RNA–Protein interactions for RNA: ENST00000493039.5

CSTF1-206, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 2,234 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-206ENST00000493039 GPTP24298 496 aa11.86□□□□□ -0.51
CSTF1-206ENST00000493039 MVPQ14764 893 aaKnown RBP11.86□□□□□ -0.51
CSTF1-206ENST00000493039 FLAD1Q8NFF5 587 aa11.86□□□□□ -0.51
CSTF1-206ENST00000493039 CRBNQ96SW2 442 aa11.86□□□□□ -0.51
CSTF1-206ENST00000493039 SRCIN1Q9C0H9 1055 aa11.86□□□□□ -0.51
CSTF1-206ENST00000493039 USP44Q9H0E7 712 aa11.86□□□□□ -0.51
CSTF1-206ENST00000493039 CCT4P50991 539 aaKnown RBP11.85□□□□□ -0.51
CSTF1-206ENST00000493039 NLRP10Q86W26 655 aa11.85□□□□□ -0.51
CSTF1-206ENST00000493039 ARFGEF2Q9Y6D5 1785 aa11.85□□□□□ -0.51
CSTF1-206ENST00000493039 TM4SF1P30408 202 aa11.84□□□□□ -0.51
CSTF1-206ENST00000493039 GCKRQ14397 625 aa11.84□□□□□ -0.51
CSTF1-206ENST00000493039 R3HDM1Q15032 1099 aaKnown RBP11.84□□□□□ -0.51
CSTF1-206ENST00000493039 ITPRIPQ8IWB1 547 aa11.84□□□□□ -0.51
CSTF1-206ENST00000493039 EXOC6Q8TAG9 804 aa11.84□□□□□ -0.51
CSTF1-206ENST00000493039 PXDNLA1KZ92 1463 aa11.84□□□□□ -0.51
CSTF1-206ENST00000493039 ALDH1L1O75891 902 aa11.84□□□□□ -0.51
CSTF1-206ENST00000493039 NBPF7P0C2Y1 421 aaPredicted RBP11.84□□□□□ -0.51
CSTF1-206ENST00000493039 MS4A1P11836 297 aa11.84□□□□□ -0.51
CSTF1-206ENST00000493039 NFIXQ14938 502 aa11.84□□□□□ -0.51
CSTF1-206ENST00000493039 SYNE4Q8N205 404 aa11.84□□□□□ -0.51
CSTF1-206ENST00000493039 JARID2Q92833 1246 aaPredicted RBP11.84□□□□□ -0.51
CSTF1-206ENST00000493039 MEIS3Q99687 375 aa11.84□□□□□ -0.51
CSTF1-206ENST00000493039 NIP7Q9Y221 180 aaKnown RBP eCLIP11.84□□□□□ -0.51
CSTF1-206ENST00000493039 MSH5O43196 834 aa11.83□□□□□ -0.52
CSTF1-206ENST00000493039 CASP7P55210 303 aa11.83□□□□□ -0.52
CSTF1-206ENST00000493039 NEXNQ0ZGT2 675 aa11.83□□□□□ -0.52
CSTF1-206ENST00000493039 SUSD4Q5VX71 490 aa11.83□□□□□ -0.52
CSTF1-206ENST00000493039 BICDL1Q6ZP65 573 aa11.83□□□□□ -0.52
CSTF1-206ENST00000493039 CCDC191Q8NCU4 936 aa11.83□□□□□ -0.52
CSTF1-206ENST00000493039 CCDC136Q96JN2 1154 aa11.83□□□□□ -0.52
CSTF1-206ENST00000493039 NUP98P52948 1817 aa11.83□□□□□ -0.52
CSTF1-206ENST00000493039 BCORQ6W2J9 1755 aa11.83□□□□□ -0.52
CSTF1-206ENST00000493039 SCN7AQ01118 1682 aa11.83□□□□□ -0.52
CSTF1-206ENST00000493039 HSP90AB3PQ58FF7 597 aa11.83□□□□□ -0.52
CSTF1-206ENST00000493039 ZBTB40Q9NUA8 1239 aa11.83□□□□□ -0.52
CSTF1-206ENST00000493039 IBTKQ9P2D0 1353 aaPredicted RBP11.82□□□□□ -0.52
CSTF1-206ENST00000493039 UTYO14607 1347 aa11.82□□□□□ -0.52
CSTF1-206ENST00000493039 PSDA5PKW4 1024 aaPredicted RBP11.82□□□□□ -0.52
CSTF1-206ENST00000493039 H7C1W4 665 aa11.82□□□□□ -0.52
CSTF1-206ENST00000493039 SOCS7O14512 581 aa11.82□□□□□ -0.52
CSTF1-206ENST00000493039 DDR1Q08345 913 aa11.82□□□□□ -0.52
CSTF1-206ENST00000493039 MSL1Q68DK7 614 aa11.82□□□□□ -0.52
CSTF1-206ENST00000493039 KAZALD1Q96I82 304 aa11.82□□□□□ -0.52
CSTF1-206ENST00000493039 ZNF652Q9Y2D9 606 aa11.82□□□□□ -0.52
CSTF1-206ENST00000493039 GOLGB1Q14789 3259 aaKnown RBP11.82□□□□□ -0.52
CSTF1-206ENST00000493039 FAM89AQ96GI7 184 aa11.82□□□□□ -0.52
CSTF1-206ENST00000493039 CWC25Q9NXE8 425 aaPredicted RBP11.82□□□□□ -0.52
CSTF1-206ENST00000493039 GRM8O00222 908 aa11.81□□□□□ -0.52
CSTF1-206ENST00000493039 NTSR2O95665 410 aa11.81□□□□□ -0.52
CSTF1-206ENST00000493039 RTL5Q5HYW3 569 aaPredicted RBP11.81□□□□□ -0.52
CSTF1-206ENST00000493039 NLGN1Q8N2Q7 840 aa11.81□□□□□ -0.52
CSTF1-206ENST00000493039 DDX19BQ9UMR2 479 aa11.81□□□□□ -0.52
CSTF1-206ENST00000493039 QSER1Q2KHR3 1735 aa11.81□□□□□ -0.52
CSTF1-206ENST00000493039 FAM177BA6PVY3 158 aa11.8□□□□□ -0.52
CSTF1-206ENST00000493039 SETDB2Q96T68 719 aa11.8□□□□□ -0.52
CSTF1-206ENST00000493039 POLRMTO00411 1230 aaKnown RBP11.8□□□□□ -0.52
CSTF1-206ENST00000493039 PARP10Q53GL7 1025 aa11.8□□□□□ -0.52
CSTF1-206ENST00000493039 UBE3BQ7Z3V4 1068 aa11.8□□□□□ -0.52
CSTF1-206ENST00000493039 PCCAP05165 728 aaPredicted RBP11.79□□□□□ -0.52
CSTF1-206ENST00000493039 EPHA10Q5JZY3 1008 aa11.79□□□□□ -0.52
CSTF1-206ENST00000493039 NUTM1Q86Y26 1132 aa11.79□□□□□ -0.52
CSTF1-206ENST00000493039 ZBTB38Q8NAP3 1195 aaPredicted RBP11.79□□□□□ -0.52
CSTF1-206ENST00000493039 SLC16A10Q8TF71 515 aa11.79□□□□□ -0.52
CSTF1-206ENST00000493039 C9orf78Q9NZ63 289 aaPredicted RBP11.79□□□□□ -0.52
CSTF1-206ENST00000493039 TRMT112Q9UI30 125 aaKnown RBP11.79□□□□□ -0.52
CSTF1-206ENST00000493039 A0A0U1RQG5 324 aaPredicted RBP11.79□□□□□ -0.52
CSTF1-206ENST00000493039 ZBTB7AO95365 584 aa11.79□□□□□ -0.52
CSTF1-206ENST00000493039 MMP10P09238 476 aa11.79□□□□□ -0.52
CSTF1-206ENST00000493039 CCDC24Q8N4L8 307 aa11.79□□□□□ -0.52
CSTF1-206ENST00000493039 SUCLG2Q96I99 432 aa11.79□□□□□ -0.52
CSTF1-206ENST00000493039 UTP14AQ9BVJ6 771 aaKnown RBP11.79□□□□□ -0.52
CSTF1-206ENST00000493039 C1orf115Q9H7X2 142 aa11.79□□□□□ -0.52
CSTF1-206ENST00000493039 N4BP2Q86UW6 1770 aaPredicted RBP11.78□□□□□ -0.52
CSTF1-206ENST00000493039 HSP90B1P14625 803 aaKnown RBP11.78□□□□□ -0.52
CSTF1-206ENST00000493039 PCDHB15Q9Y5E8 787 aa11.78□□□□□ -0.52
CSTF1-206ENST00000493039 ANKRD36CQ5JPF3 1778 aa11.78□□□□□ -0.52
CSTF1-206ENST00000493039 CASZ1Q86V15 1759 aa11.78□□□□□ -0.52
CSTF1-206ENST00000493039 SERPINB2P05120 415 aa11.78□□□□□ -0.52
CSTF1-206ENST00000493039 ERFEQ4G0M1 354 aa11.78□□□□□ -0.52
CSTF1-206ENST00000493039 CARMIL3Q8ND23 1372 aa11.77□□□□□ -0.52
CSTF1-206ENST00000493039 GNAI3P08754 354 aa11.77□□□□□ -0.53
CSTF1-206ENST00000493039 UBTFL1P0CB47 393 aaPredicted RBP11.77□□□□□ -0.53
CSTF1-206ENST00000493039 HCLS1P14317 486 aaPredicted RBP11.77□□□□□ -0.53
CSTF1-206ENST00000493039 FOXO4P98177 505 aa11.77□□□□□ -0.53
CSTF1-206ENST00000493039 PRR5LQ6MZQ0 368 aa11.77□□□□□ -0.53
CSTF1-206ENST00000493039 C3orf67Q6ZVT6 689 aa11.77□□□□□ -0.53
CSTF1-206ENST00000493039 PPP1R42Q7Z4L9 355 aa11.77□□□□□ -0.53
CSTF1-206ENST00000493039 SIRT2Q8IXJ6 389 aa11.77□□□□□ -0.53
CSTF1-206ENST00000493039 SGIP1Q9BQI5 828 aa11.77□□□□□ -0.53
CSTF1-206ENST00000493039 LRRFIP2Q9Y608 721 aaKnown RBP11.77□□□□□ -0.53
CSTF1-206ENST00000493039 SH3TC1Q8TE82 1336 aa11.77□□□□□ -0.53
CSTF1-206ENST00000493039 SLC10A5Q5PT55 438 aa11.76□□□□□ -0.53
CSTF1-206ENST00000493039 NBPF5PQ86XG9 351 aaPredicted RBP11.76□□□□□ -0.53
CSTF1-206ENST00000493039 ANKRD44Q8N8A2 993 aa11.76□□□□□ -0.53
CSTF1-206ENST00000493039 ATF5Q9Y2D1 282 aaPredicted RBP11.76□□□□□ -0.53
CSTF1-206ENST00000493039 ABCC12Q96J65 1359 aa11.76□□□□□ -0.53
CSTF1-206ENST00000493039 COL24A1Q17RW2 1714 aa11.76□□□□□ -0.53
CSTF1-206ENST00000493039 CDHR2Q9BYE9 1310 aa11.76□□□□□ -0.53
CSTF1-206ENST00000493039 IRS4O14654 1257 aaPredicted RBP11.76□□□□□ -0.53
CSTF1-206ENST00000493039 TPTE2Q6XPS3 522 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms