RNA–Protein interactions for RNA: ENST00000491464.1

HDAC7-225, Transcript of histone deacetylase 7, humanhuman

TSL 4

Gene HDAC7, Length 548 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-225ENST00000491464 SMC1BQ8NDV3 1235 aa12.69□□□□□ -0.38
HDAC7-225ENST00000491464 XAGE3Q8WTP9 111 aa12.69□□□□□ -0.38
HDAC7-225ENST00000491464 C7orf43Q8WVR3 580 aa12.69□□□□□ -0.38
HDAC7-225ENST00000491464 CFAP44Q96MT7 982 aa12.69□□□□□ -0.38
HDAC7-225ENST00000491464 UTP14AQ9BVJ6 771 aaKnown RBP12.69□□□□□ -0.38
HDAC7-225ENST00000491464 APAF1O14727 1248 aa12.68□□□□□ -0.38
HDAC7-225ENST00000491464 KRT24Q2M2I5 525 aa12.68□□□□□ -0.38
HDAC7-225ENST00000491464 RBM17Q96I25 401 aaKnown RBP12.68□□□□□ -0.38
HDAC7-225ENST00000491464 CHPF2Q9P2E5 772 aa12.68□□□□□ -0.38
HDAC7-225ENST00000491464 WDR90Q96KV7 1748 aa12.68□□□□□ -0.38
HDAC7-225ENST00000491464 RNF123Q5XPI4 1314 aa12.67□□□□□ -0.38
HDAC7-225ENST00000491464 GNAI1P63096 354 aa12.67□□□□□ -0.38
HDAC7-225ENST00000491464 CC2D2BQ6DHV5 1058 aa12.67□□□□□ -0.38
HDAC7-225ENST00000491464 NLRP3Q96P20 1036 aa12.67□□□□□ -0.38
HDAC7-225ENST00000491464 TMX4Q9H1E5 349 aaPredicted RBP12.67□□□□□ -0.38
HDAC7-225ENST00000491464 ZNF277Q9NRM2 450 aaPredicted RBP12.67□□□□□ -0.38
HDAC7-225ENST00000491464 DBF4Q9UBU7 674 aaPredicted RBP12.67□□□□□ -0.38
HDAC7-225ENST00000491464 HOXA10P31260 410 aaPredicted RBP12.66□□□□□ -0.38
HDAC7-225ENST00000491464 GRIPAP1Q4V328 841 aa12.66□□□□□ -0.38
HDAC7-225ENST00000491464 DUSP27Q5VZP5 1158 aa12.66□□□□□ -0.38
HDAC7-225ENST00000491464 OLFM4Q6UX06 510 aa12.66□□□□□ -0.38
HDAC7-225ENST00000491464 CRAMP1Q96RY5 1269 aa12.66□□□□□ -0.38
HDAC7-225ENST00000491464 MBIPQ9NS73 344 aa12.66□□□□□ -0.38
HDAC7-225ENST00000491464 IFT57Q9NWB7 429 aa12.66□□□□□ -0.38
HDAC7-225ENST00000491464 PPEF1O14829 653 aaPredicted RBP12.65□□□□□ -0.38
HDAC7-225ENST00000491464 TCIRG1Q13488 830 aa12.65□□□□□ -0.38
HDAC7-225ENST00000491464 SYNE4Q8N205 404 aa12.65□□□□□ -0.38
HDAC7-225ENST00000491464 HYPKQ9NX55 129 aa12.65□□□□□ -0.38
HDAC7-225ENST00000491464 TRMT112Q9UI30 125 aaKnown RBP12.65□□□□□ -0.38
HDAC7-225ENST00000491464 IQCA1LA6NCM1 817 aa12.64□□□□□ -0.39
HDAC7-225ENST00000491464 DDNO94850 711 aaPredicted RBP12.64□□□□□ -0.39
HDAC7-225ENST00000491464 ZNF853P0CG23 659 aa12.64□□□□□ -0.39
HDAC7-225ENST00000491464 IARSP41252 1262 aaKnown RBP12.64□□□□□ -0.39
HDAC7-225ENST00000491464 SLC10A5Q5PT55 438 aa12.64□□□□□ -0.39
HDAC7-225ENST00000491464 ANKRD13DQ6ZTN6 518 aa12.64□□□□□ -0.39
HDAC7-225ENST00000491464 NLRP10Q86W26 655 aa12.64□□□□□ -0.39
HDAC7-225ENST00000491464 PLBD2Q8NHP8 589 aa12.64□□□□□ -0.39
HDAC7-225ENST00000491464 JDP2Q8WYK2 163 aa12.64□□□□□ -0.39
HDAC7-225ENST00000491464 PSMD1Q99460 953 aa12.64□□□□□ -0.39
HDAC7-225ENST00000491464 CHMP4AQ9BY43 222 aa12.64□□□□□ -0.39
HDAC7-225ENST00000491464 SH3TC1Q8TE82 1336 aa12.63□□□□□ -0.39
HDAC7-225ENST00000491464 SCN4AP35499 1836 aa12.63□□□□□ -0.39
HDAC7-225ENST00000491464 ZNF316A6NFI3 1004 aaPredicted RBP12.63□□□□□ -0.39
HDAC7-225ENST00000491464 TCERG1O14776 1098 aaKnown RBP12.63□□□□□ -0.39
HDAC7-225ENST00000491464 ANP32CO43423 234 aa12.63□□□□□ -0.39
HDAC7-225ENST00000491464 LAMB2P55268 1798 aa12.63□□□□□ -0.39
HDAC7-225ENST00000491464 POTECB2RU33 542 aa12.62□□□□□ -0.39
HDAC7-225ENST00000491464 HCLS1P14317 486 aaPredicted RBP12.62□□□□□ -0.39
HDAC7-225ENST00000491464 GOLGA2Q08379 1002 aa12.62□□□□□ -0.39
HDAC7-225ENST00000491464 C3orf67Q6ZVT6 689 aa12.62□□□□□ -0.39
HDAC7-225ENST00000491464 ABCC4O15439 1325 aa12.62□□□□□ -0.39
HDAC7-225ENST00000491464 ELL2O00472 640 aaPredicted RBP12.61□□□□□ -0.39
HDAC7-225ENST00000491464 EIF6P56537 245 aaKnown RBP12.61□□□□□ -0.39
HDAC7-225ENST00000491464 DDX46Q7L014 1031 aaKnown RBP12.61□□□□□ -0.39
HDAC7-225ENST00000491464 RIC3Q7Z5B4 369 aa12.61□□□□□ -0.39
HDAC7-225ENST00000491464 LARGE2Q8N3Y3 721 aa12.61□□□□□ -0.39
HDAC7-225ENST00000491464 L3MBTL3Q96JM7 780 aaPredicted RBP12.61□□□□□ -0.39
HDAC7-225ENST00000491464 MRS2Q9HD23 443 aa12.61□□□□□ -0.39
HDAC7-225ENST00000491464 SNED1Q8TER0 1413 aa12.61□□□□□ -0.39
HDAC7-225ENST00000491464 ZNF541Q9H0D2 1346 aa12.61□□□□□ -0.39
HDAC7-225ENST00000491464 ATP5J2-PTCD1G3V325 749 aa12.6□□□□□ -0.39
HDAC7-225ENST00000491464 BBOX1O75936 387 aa12.6□□□□□ -0.39
HDAC7-225ENST00000491464 CCDC184Q52MB2 194 aa12.6□□□□□ -0.39
HDAC7-225ENST00000491464 CCDC30Q5VVM6 783 aa12.6□□□□□ -0.39
HDAC7-225ENST00000491464 CHADLQ6NUI6 762 aa12.6□□□□□ -0.39
HDAC7-225ENST00000491464 SUPT20HQ8NEM7 779 aa12.6□□□□□ -0.39
HDAC7-225ENST00000491464 ATP6V0A2Q9Y487 856 aa12.6□□□□□ -0.39
HDAC7-225ENST00000491464 FZD9O00144 591 aa12.59□□□□□ -0.39
HDAC7-225ENST00000491464 HTRA3P83110 453 aa12.59□□□□□ -0.39
HDAC7-225ENST00000491464 NIM1KQ8IY84 436 aa12.59□□□□□ -0.39
HDAC7-225ENST00000491464 GPC2Q8N158 579 aa12.59□□□□□ -0.39
HDAC7-225ENST00000491464 DNAJC5GQ8N7S2 189 aa12.59□□□□□ -0.39
HDAC7-225ENST00000491464 ISCA1Q9BUE6 129 aa12.59□□□□□ -0.39
HDAC7-225ENST00000491464 TAF1DQ9H5J8 278 aaPredicted RBP12.59□□□□□ -0.39
HDAC7-225ENST00000491464 HACL1Q9UJ83 578 aa12.59□□□□□ -0.39
HDAC7-225ENST00000491464 PPIP5K2O43314 1243 aa12.58□□□□□ -0.4
HDAC7-225ENST00000491464 DDX58O95786 925 aaKnown RBP12.58□□□□□ -0.4
HDAC7-225ENST00000491464 HSP90B1P14625 803 aaKnown RBP12.58□□□□□ -0.4
HDAC7-225ENST00000491464 GRAPQ13588 217 aa12.58□□□□□ -0.4
HDAC7-225ENST00000491464 CCDC27Q2M243 656 aa12.58□□□□□ -0.4
HDAC7-225ENST00000491464 EAPPQ56P03 285 aaPredicted RBP12.58□□□□□ -0.4
HDAC7-225ENST00000491464 DPP8Q6V1X1 898 aaPredicted RBP12.58□□□□□ -0.4
HDAC7-225ENST00000491464 TMC4Q7Z404 712 aa12.58□□□□□ -0.4
HDAC7-225ENST00000491464 LDHDQ86WU2 507 aa12.58□□□□□ -0.4
HDAC7-225ENST00000491464 DDX60Q8IY21 1712 aaKnown RBP12.58□□□□□ -0.4
HDAC7-225ENST00000491464 C8orf58Q8NAV2 365 aa12.58□□□□□ -0.4
HDAC7-225ENST00000491464 GRAPLQ8TC17 118 aaPredicted RBP12.58□□□□□ -0.4
HDAC7-225ENST00000491464 ZNF428Q96B54 188 aa12.58□□□□□ -0.4
HDAC7-225ENST00000491464 KLRG1Q96E93 195 aa12.58□□□□□ -0.4
HDAC7-225ENST00000491464 FAM89AQ96GI7 184 aa12.58□□□□□ -0.4
HDAC7-225ENST00000491464 GJA3Q9Y6H8 435 aa12.58□□□□□ -0.4
HDAC7-225ENST00000491464 LMOD1P29536 600 aaPredicted RBP12.57□□□□□ -0.4
HDAC7-225ENST00000491464 TRIM28Q13263 835 aaKnown RBP12.57□□□□□ -0.4
HDAC7-225ENST00000491464 SP8Q8IXZ3 490 aa12.57□□□□□ -0.4
HDAC7-225ENST00000491464 MPNDQ8N594 471 aa12.57□□□□□ -0.4
HDAC7-225ENST00000491464 STK31Q9BXU1 1019 aa12.57□□□□□ -0.4
HDAC7-225ENST00000491464 VPS33BQ9H267 617 aa12.57□□□□□ -0.4
HDAC7-225ENST00000491464 PHAXQ9H814 394 aaKnown RBP12.57□□□□□ -0.4
HDAC7-225ENST00000491464 CLEC11AQ9Y240 323 aa12.57□□□□□ -0.4
HDAC7-225ENST00000491464 TAF1P21675 1872 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms