RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 IFT43Q96FT9 208 aa8.37□□□□□ -1.07
ITGB1-216ENST00000493758 MTMR7Q9Y216 660 aa8.37□□□□□ -1.07
ITGB1-216ENST00000493758 OIP5O43482 229 aa8.36□□□□□ -1.07
ITGB1-216ENST00000493758 SIN3BO75182 1162 aa8.36□□□□□ -1.07
ITGB1-216ENST00000493758 BCRP11274 1271 aa8.36□□□□□ -1.07
ITGB1-216ENST00000493758 BRD2P25440 801 aaKnown RBP8.36□□□□□ -1.07
ITGB1-216ENST00000493758 GRNP28799 593 aaKnown RBP8.36□□□□□ -1.07
ITGB1-216ENST00000493758 SFSWAPQ12872 951 aaKnown RBP8.36□□□□□ -1.07
ITGB1-216ENST00000493758 LYPD4Q6UWN0 246 aa8.36□□□□□ -1.07
ITGB1-216ENST00000493758 ETFBKMTQ8IXQ9 262 aa8.36□□□□□ -1.07
ITGB1-216ENST00000493758 ABTB2Q8N961 1025 aa8.36□□□□□ -1.07
ITGB1-216ENST00000493758 STIM2Q9P246 746 aa8.36□□□□□ -1.07
ITGB1-216ENST00000493758 SEPT3Q9UH03 358 aa8.36□□□□□ -1.07
ITGB1-216ENST00000493758 EGFL7Q9UHF1 273 aa8.36□□□□□ -1.07
ITGB1-216ENST00000493758 EGFRP00533 1210 aa8.35□□□□□ -1.07
ITGB1-216ENST00000493758 NPR3P17342 541 aa8.35□□□□□ -1.07
ITGB1-216ENST00000493758 SPEM2Q0P670 501 aa8.35□□□□□ -1.07
ITGB1-216ENST00000493758 SVOPQ8N4V2 548 aa8.35□□□□□ -1.07
ITGB1-216ENST00000493758 WHAMMQ8TF30 809 aa8.35□□□□□ -1.07
ITGB1-216ENST00000493758 CARNS1A5YM72 827 aa8.34□□□□□ -1.07
ITGB1-216ENST00000493758 TREML1Q86YW5 311 aa8.34□□□□□ -1.07
ITGB1-216ENST00000493758 TNFRSF25Q93038 417 aa8.34□□□□□ -1.07
ITGB1-216ENST00000493758 ADARB2-AS1A8MUL3 147 aa8.33□□□□□ -1.08
ITGB1-216ENST00000493758 OPLAHO14841 1288 aa8.33□□□□□ -1.08
ITGB1-216ENST00000493758 EPXP11678 715 aa8.33□□□□□ -1.08
ITGB1-216ENST00000493758 MAP3K10Q02779 954 aa8.33□□□□□ -1.08
ITGB1-216ENST00000493758 SF3B2Q13435 895 aaKnown RBP8.33□□□□□ -1.08
ITGB1-216ENST00000493758 NEUROD1Q13562 356 aa8.33□□□□□ -1.08
ITGB1-216ENST00000493758 FAM26DQ5JW98 314 aa8.33□□□□□ -1.08
ITGB1-216ENST00000493758 SLC30A3Q99726 388 aa8.33□□□□□ -1.08
ITGB1-216ENST00000493758 FAM13BQ9NYF5 915 aa8.33□□□□□ -1.08
ITGB1-216ENST00000493758 KLF15Q9UIH9 416 aa8.33□□□□□ -1.08
ITGB1-216ENST00000493758 GGA1Q9UJY5 639 aa8.33□□□□□ -1.08
ITGB1-216ENST00000493758 NAA30Q147X3 362 aaPredicted RBP8.32□□□□□ -1.08
ITGB1-216ENST00000493758 FCHSD1Q86WN1 690 aa8.32□□□□□ -1.08
ITGB1-216ENST00000493758 ENAMQ9NRM1 1142 aa8.32□□□□□ -1.08
ITGB1-216ENST00000493758 MAP3K6O95382 1288 aa8.31□□□□□ -1.08
ITGB1-216ENST00000493758 BRD1O95696 1058 aa8.31□□□□□ -1.08
ITGB1-216ENST00000493758 ARID4AP29374 1257 aaPredicted RBP8.31□□□□□ -1.08
ITGB1-216ENST00000493758 GRIN2CQ14957 1233 aa8.31□□□□□ -1.08
ITGB1-216ENST00000493758 TXNDC2Q86VQ3 553 aa8.31□□□□□ -1.08
ITGB1-216ENST00000493758 GTF3C2Q8WUA4 911 aaPredicted RBP8.31□□□□□ -1.08
ITGB1-216ENST00000493758 GSX2Q9BZM3 304 aa8.31□□□□□ -1.08
ITGB1-216ENST00000493758 PRR12Q9ULL5 1215 aa8.31□□□□□ -1.08
ITGB1-216ENST00000493758 CCINQ13939 588 aa8.3□□□□□ -1.08
ITGB1-216ENST00000493758 C1orf229Q6ZS94 237 aaPredicted RBP8.3□□□□□ -1.08
ITGB1-216ENST00000493758 SYT9Q86SS6 491 aa8.3□□□□□ -1.08
ITGB1-216ENST00000493758 GNEQ9Y223 722 aaKnown RBP8.3□□□□□ -1.08
ITGB1-216ENST00000493758 RTCBQ9Y3I0 505 aaKnown RBP8.3□□□□□ -1.08
ITGB1-216ENST00000493758 DNMT3AQ9Y6K1 912 aaPredicted RBP8.3□□□□□ -1.08
ITGB1-216ENST00000493758 HOXD8P13378 290 aaPredicted RBP8.29□□□□□ -1.08
ITGB1-216ENST00000493758 SCNN1AP37088 669 aa8.29□□□□□ -1.08
ITGB1-216ENST00000493758 ZAP70P43403 619 aa8.29□□□□□ -1.08
ITGB1-216ENST00000493758 TRAIPQ9BWF2 469 aa8.29□□□□□ -1.08
ITGB1-216ENST00000493758 KCNMB2Q9Y691 235 aa8.29□□□□□ -1.08
ITGB1-216ENST00000493758 ELOA3CA0A087WX78 387 aaPredicted RBP8.28□□□□□ -1.08
ITGB1-216ENST00000493758 ELOA3DA6NLF2 546 aaPredicted RBP8.28□□□□□ -1.08
ITGB1-216ENST00000493758 NEURL1BA8MQ27 555 aa8.28□□□□□ -1.08
ITGB1-216ENST00000493758 SHISA8B8ZZ34 492 aa8.28□□□□□ -1.08
ITGB1-216ENST00000493758 ELOA3BQ3SY89 546 aa8.28□□□□□ -1.08
ITGB1-216ENST00000493758 ELOA3Q8NG57 546 aa8.28□□□□□ -1.08
ITGB1-216ENST00000493758 EDARADDQ8WWZ3 215 aa8.28□□□□□ -1.08
ITGB1-216ENST00000493758 FAM13AO94988 1023 aa8.27□□□□□ -1.09
ITGB1-216ENST00000493758 PCBP4P57723 403 aaKnown RBP8.27□□□□□ -1.09
ITGB1-216ENST00000493758 ALKBH2Q6NS38 261 aa8.27□□□□□ -1.09
ITGB1-216ENST00000493758 KANK3Q6NY19 840 aa8.27□□□□□ -1.09
ITGB1-216ENST00000493758 PIK3R5Q8WYR1 880 aa8.27□□□□□ -1.09
ITGB1-216ENST00000493758 ADAMTS8Q9UP79 889 aa8.27□□□□□ -1.09
ITGB1-216ENST00000493758 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.27□□□□□ -1.09
ITGB1-216ENST00000493758 ZBTB39O15060 712 aa8.26□□□□□ -1.09
ITGB1-216ENST00000493758 ICMTO60725 284 aa8.26□□□□□ -1.09
ITGB1-216ENST00000493758 HOXB4P17483 251 aaPredicted RBP8.26□□□□□ -1.09
ITGB1-216ENST00000493758 MPSTP25325 297 aa8.26□□□□□ -1.09
ITGB1-216ENST00000493758 TRIP4Q15650 581 aaPredicted RBP8.26□□□□□ -1.09
ITGB1-216ENST00000493758 RGL4Q8IZJ4 473 aa8.26□□□□□ -1.09
ITGB1-216ENST00000493758 GALNT6Q8NCL4 622 aa8.26□□□□□ -1.09
ITGB1-216ENST00000493758 XYLBO75191 536 aa8.25□□□□□ -1.09
ITGB1-216ENST00000493758 RPLP1P05386 114 aaKnown RBP8.25□□□□□ -1.09
ITGB1-216ENST00000493758 NFKB1P19838 968 aa8.25□□□□□ -1.09
ITGB1-216ENST00000493758 SOX18P35713 384 aa8.25□□□□□ -1.09
ITGB1-216ENST00000493758 EIF1AXP47813 144 aaKnown RBP8.25□□□□□ -1.09
ITGB1-216ENST00000493758 DGKGP49619 791 aa8.25□□□□□ -1.09
ITGB1-216ENST00000493758 FKBP4Q02790 459 aaKnown RBP eCLIP8.25□□□□□ -1.09
ITGB1-216ENST00000493758 NOM1Q5C9Z4 860 aaKnown RBP8.25□□□□□ -1.09
ITGB1-216ENST00000493758 RNF225M0QZC1 329 aaPredicted RBP8.24□□□□□ -1.09
ITGB1-216ENST00000493758 ADH7P40394 386 aa8.24□□□□□ -1.09
ITGB1-216ENST00000493758 PCSK7Q16549 785 aa8.24□□□□□ -1.09
ITGB1-216ENST00000493758 CHSY3Q70JA7 882 aa8.24□□□□□ -1.09
ITGB1-216ENST00000493758 RAB44Q7Z6P3 723 aaPredicted RBP8.24□□□□□ -1.09
ITGB1-216ENST00000493758 CCER1Q8TC90 406 aaPredicted RBP8.24□□□□□ -1.09
ITGB1-216ENST00000493758 BHMTQ93088 406 aa8.24□□□□□ -1.09
ITGB1-216ENST00000493758 PNMA5Q96PV4 448 aa8.24□□□□□ -1.09
ITGB1-216ENST00000493758 PRDM6Q9NQX0 595 aa8.24□□□□□ -1.09
ITGB1-216ENST00000493758 ZFATQ9P243 1243 aa8.24□□□□□ -1.09
ITGB1-216ENST00000493758 FNDC3AQ9Y2H6 1198 aaKnown RBP8.24□□□□□ -1.09
ITGB1-216ENST00000493758 MZF1P28698 734 aaPredicted RBP8.23□□□□□ -1.09
ITGB1-216ENST00000493758 SERPINB4P48594 390 aa8.23□□□□□ -1.09
ITGB1-216ENST00000493758 GPLD1P80108 840 aa8.23□□□□□ -1.09
ITGB1-216ENST00000493758 KCNA1Q09470 495 aa8.23□□□□□ -1.09
ITGB1-216ENST00000493758 PDE12Q6L8Q7 609 aaKnown RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms