 FAM13BQ9NYF5 915 aa13.29□□□□□ -0.28
HMGB3P14-201ENST00000494195 ICMTO60725 284 aa13.28□□□□□ -0.28
HMGB3P14-201ENST00000494195 FAM13AO94988 1023 aa13.28□□□□□ -0.28
HMGB3P14-201ENST00000494195 NOM1Q5C9Z4 860 aaKnown RBP13.28□□□□□ -0.28
HMGB3P14-201ENST00000494195 C11orf16Q9NQ32 467 aa13.28□□□□□ -0.28
HMGB3P14-201ENST00000494195 PRR12Q9ULL5 1215 aa13.28□□□□□ -0.28
HMGB3P14-201ENST00000494195 RTCBQ9Y3I0 505 aaKnown RBP13.28□□□□□ -0.28
HMGB3P14-201ENST00000494195 RGL4Q8IZJ4 473 aa13.27□□□□□ -0.29
HMGB3P14-201ENST00000494195 SLC30A3Q99726 388 aa13.27□□□□□ -0.29
HMGB3P14-201ENST00000494195 OXCT2Q9BYC2 517 aaPredicted RBP13.27□□□□□ -0.29
HMGB3P14-201ENST00000494195 AVENQ9NQS1 362 aaPredicted RBP13.27□□□□□ -0.29
HMGB3P14-201ENST00000494195 PATL2C9JE40 543 aaKnown RBP13.26□□□□□ -0.29
HMGB3P14-201ENST00000494195 H3BRB1 525 aa13.26□□□□□ -0.29
HMGB3P14-201ENST00000494195 ARAFP10398 606 aa13.26□□□□□ -0.29
HMGB3P14-201ENST00000494195 EIF1AXP47813 144 aaKnown RBP13.26□□□□□ -0.29
HMGB3P14-201ENST00000494195 INSM1Q01101 510 aaPredicted RBP13.26□□□□□ -0.29
HMGB3P14-201ENST00000494195 ZNF468Q5VIY5 522 aaPredicted RBP13.26□□□□□ -0.29
HMGB3P14-201ENST00000494195 ALKBH2Q6NS38 261 aa13.26□□□□□ -0.29
HMGB3P14-201ENST00000494195 HOMEZQ8IX15 550 aa13.26□□□□□ -0.29
HMGB3P14-201ENST00000494195 TUT1Q9H6E5 874 aaKnown RBP13.26□□□□□ -0.29
HMGB3P14-201ENST00000494195 USP20Q9Y2K6 914 aa13.26□□□□□ -0.29
HMGB3P14-201ENST00000494195 NEUROD1Q13562 356 aa13.25□□□□□ -0.29
HMGB3P14-201ENST00000494195 PIK3R5Q8WYR1 880 aa13.25□□□□□ -0.29
HMGB3P14-201ENST00000494195 ACDQ96AP0 544 aa13.25□□□□□ -0.29
HMGB3P14-201ENST00000494195 GDF2Q9UK05 429 aaPredicted RBP13.25□□□□□ -0.29
HMGB3P14-201ENST00000494195 CCINQ13939 588 aa13.24□□□□□ -0.29
HMGB3P14-201ENST00000494195 ATCAYQ86WG3 371 aa13.24□□□□□ -0.29
HMGB3P14-201ENST00000494195 GLYCTKQ8IVS8 523 aa13.24□□□□□ -0.29
HMGB3P14-201ENST00000494195 CMTR1Q8N1G2 835 aaKnown RBP13.24□□□□□ -0.29
HMGB3P14-201ENST00000494195 GSX2Q9BZM3 304 aa13.24□□□□□ -0.29
HMGB3P14-201ENST00000494195 EFCC1Q9HA90 598 aa13.24□□□□□ -0.29
HMGB3P14-201ENST00000494195 GOLGA6L1Q8N7Z2 621 aa13.23□□□□□ -0.29
HMGB3P14-201ENST00000494195 GPR152Q8TDT2 470 aa13.23□□□□□ -0.29
HMGB3P14-201ENST00000494195 ADH6P28332 368 aa13.22□□□□□ -0.29
HMGB3P14-201ENST00000494195 KCTD17Q8N5Z5 321 aa13.22□□□□□ -0.29
HMGB3P14-201ENST00000494195 ZSCAN1Q8NBB4 408 aa13.22□□□□□ -0.29
HMGB3P14-201ENST00000494195 KCNMB2Q9Y691 235 aa13.22□□□□□ -0.29
HMGB3P14-201ENST00000494195 IVNS1ABPQ9Y6Y0 642 aa13.22□□□□□ -0.29
HMGB3P14-201ENST00000494195 EGFRP00533 1210 aa13.21□□□□□ -0.29
HMGB3P14-201ENST00000494195 LORP23490 312 aaPredicted RBP13.21□□□□□ -0.29
HMGB3P14-201ENST00000494195 RAB44Q7Z6P3 723 aaPredicted RBP13.21□□□□□ -0.29
HMGB3P14-201ENST00000494195 SYT9Q86SS6 491 aa13.21□□□□□ -0.29
HMGB3P14-201ENST00000494195 GGA1Q9UJY5 639 aa13.21□□□□□ -0.29
HMGB3P14-201ENST00000494195 SOWAHDA6NJG2 315 aa13.2□□□□□ -0.3
HMGB3P14-201ENST00000494195 XYLBO75191 536 aa13.2□□□□□ -0.3
HMGB3P14-201ENST00000494195 PCBP4P57723 403 aaKnown RBP13.2□□□□□ -0.3
HMGB3P14-201ENST00000494195 LYPD4Q6UWN0 246 aa13.2□□□□□ -0.3
HMGB3P14-201ENST00000494195 SLCO4C1Q6ZQN7 724 aa13.2□□□□□ -0.3
HMGB3P14-201ENST00000494195 AEBP1Q8IUX7 1158 aa13.2□□□□□ -0.3
HMGB3P14-201ENST00000494195 WHAMMQ8TF30 809 aa13.2□□□□□ -0.3
HMGB3P14-201ENST00000494195 BHMTQ93088 406 aa13.2□□□□□ -0.3
HMGB3P14-201ENST00000494195 PNMA5Q96PV4 448 aa13.2□□□□□ -0.3
HMGB3P14-201ENST00000494195 KLF15Q9UIH9 416 aa13.2□□□□□ -0.3
HMGB3P14-201ENST00000494195 NEURL1BA8MQ27 555 aa13.19□□□□□ -0.3
HMGB3P14-201ENST00000494195 SIN3BO75182 1162 aa13.19□□□□□ -0.3
HMGB3P14-201ENST00000494195 CELA2BP08218 269 aaPredicted RBP13.19□□□□□ -0.3
HMGB3P14-201ENST00000494195 BCRP11274 1271 aa13.19□□□□□ -0.3
HMGB3P14-201ENST00000494195 AAMPQ13685 434 aa13.19□□□□□ -0.3
HMGB3P14-201ENST00000494195 ZNF385CQ66K41 422 aaPredicted RBP13.19□□□□□ -0.3
HMGB3P14-201ENST00000494195 EDEM1Q92611 657 aa13.19□□□□□ -0.3
HMGB3P14-201ENST00000494195 LRRC4BQ9NT99 713 aa13.19□□□□□ -0.3
HMGB3P14-201ENST00000494195 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.19□□□□□ -0.3
HMGB3P14-201ENST00000494195 MZF1P28698 734 aaPredicted RBP13.18□□□□□ -0.3
HMGB3P14-201ENST00000494195 TRIP4Q15650 581 aaPredicted RBP13.18□□□□□ -0.3
HMGB3P14-201ENST00000494195 ECM1Q16610 540 aa13.18□□□□□ -0.3
HMGB3P14-201ENST00000494195 NUDT16Q96DE0 195 aaKnown RBP13.18□□□□□ -0.3
HMGB3P14-201ENST00000494195 FNDC3AQ9Y2H6 1198 aaKnown RBP13.18□□□□□ -0.3
HMGB3P14-201ENST00000494195 RPLP1P05386 114 aaKnown RBP13.17□□□□□ -0.3
HMGB3P14-201ENST00000494195 PCSK2P16519 638 aa13.17□□□□□ -0.3
HMGB3P14-201ENST00000494195 NFKB1P19838 968 aa13.17□□□□□ -0.3
HMGB3P14-201ENST00000494195 DNM1Q05193 864 aaKnown RBP13.17□□□□□ -0.3
HMGB3P14-201ENST00000494195 SVOPQ8N4V2 548 aa13.17□□□□□ -0.3
HMGB3P14-201ENST00000494195 UBAP1LF5GYI3 381 aa13.16□□□□□ -0.3
HMGB3P14-201ENST00000494195 OIP5O43482 229 aa13.16□□□□□ -0.3
HMGB3P14-201ENST00000494195 FZD6O60353 706 aa13.16□□□□□ -0.3
HMGB3P14-201ENST00000494195 SASH3O75995 380 aa13.16□□□□□ -0.3
HMGB3P14-201ENST00000494195 PDGFAP04085 211 aa13.16□□□□□ -0.3
HMGB3P14-201ENST00000494195 MAP3K10Q02779 954 aa13.16□□□□□ -0.3
HMGB3P14-201ENST00000494195 FCHSD1Q86WN1 690 aa13.16□□□□□ -0.3
HMGB3P14-201ENST00000494195 ARHGAP4P98171 946 aa13.15□□□□□ -0.3
HMGB3P14-201ENST00000494195 KRT25Q7Z3Z0 450 aa13.15□□□□□ -0.3
HMGB3P14-201ENST00000494195 TARSP26639 723 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms