RNA–Protein interactions for RNA: ENST00000492511.1

PDLIM1-204, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 453 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-204ENST00000492511 CDCA7LQ96GN5 454 aa9.27□□□□□ -0.93
PDLIM1-204ENST00000492511 MASTLQ96GX5 879 aa9.27□□□□□ -0.93
PDLIM1-204ENST00000492511 UTP14AQ9BVJ6 771 aaKnown RBP9.27□□□□□ -0.93
PDLIM1-204ENST00000492511 BRCA1P38398 1863 aaKnown RBP9.27□□□□□ -0.93
PDLIM1-204ENST00000492511 SLC4A2P04920 1241 aa9.26□□□□□ -0.93
PDLIM1-204ENST00000492511 NPR1P16066 1061 aa9.26□□□□□ -0.93
PDLIM1-204ENST00000492511 HSPA6P17066 643 aa9.26□□□□□ -0.93
PDLIM1-204ENST00000492511 GTF2E1P29083 439 aaPredicted RBP9.26□□□□□ -0.93
PDLIM1-204ENST00000492511 SLFN5Q08AF3 891 aa9.26□□□□□ -0.93
PDLIM1-204ENST00000492511 TRIM28Q13263 835 aaKnown RBP9.26□□□□□ -0.93
PDLIM1-204ENST00000492511 PPP1R42Q7Z4L9 355 aa9.26□□□□□ -0.93
PDLIM1-204ENST00000492511 RIC3Q7Z5B4 369 aa9.26□□□□□ -0.93
PDLIM1-204ENST00000492511 TRMT2AQ8IZ69 625 aaKnown RBP9.26□□□□□ -0.93
PDLIM1-204ENST00000492511 MYH16Q9H6N6 1097 aa9.26□□□□□ -0.93
PDLIM1-204ENST00000492511 NUP98P52948 1817 aa9.26□□□□□ -0.93
PDLIM1-204ENST00000492511 ADCY9O60503 1353 aa9.25□□□□□ -0.93
PDLIM1-204ENST00000492511 RIC1Q4ADV7 1423 aa9.25□□□□□ -0.93
PDLIM1-204ENST00000492511 NFKBIEO00221 500 aa9.25□□□□□ -0.93
PDLIM1-204ENST00000492511 C21orf2O43822 256 aa9.25□□□□□ -0.93
PDLIM1-204ENST00000492511 HCLS1P14317 486 aaPredicted RBP9.25□□□□□ -0.93
PDLIM1-204ENST00000492511 HOXA10P31260 410 aaPredicted RBP9.25□□□□□ -0.93
PDLIM1-204ENST00000492511 RASSF7Q02833 373 aa9.25□□□□□ -0.93
PDLIM1-204ENST00000492511 PRPF40BQ6NWY9 871 aaKnown RBP9.25□□□□□ -0.93
PDLIM1-204ENST00000492511 OLFM4Q6UX06 510 aa9.25□□□□□ -0.93
PDLIM1-204ENST00000492511 KSR2Q6VAB6 950 aa9.25□□□□□ -0.93
PDLIM1-204ENST00000492511 SLC51AQ86UW1 340 aa9.25□□□□□ -0.93
PDLIM1-204ENST00000492511 CNKSR1Q969H4 720 aa9.25□□□□□ -0.93
PDLIM1-204ENST00000492511 MYD88Q99836 296 aa9.25□□□□□ -0.93
PDLIM1-204ENST00000492511 METTL22Q9BUU2 404 aaPredicted RBP9.25□□□□□ -0.93
PDLIM1-204ENST00000492511 CHMP4AQ9BY43 222 aa9.25□□□□□ -0.93
PDLIM1-204ENST00000492511 ZNF219Q9P2Y4 722 aaPredicted RBP9.25□□□□□ -0.93
PDLIM1-204ENST00000492511 TRMT112Q9UI30 125 aaKnown RBP9.25□□□□□ -0.93
PDLIM1-204ENST00000492511 MAP3K2Q9Y2U5 619 aa9.25□□□□□ -0.93
PDLIM1-204ENST00000492511 COL11A2P13942 1736 aaPredicted RBP9.25□□□□□ -0.93
PDLIM1-204ENST00000492511 TNRC6CQ9HCJ0 1690 aaKnown RBP9.24□□□□□ -0.93
PDLIM1-204ENST00000492511 PI4KAP2A4QPH2 592 aa9.24□□□□□ -0.93
PDLIM1-204ENST00000492511 E9PSI1 815 aa9.24□□□□□ -0.93
PDLIM1-204ENST00000492511 IGKV5-2P06315 115 aa9.24□□□□□ -0.93
PDLIM1-204ENST00000492511 C9orf131Q5VYM1 1079 aa9.24□□□□□ -0.93
PDLIM1-204ENST00000492511 PI4KAP1Q8N8J0 262 aa9.24□□□□□ -0.93
PDLIM1-204ENST00000492511 FAM89AQ96GI7 184 aa9.24□□□□□ -0.93
PDLIM1-204ENST00000492511 STK31Q9BXU1 1019 aa9.24□□□□□ -0.93
PDLIM1-204ENST00000492511 RNF123Q5XPI4 1314 aa9.24□□□□□ -0.93
PDLIM1-204ENST00000492511 DLEC1Q9Y238 1755 aa9.23□□□□□ -0.93
PDLIM1-204ENST00000492511 DDX58O95786 925 aaKnown RBP9.23□□□□□ -0.93
PDLIM1-204ENST00000492511 ALDH1B1P30837 517 aa9.23□□□□□ -0.93
PDLIM1-204ENST00000492511 FLIIQ13045 1269 aa9.23□□□□□ -0.93
PDLIM1-204ENST00000492511 ZNF526Q8TF50 670 aaPredicted RBP9.23□□□□□ -0.93
PDLIM1-204ENST00000492511 JARID2Q92833 1246 aaPredicted RBP9.23□□□□□ -0.93
PDLIM1-204ENST00000492511 NLRP3Q96P20 1036 aa9.23□□□□□ -0.93
PDLIM1-204ENST00000492511 SH3TC1Q8TE82 1336 aa9.23□□□□□ -0.93
PDLIM1-204ENST00000492511 RTL5Q5HYW3 569 aaPredicted RBP9.22□□□□□ -0.93
PDLIM1-204ENST00000492511 ZBTB38Q8NAP3 1195 aaPredicted RBP9.22□□□□□ -0.93
PDLIM1-204ENST00000492511 CCDC191Q8NCU4 936 aa9.22□□□□□ -0.93
PDLIM1-204ENST00000492511 CRAMP1Q96RY5 1269 aa9.22□□□□□ -0.93
PDLIM1-204ENST00000492511 SNED1Q8TER0 1413 aa9.22□□□□□ -0.93
PDLIM1-204ENST00000492511 SLX4Q8IY92 1834 aa9.21□□□□□ -0.93
PDLIM1-204ENST00000492511 ARFGEF1Q9Y6D6 1849 aa9.21□□□□□ -0.93
PDLIM1-204ENST00000492511 NEURL1BA8MQ27 555 aa9.21□□□□□ -0.94
PDLIM1-204ENST00000492511 IRS4O14654 1257 aaPredicted RBP9.21□□□□□ -0.94
PDLIM1-204ENST00000492511 PCCAP05165 728 aaPredicted RBP9.21□□□□□ -0.94
PDLIM1-204ENST00000492511 LMNB1P20700 586 aa9.21□□□□□ -0.94
PDLIM1-204ENST00000492511 APLP1P51693 650 aa9.21□□□□□ -0.94
PDLIM1-204ENST00000492511 SF3B3Q15393 1217 aaKnown RBP9.21□□□□□ -0.94
PDLIM1-204ENST00000492511 CWF19L2Q2TBE0 894 aaKnown RBP9.21□□□□□ -0.94
PDLIM1-204ENST00000492511 MRPL50Q8N5N7 158 aaKnown RBP9.21□□□□□ -0.94
PDLIM1-204ENST00000492511 RPGRQ92834 1020 aaKnown RBP9.21□□□□□ -0.94
PDLIM1-204ENST00000492511 RBM17Q96I25 401 aaKnown RBP9.21□□□□□ -0.94
PDLIM1-204ENST00000492511 CWC25Q9NXE8 425 aaPredicted RBP9.21□□□□□ -0.94
PDLIM1-204ENST00000492511 RNF181Q9P0P0 153 aa9.21□□□□□ -0.94
PDLIM1-204ENST00000492511 ABCC4O15439 1325 aa9.21□□□□□ -0.94
PDLIM1-204ENST00000492511 ARFGEF2Q9Y6D5 1785 aa9.2□□□□□ -0.94
PDLIM1-204ENST00000492511 F6X3S4 739 aa9.2□□□□□ -0.94
PDLIM1-204ENST00000492511 CASP7P55210 303 aa9.2□□□□□ -0.94
PDLIM1-204ENST00000492511 FKBP5Q13451 457 aaPredicted RBP9.2□□□□□ -0.94
PDLIM1-204ENST00000492511 CCDC93Q567U6 631 aa9.2□□□□□ -0.94
PDLIM1-204ENST00000492511 DNAAF4Q8WXU2 420 aa9.2□□□□□ -0.94
PDLIM1-204ENST00000492511 LTBP3Q9NS15 1303 aa9.2□□□□□ -0.94
PDLIM1-204ENST00000492511 ANKRD36CQ5JPF3 1778 aa9.19□□□□□ -0.94
PDLIM1-204ENST00000492511 H7C1W4 665 aa9.19□□□□□ -0.94
PDLIM1-204ENST00000492511 PPEF1O14829 653 aaPredicted RBP9.19□□□□□ -0.94
PDLIM1-204ENST00000492511 FKBP4Q02790 459 aaKnown RBP eCLIP9.19□□□□□ -0.94
PDLIM1-204ENST00000492511 GCKRQ14397 625 aa9.19□□□□□ -0.94
PDLIM1-204ENST00000492511 BEND3Q5T5X7 828 aa9.19□□□□□ -0.94
PDLIM1-204ENST00000492511 SOGA3Q5TF21 947 aa9.19□□□□□ -0.94
PDLIM1-204ENST00000492511 SSH1Q8WYL5 1049 aa9.19□□□□□ -0.94
PDLIM1-204ENST00000492511 TAOK3Q9H2K8 898 aa9.19□□□□□ -0.94
PDLIM1-204ENST00000492511 ATP6V0A2Q9Y487 856 aa9.19□□□□□ -0.94
PDLIM1-204ENST00000492511 BBOX1O75936 387 aa9.18□□□□□ -0.94
PDLIM1-204ENST00000492511 COL4A1P02462 1669 aa9.18□□□□□ -0.94
PDLIM1-204ENST00000492511 GRAPQ13588 217 aa9.18□□□□□ -0.94
PDLIM1-204ENST00000492511 DDX46Q7L014 1031 aaKnown RBP9.18□□□□□ -0.94
PDLIM1-204ENST00000492511 C16orf71Q8IYS4 520 aaPredicted RBP9.18□□□□□ -0.94
PDLIM1-204ENST00000492511 RTKN2Q8IZC4 609 aa9.18□□□□□ -0.94
PDLIM1-204ENST00000492511 LINS1Q8NG48 757 aa9.18□□□□□ -0.94
PDLIM1-204ENST00000492511 GRAPLQ8TC17 118 aaPredicted RBP9.18□□□□□ -0.94
PDLIM1-204ENST00000492511 CELF1Q92879 486 aaKnown RBP9.18□□□□□ -0.94
PDLIM1-204ENST00000492511 CDHR2Q9BYE9 1310 aa9.18□□□□□ -0.94
PDLIM1-204ENST00000492511 SEC31BQ9NQW1 1179 aa9.18□□□□□ -0.94
PDLIM1-204ENST00000492511 ZNF277Q9NRM2 450 aaPredicted RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms