RNA–Protein interactions for RNA: ENST00000492606.1

UBR4-215, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-215ENST00000492606 TNFRSF10AO00220 468 aa6.37□□□□□ -1.39
UBR4-215ENST00000492606 KRT37O76014 449 aa6.37□□□□□ -1.39
UBR4-215ENST00000492606 HOXB1P14653 301 aaPredicted RBP6.37□□□□□ -1.39
UBR4-215ENST00000492606 EN2P19622 333 aaPredicted RBP6.37□□□□□ -1.39
UBR4-215ENST00000492606 EAPPQ56P03 285 aaPredicted RBP6.37□□□□□ -1.39
UBR4-215ENST00000492606 MYSM1Q5VVJ2 828 aa6.37□□□□□ -1.39
UBR4-215ENST00000492606 DACH1Q9UI36 760 aa6.37□□□□□ -1.39
UBR4-215ENST00000492606 NCOR1O75376 2440 aa6.37□□□□□ -1.39
UBR4-215ENST00000492606 DICER1Q9UPY3 1922 aaKnown RBP6.37□□□□□ -1.39
UBR4-215ENST00000492606 TRPM7Q96QT4 1865 aa6.36□□□□□ -1.39
UBR4-215ENST00000492606 SCN4AP35499 1836 aa6.36□□□□□ -1.39
UBR4-215ENST00000492606 ZFHX4Q86UP3 3567 aa6.36□□□□□ -1.39
UBR4-215ENST00000492606 RCCD1A6NED2 376 aa6.36□□□□□ -1.39
UBR4-215ENST00000492606 PCMTD1Q96MG8 357 aaPredicted RBP6.36□□□□□ -1.39
UBR4-215ENST00000492606 NSD2O96028 1365 aa6.35□□□□□ -1.39
UBR4-215ENST00000492606 NFKBIEO00221 500 aa6.35□□□□□ -1.39
UBR4-215ENST00000492606 TRPA1O75762 1119 aa6.35□□□□□ -1.39
UBR4-215ENST00000492606 POTEEQ6S8J3 1075 aa6.35□□□□□ -1.39
UBR4-215ENST00000492606 ANKRD13DQ6ZTN6 518 aa6.35□□□□□ -1.39
UBR4-215ENST00000492606 RSPH6AQ9H0K4 717 aa6.35□□□□□ -1.39
UBR4-215ENST00000492606 KMT2BQ9UMN6 2715 aaPredicted RBP6.35□□□□□ -1.39
UBR4-215ENST00000492606 EPG5Q9HCE0 2579 aa6.34□□□□□ -1.39
UBR4-215ENST00000492606 WDR17Q8IZU2 1322 aa6.34□□□□□ -1.39
UBR4-215ENST00000492606 ZDBF2Q9HCK1 2354 aa6.34□□□□□ -1.39
UBR4-215ENST00000492606 ZBTB7CA1YPR0 619 aa6.34□□□□□ -1.39
UBR4-215ENST00000492606 PPP1R3GB7ZBB8 358 aa6.34□□□□□ -1.39
UBR4-215ENST00000492606 RIMBP2O15034 1052 aa6.34□□□□□ -1.39
UBR4-215ENST00000492606 CD46P15529 392 aa6.34□□□□□ -1.39
UBR4-215ENST00000492606 CHRNA5P30532 468 aa6.34□□□□□ -1.39
UBR4-215ENST00000492606 FLIIQ13045 1269 aa6.34□□□□□ -1.39
UBR4-215ENST00000492606 PKN2Q16513 984 aaKnown RBP6.34□□□□□ -1.39
UBR4-215ENST00000492606 PPP4R3BQ5MIZ7 849 aa6.34□□□□□ -1.39
UBR4-215ENST00000492606 MAMSTRQ6ZN01 415 aa6.34□□□□□ -1.39
UBR4-215ENST00000492606 SCUBE2Q9NQ36 999 aa6.34□□□□□ -1.39
UBR4-215ENST00000492606 POLR3EQ9NVU0 708 aa6.34□□□□□ -1.39
UBR4-215ENST00000492606 RNF186Q9NXI6 227 aa6.34□□□□□ -1.39
UBR4-215ENST00000492606 AXIN2Q9Y2T1 843 aa6.34□□□□□ -1.39
UBR4-215ENST00000492606 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.33□□□□□ -1.4
UBR4-215ENST00000492606 MCM6Q14566 821 aa6.33□□□□□ -1.4
UBR4-215ENST00000492606 KCTD2Q14681 263 aa6.33□□□□□ -1.4
UBR4-215ENST00000492606 FBXO46Q6PJ61 603 aaPredicted RBP6.33□□□□□ -1.4
UBR4-215ENST00000492606 NUDT18Q6ZVK8 323 aa6.33□□□□□ -1.4
UBR4-215ENST00000492606 SAPCD2Q86UD0 394 aa6.33□□□□□ -1.4
UBR4-215ENST00000492606 ZNF710Q8N1W2 664 aa6.33□□□□□ -1.4
UBR4-215ENST00000492606 SPIRE2Q8WWL2 714 aa6.33□□□□□ -1.4
UBR4-215ENST00000492606 TBC1D2Q9BYX2 928 aa6.33□□□□□ -1.4
UBR4-215ENST00000492606 SAGE1Q9NXZ1 904 aa6.33□□□□□ -1.4
UBR4-215ENST00000492606 LIMD1Q9UGP4 676 aa6.33□□□□□ -1.4
UBR4-215ENST00000492606 PPLO60437 1756 aa6.33□□□□□ -1.4
UBR4-215ENST00000492606 RGPD5Q99666 1765 aa6.32□□□□□ -1.4
UBR4-215ENST00000492606 ANKRD11Q6UB99 2663 aaPredicted RBP6.32□□□□□ -1.4
UBR4-215ENST00000492606 TRIM6-TRIM34B2RNG4 842 aa6.32□□□□□ -1.4
UBR4-215ENST00000492606 TRAF5O00463 557 aa6.32□□□□□ -1.4
UBR4-215ENST00000492606 MRE11P49959 708 aa6.32□□□□□ -1.4
UBR4-215ENST00000492606 PROX2Q3B8N5 592 aa6.32□□□□□ -1.4
UBR4-215ENST00000492606 AKAP4Q5JQC9 854 aa6.32□□□□□ -1.4
UBR4-215ENST00000492606 TATDN2Q93075 761 aa6.32□□□□□ -1.4
UBR4-215ENST00000492606 CLUAP1Q96AJ1 413 aa6.32□□□□□ -1.4
UBR4-215ENST00000492606 CARD10Q9BWT7 1032 aa6.32□□□□□ -1.4
UBR4-215ENST00000492606 C4BP0C0L5 1744 aa6.32□□□□□ -1.4
UBR4-215ENST00000492606 AKAP11Q9UKA4 1901 aa6.32□□□□□ -1.4
UBR4-215ENST00000492606 PPIP5K1Q6PFW1 1433 aa6.32□□□□□ -1.4
UBR4-215ENST00000492606 SPTBN4Q9H254 2564 aa6.31□□□□□ -1.4
UBR4-215ENST00000492606 C4AP0C0L4 1744 aa6.31□□□□□ -1.4
UBR4-215ENST00000492606 IQCA1LA6NCM1 817 aa6.31□□□□□ -1.4
UBR4-215ENST00000492606 A6NJR5 290 aa6.31□□□□□ -1.4
UBR4-215ENST00000492606 PTPREP23469 700 aa6.31□□□□□ -1.4
UBR4-215ENST00000492606 SYNE4Q8N205 404 aa6.31□□□□□ -1.4
UBR4-215ENST00000492606 SYMPKQ92797 1274 aaKnown RBP6.31□□□□□ -1.4
UBR4-215ENST00000492606 TMEM134Q9H6X4 195 aa6.31□□□□□ -1.4
UBR4-215ENST00000492606 CCDC87Q9NVE4 849 aa6.31□□□□□ -1.4
UBR4-215ENST00000492606 ANKARQ7Z5J8 1434 aa6.31□□□□□ -1.4
UBR4-215ENST00000492606 CHD6Q8TD26 2715 aa6.31□□□□□ -1.4
UBR4-215ENST00000492606 ABCC11Q96J66 1382 aa6.31□□□□□ -1.4
UBR4-215ENST00000492606 SMAPO00193 183 aa6.3□□□□□ -1.4
UBR4-215ENST00000492606 GCP02774 474 aa6.3□□□□□ -1.4
UBR4-215ENST00000492606 CLK2P49760 499 aaKnown RBP6.3□□□□□ -1.4
UBR4-215ENST00000492606 NBPF1Q3BBV0 1214 aa6.3□□□□□ -1.4
UBR4-215ENST00000492606 ERFEQ4G0M1 354 aa6.3□□□□□ -1.4
UBR4-215ENST00000492606 PPP2R2DQ66LE6 453 aa6.3□□□□□ -1.4
UBR4-215ENST00000492606 NGDNQ8NEJ9 315 aaKnown RBP6.3□□□□□ -1.4
UBR4-215ENST00000492606 SYTL4Q96C24 671 aaPredicted RBP6.3□□□□□ -1.4
UBR4-215ENST00000492606 POM121Q96HA1 1249 aa6.3□□□□□ -1.4
UBR4-215ENST00000492606 RPTORQ8N122 1335 aa6.29□□□□□ -1.4
UBR4-215ENST00000492606 UBTFP17480 764 aaKnown RBP6.29□□□□□ -1.4
UBR4-215ENST00000492606 EPHX2P34913 555 aa6.29□□□□□ -1.4
UBR4-215ENST00000492606 NOGQ13253 232 aa6.29□□□□□ -1.4
UBR4-215ENST00000492606 TUSC1Q2TAM9 212 aa6.29□□□□□ -1.4
UBR4-215ENST00000492606 TMEM132EQ6IEE7 984 aa6.29□□□□□ -1.4
UBR4-215ENST00000492606 HOMEZQ8IX15 550 aa6.29□□□□□ -1.4
UBR4-215ENST00000492606 DOT1LQ8TEK3 1739 aa6.29□□□□□ -1.4
UBR4-215ENST00000492606 GUCD1Q96NT3 240 aa6.29□□□□□ -1.4
UBR4-215ENST00000492606 ZBED2Q9BTP6 218 aa6.29□□□□□ -1.4
UBR4-215ENST00000492606 PNMA3Q9UL41 463 aa6.29□□□□□ -1.4
UBR4-215ENST00000492606 NSD3Q9BZ95 1437 aa6.28□□□□□ -1.4
UBR4-215ENST00000492606 A0A1W2PPC1 479 aa6.28□□□□□ -1.4
UBR4-215ENST00000492606 SPTLC1O15269 473 aa6.28□□□□□ -1.4
UBR4-215ENST00000492606 DNAJB2P25686 324 aa6.28□□□□□ -1.4
UBR4-215ENST00000492606 RFC5P40937 340 aa6.28□□□□□ -1.4
UBR4-215ENST00000492606 RIC3Q7Z5B4 369 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms