RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 ANKRD36CQ5JPF3 1778 aa16.52■□□□□ 0.24
SEC61A1-206ENST00000491668 GLTPD2A6NH11 291 aa16.52■□□□□ 0.24
SEC61A1-206ENST00000491668 POTECB2RU33 542 aa16.52■□□□□ 0.24
SEC61A1-206ENST00000491668 HOXA10P31260 410 aaPredicted RBP16.52■□□□□ 0.24
SEC61A1-206ENST00000491668 MIER1Q8N108 512 aa16.52■□□□□ 0.24
SEC61A1-206ENST00000491668 IFT57Q9NWB7 429 aa16.52■□□□□ 0.24
SEC61A1-206ENST00000491668 PARP10Q53GL7 1025 aa16.51■□□□□ 0.23
SEC61A1-206ENST00000491668 SLC10A5Q5PT55 438 aa16.51■□□□□ 0.23
SEC61A1-206ENST00000491668 NLRP10Q86W26 655 aa16.51■□□□□ 0.23
SEC61A1-206ENST00000491668 SYNE4Q8N205 404 aa16.51■□□□□ 0.23
SEC61A1-206ENST00000491668 TCIRG1Q13488 830 aa16.5■□□□□ 0.23
SEC61A1-206ENST00000491668 CCDC93Q567U6 631 aa16.5■□□□□ 0.23
SEC61A1-206ENST00000491668 SOGA3Q5TF21 947 aa16.5■□□□□ 0.23
SEC61A1-206ENST00000491668 C8orf58Q8NAV2 365 aa16.5■□□□□ 0.23
SEC61A1-206ENST00000491668 UTP14AQ9BVJ6 771 aaKnown RBP16.5■□□□□ 0.23
SEC61A1-206ENST00000491668 ALDH1B1P30837 517 aa16.49■□□□□ 0.23
SEC61A1-206ENST00000491668 GNAI1P63096 354 aa16.49■□□□□ 0.23
SEC61A1-206ENST00000491668 PPP1R42Q7Z4L9 355 aa16.49■□□□□ 0.23
SEC61A1-206ENST00000491668 RBM46Q8TBY0 533 aaKnown RBP16.49■□□□□ 0.23
SEC61A1-206ENST00000491668 ZNF428Q96B54 188 aa16.49■□□□□ 0.23
SEC61A1-206ENST00000491668 DBF4Q9UBU7 674 aaPredicted RBP16.49■□□□□ 0.23
SEC61A1-206ENST00000491668 ELL2O00472 640 aaPredicted RBP16.48■□□□□ 0.23
SEC61A1-206ENST00000491668 FKBP4Q02790 459 aaKnown RBP eCLIP16.48■□□□□ 0.23
SEC61A1-206ENST00000491668 PLBD2Q8NHP8 589 aa16.48■□□□□ 0.23
SEC61A1-206ENST00000491668 ZNF277Q9NRM2 450 aaPredicted RBP16.48■□□□□ 0.23
SEC61A1-206ENST00000491668 LAMB2P55268 1798 aa16.48■□□□□ 0.23
SEC61A1-206ENST00000491668 WDR90Q96KV7 1748 aa16.48■□□□□ 0.23
SEC61A1-206ENST00000491668 COL4A5P29400 1685 aa16.47■□□□□ 0.23
SEC61A1-206ENST00000491668 CCER2I3L3R5 266 aa16.47■□□□□ 0.23
SEC61A1-206ENST00000491668 HSP90AB3PQ58FF7 597 aa16.47■□□□□ 0.23
SEC61A1-206ENST00000491668 ANKRD13DQ6ZTN6 518 aa16.47■□□□□ 0.23
SEC61A1-206ENST00000491668 TSPYL6Q8N831 410 aa16.47■□□□□ 0.23
SEC61A1-206ENST00000491668 RPGRQ92834 1020 aaKnown RBP16.47■□□□□ 0.23
SEC61A1-206ENST00000491668 CRAMP1Q96RY5 1269 aa16.47■□□□□ 0.23
SEC61A1-206ENST00000491668 ISCA1Q9BUE6 129 aa16.47■□□□□ 0.23
SEC61A1-206ENST00000491668 HCLS1P14317 486 aaPredicted RBP16.46■□□□□ 0.23
SEC61A1-206ENST00000491668 VEGFAP15692 232 aaPredicted RBP16.46■□□□□ 0.23
SEC61A1-206ENST00000491668 CALD1Q05682 793 aaKnown RBP16.46■□□□□ 0.23
SEC61A1-206ENST00000491668 CCDC27Q2M243 656 aa16.46■□□□□ 0.23
SEC61A1-206ENST00000491668 WWC1Q8IX03 1113 aa16.46■□□□□ 0.23
SEC61A1-206ENST00000491668 RTKN2Q8IZC4 609 aa16.46■□□□□ 0.23
SEC61A1-206ENST00000491668 TSR2Q969E8 191 aaKnown RBP16.46■□□□□ 0.23
SEC61A1-206ENST00000491668 PHAXQ9H814 394 aaKnown RBP16.46■□□□□ 0.23
SEC61A1-206ENST00000491668 HYPKQ9NX55 129 aa16.46■□□□□ 0.23
SEC61A1-206ENST00000491668 DDNO94850 711 aaPredicted RBP16.45■□□□□ 0.22
SEC61A1-206ENST00000491668 NLRP3Q96P20 1036 aa16.45■□□□□ 0.22
SEC61A1-206ENST00000491668 RNF123Q5XPI4 1314 aa16.45■□□□□ 0.22
SEC61A1-206ENST00000491668 ATP5J2-PTCD1G3V325 749 aa16.44■□□□□ 0.22
SEC61A1-206ENST00000491668 C16orf71Q8IYS4 520 aaPredicted RBP16.44■□□□□ 0.22
SEC61A1-206ENST00000491668 RBM17Q96I25 401 aaKnown RBP16.44■□□□□ 0.22
SEC61A1-206ENST00000491668 TRMT112Q9UI30 125 aaKnown RBP16.44■□□□□ 0.22
SEC61A1-206ENST00000491668 DDX60Q8IY21 1712 aaKnown RBP16.44■□□□□ 0.22
SEC61A1-206ENST00000491668 ABCC4O15439 1325 aa16.44■□□□□ 0.22
SEC61A1-206ENST00000491668 SH3TC1Q8TE82 1336 aa16.44■□□□□ 0.22
SEC61A1-206ENST00000491668 ZNF541Q9H0D2 1346 aa16.44■□□□□ 0.22
SEC61A1-206ENST00000491668 TCERG1O14776 1098 aaKnown RBP16.43■□□□□ 0.22
SEC61A1-206ENST00000491668 FSTL1Q12841 308 aa16.43■□□□□ 0.22
SEC61A1-206ENST00000491668 DPY19L2Q6NUT2 758 aa16.43■□□□□ 0.22
SEC61A1-206ENST00000491668 PSMD1Q99460 953 aa16.43■□□□□ 0.22
SEC61A1-206ENST00000491668 TAF1P21675 1872 aa16.43■□□□□ 0.22
SEC61A1-206ENST00000491668 COL4A1P02462 1669 aa16.43■□□□□ 0.22
SEC61A1-206ENST00000491668 PPEF1O14829 653 aaPredicted RBP16.42■□□□□ 0.22
SEC61A1-206ENST00000491668 IARSP41252 1262 aaKnown RBP16.42■□□□□ 0.22
SEC61A1-206ENST00000491668 TRIM28Q13263 835 aaKnown RBP16.42■□□□□ 0.22
SEC61A1-206ENST00000491668 CC2D2BQ6DHV5 1058 aa16.42■□□□□ 0.22
SEC61A1-206ENST00000491668 FAM9BQ8IZU0 186 aa16.42■□□□□ 0.22
SEC61A1-206ENST00000491668 DNAJC5GQ8N7S2 189 aa16.42■□□□□ 0.22
SEC61A1-206ENST00000491668 FZD9O00144 591 aa16.41■□□□□ 0.22
SEC61A1-206ENST00000491668 APLP1P51693 650 aa16.41■□□□□ 0.22
SEC61A1-206ENST00000491668 HTRA3P83110 453 aa16.41■□□□□ 0.22
SEC61A1-206ENST00000491668 NCBP3Q53F19 620 aaKnown RBP16.41■□□□□ 0.22
SEC61A1-206ENST00000491668 FAM89AQ96GI7 184 aa16.41■□□□□ 0.22
SEC61A1-206ENST00000491668 ATP6V0A2Q9Y487 856 aa16.41■□□□□ 0.22
SEC61A1-206ENST00000491668 PCNTO95613 3336 aa16.4■□□□□ 0.22
SEC61A1-206ENST00000491668 POTEIP0CG38 1075 aa16.4■□□□□ 0.22
SEC61A1-206ENST00000491668 POTEJP0CG39 1038 aa16.4■□□□□ 0.22
SEC61A1-206ENST00000491668 SMC1BQ8NDV3 1235 aa16.4■□□□□ 0.22
SEC61A1-206ENST00000491668 L3MBTL3Q96JM7 780 aaPredicted RBP16.4■□□□□ 0.22
SEC61A1-206ENST00000491668 IL16Q14005 1332 aa16.39■□□□□ 0.21
SEC61A1-206ENST00000491668 RTL5Q5HYW3 569 aaPredicted RBP16.38■□□□□ 0.21
SEC61A1-206ENST00000491668 CCDC30Q5VVM6 783 aa16.38■□□□□ 0.21
SEC61A1-206ENST00000491668 RIC3Q7Z5B4 369 aa16.38■□□□□ 0.21
SEC61A1-206ENST00000491668 BBOX1O75936 387 aa16.37■□□□□ 0.21
SEC61A1-206ENST00000491668 GOLGA2Q08379 1002 aa16.37■□□□□ 0.21
SEC61A1-206ENST00000491668 SF3B3Q15393 1217 aaKnown RBP16.37■□□□□ 0.21
SEC61A1-206ENST00000491668 GRIPAP1Q4V328 841 aa16.37■□□□□ 0.21
SEC61A1-206ENST00000491668 G2E3Q7L622 706 aa16.37■□□□□ 0.21
SEC61A1-206ENST00000491668 SPINK5Q9NQ38 1064 aaPredicted RBP16.37■□□□□ 0.21
SEC61A1-206ENST00000491668 SALL2Q9Y467 1007 aaPredicted RBP16.37■□□□□ 0.21
SEC61A1-206ENST00000491668 FANCIQ9NVI1 1328 aa16.37■□□□□ 0.21
SEC61A1-206ENST00000491668 SCN4AP35499 1836 aa16.36■□□□□ 0.21
SEC61A1-206ENST00000491668 DUOX1Q9NRD9 1551 aa16.36■□□□□ 0.21
SEC61A1-206ENST00000491668 GRAPQ13588 217 aa16.36■□□□□ 0.21
SEC61A1-206ENST00000491668 TWISTNBQ3B726 338 aaPredicted RBP16.36■□□□□ 0.21
SEC61A1-206ENST00000491668 DDX46Q7L014 1031 aaKnown RBP16.36■□□□□ 0.21
SEC61A1-206ENST00000491668 SP8Q8IXZ3 490 aa16.36■□□□□ 0.21
SEC61A1-206ENST00000491668 GRAPLQ8TC17 118 aaPredicted RBP16.36■□□□□ 0.21
SEC61A1-206ENST00000491668 MYD88Q99836 296 aa16.36■□□□□ 0.21
SEC61A1-206ENST00000491668 RTFDC1Q9BY42 306 aaPredicted RBP16.36■□□□□ 0.21
SEC61A1-206ENST00000491668 TAF1DQ9H5J8 278 aaPredicted RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms