RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 PDIA6Q15084 440 aa25.75■■□□□ 1.71
SREBF1-216ENST00000490796 CHADLQ6NUI6 762 aa25.75■■□□□ 1.71
SREBF1-216ENST00000490796 JDP2Q8WYK2 163 aa25.75■■□□□ 1.71
SREBF1-216ENST00000490796 NLRP3Q96P20 1036 aa25.75■■□□□ 1.71
SREBF1-216ENST00000490796 UTP14AQ9BVJ6 771 aaKnown RBP25.75■■□□□ 1.71
SREBF1-216ENST00000490796 NTSR2O95665 410 aa25.74■■□□□ 1.71
SREBF1-216ENST00000490796 HSP90AB3PQ58FF7 597 aa25.74■■□□□ 1.71
SREBF1-216ENST00000490796 RIC1Q4ADV7 1423 aa25.73■■□□□ 1.71
SREBF1-216ENST00000490796 HOXA10P31260 410 aaPredicted RBP25.73■■□□□ 1.71
SREBF1-216ENST00000490796 PROSER3Q2NL68 480 aa25.73■■□□□ 1.71
SREBF1-216ENST00000490796 GRIPAP1Q4V328 841 aa25.73■■□□□ 1.71
SREBF1-216ENST00000490796 PSMD1Q99460 953 aa25.73■■□□□ 1.71
SREBF1-216ENST00000490796 TCERG1O14776 1098 aaKnown RBP25.72■■□□□ 1.71
SREBF1-216ENST00000490796 COPS6Q7L5N1 327 aa25.72■■□□□ 1.71
SREBF1-216ENST00000490796 XAGE3Q8WTP9 111 aa25.72■■□□□ 1.71
SREBF1-216ENST00000490796 L3MBTL3Q96JM7 780 aaPredicted RBP25.72■■□□□ 1.71
SREBF1-216ENST00000490796 CRAMP1Q96RY5 1269 aa25.72■■□□□ 1.71
SREBF1-216ENST00000490796 ADAMTS8Q9UP79 889 aa25.72■■□□□ 1.71
SREBF1-216ENST00000490796 CHL1O00533 1208 aa25.71■■□□□ 1.71
SREBF1-216ENST00000490796 PPEF1O14829 653 aaPredicted RBP25.71■■□□□ 1.71
SREBF1-216ENST00000490796 LRP10Q7Z4F1 713 aa25.71■■□□□ 1.71
SREBF1-216ENST00000490796 JMYQ8N9B5 988 aa25.71■■□□□ 1.71
SREBF1-216ENST00000490796 ZNF541Q9H0D2 1346 aa25.7■■□□□ 1.71
SREBF1-216ENST00000490796 EAPPQ56P03 285 aaPredicted RBP25.7■■□□□ 1.7
SREBF1-216ENST00000490796 TAF1DQ9H5J8 278 aaPredicted RBP25.7■■□□□ 1.7
SREBF1-216ENST00000490796 DDX21Q9NR30 783 aaKnown RBP eCLIP25.7■■□□□ 1.7
SREBF1-216ENST00000490796 HACL1Q9UJ83 578 aa25.7■■□□□ 1.7
SREBF1-216ENST00000490796 EIF6P56537 245 aaKnown RBP25.69■■□□□ 1.7
SREBF1-216ENST00000490796 LDHDQ86WU2 507 aa25.69■■□□□ 1.7
SREBF1-216ENST00000490796 TRIM35Q9UPQ4 493 aa25.69■■□□□ 1.7
SREBF1-216ENST00000490796 RNF123Q5XPI4 1314 aa25.68■■□□□ 1.7
SREBF1-216ENST00000490796 POTEIP0CG38 1075 aa25.68■■□□□ 1.7
SREBF1-216ENST00000490796 POTEJP0CG39 1038 aa25.68■■□□□ 1.7
SREBF1-216ENST00000490796 KRT24Q2M2I5 525 aa25.68■■□□□ 1.7
SREBF1-216ENST00000490796 HDGFL1Q5TGJ6 251 aa25.68■■□□□ 1.7
SREBF1-216ENST00000490796 LARGE2Q8N3Y3 721 aa25.68■■□□□ 1.7
SREBF1-216ENST00000490796 CLEC11AQ9Y240 323 aa25.68■■□□□ 1.7
SREBF1-216ENST00000490796 FZD9O00144 591 aa25.67■■□□□ 1.7
SREBF1-216ENST00000490796 PRKRIP1Q9H875 184 aaPredicted RBP25.67■■□□□ 1.7
SREBF1-216ENST00000490796 SLC10A5Q5PT55 438 aa25.66■■□□□ 1.7
SREBF1-216ENST00000490796 C3orf67Q6ZVT6 689 aa25.66■■□□□ 1.7
SREBF1-216ENST00000490796 GPC2Q8N158 579 aa25.66■■□□□ 1.7
SREBF1-216ENST00000490796 CHPF2Q9P2E5 772 aa25.66■■□□□ 1.7
SREBF1-216ENST00000490796 TRMT112Q9UI30 125 aaKnown RBP25.66■■□□□ 1.7
SREBF1-216ENST00000490796 SCN4AP35499 1836 aa25.65■■□□□ 1.7
SREBF1-216ENST00000490796 EPHX2P34913 555 aa25.65■■□□□ 1.7
SREBF1-216ENST00000490796 TCIRG1Q13488 830 aa25.65■■□□□ 1.7
SREBF1-216ENST00000490796 NLRP10Q86W26 655 aa25.65■■□□□ 1.7
SREBF1-216ENST00000490796 GJA3Q9Y6H8 435 aa25.65■■□□□ 1.7
SREBF1-216ENST00000490796 HOXB7P09629 217 aa25.64■■□□□ 1.7
SREBF1-216ENST00000490796 PNMA8AQ86V59 439 aaPredicted RBP25.64■■□□□ 1.7
SREBF1-216ENST00000490796 CREBZFQ9NS37 354 aa25.64■■□□□ 1.7
SREBF1-216ENST00000490796 LMOD1P29536 600 aaPredicted RBP25.63■■□□□ 1.69
SREBF1-216ENST00000490796 CFAP44Q96MT7 982 aa25.63■■□□□ 1.69
SREBF1-216ENST00000490796 DBF4Q9UBU7 674 aaPredicted RBP25.63■■□□□ 1.69
SREBF1-216ENST00000490796 SH3TC1Q8TE82 1336 aa25.63■■□□□ 1.69
SREBF1-216ENST00000490796 HCLS1P14317 486 aaPredicted RBP25.62■■□□□ 1.69
SREBF1-216ENST00000490796 CALD1Q05682 793 aaKnown RBP25.62■■□□□ 1.69
SREBF1-216ENST00000490796 DDX46Q7L014 1031 aaKnown RBP25.62■■□□□ 1.69
SREBF1-216ENST00000490796 NIM1KQ8IY84 436 aa25.62■■□□□ 1.69
SREBF1-216ENST00000490796 ATP6V0A2Q9Y487 856 aa25.62■■□□□ 1.69
SREBF1-216ENST00000490796 PPIP5K2O43314 1243 aa25.61■■□□□ 1.69
SREBF1-216ENST00000490796 PLBD2Q8NHP8 589 aa25.61■■□□□ 1.69
SREBF1-216ENST00000490796 SNED1Q8TER0 1413 aa25.61■■□□□ 1.69
SREBF1-216ENST00000490796 ABCC4O15439 1325 aa25.61■■□□□ 1.69
SREBF1-216ENST00000490796 BBOX1O75936 387 aa25.6■■□□□ 1.69
SREBF1-216ENST00000490796 DUSP27Q5VZP5 1158 aa25.6■■□□□ 1.69
SREBF1-216ENST00000490796 ANKRD13DQ6ZTN6 518 aa25.6■■□□□ 1.69
SREBF1-216ENST00000490796 SUPT20HQ8NEM7 779 aa25.6■■□□□ 1.69
SREBF1-216ENST00000490796 HYPKQ9NX55 129 aa25.6■■□□□ 1.69
SREBF1-216ENST00000490796 APAF1O14727 1248 aa25.59■■□□□ 1.69
SREBF1-216ENST00000490796 MKRN1Q9UHC7 482 aaKnown RBP25.59■■□□□ 1.69
SREBF1-216ENST00000490796 DPP8Q6V1X1 898 aaPredicted RBP25.58■■□□□ 1.69
SREBF1-216ENST00000490796 MBIPQ9NS73 344 aa25.58■■□□□ 1.69
SREBF1-216ENST00000490796 GNAI1P63096 354 aa25.57■■□□□ 1.68
SREBF1-216ENST00000490796 VPS33BQ9H267 617 aa25.57■■□□□ 1.68
SREBF1-216ENST00000490796 ANKRD36CQ5JPF3 1778 aa25.56■■□□□ 1.68
SREBF1-216ENST00000490796 AOC3Q16853 763 aa25.56■■□□□ 1.68
SREBF1-216ENST00000490796 SP8Q8IXZ3 490 aa25.56■■□□□ 1.68
SREBF1-216ENST00000490796 MPNDQ8N594 471 aa25.56■■□□□ 1.68
SREBF1-216ENST00000490796 ZNF428Q96B54 188 aa25.56■■□□□ 1.68
SREBF1-216ENST00000490796 IFT57Q9NWB7 429 aa25.56■■□□□ 1.68
SREBF1-216ENST00000490796 TMEM88BA6NKF7 163 aa25.55■■□□□ 1.68
SREBF1-216ENST00000490796 HSPA1AP0DMV8 641 aaKnown RBP25.55■■□□□ 1.68
SREBF1-216ENST00000490796 HSPA1BP0DMV9 641 aaKnown RBP25.55■■□□□ 1.68
SREBF1-216ENST00000490796 GRAPQ13588 217 aa25.55■■□□□ 1.68
SREBF1-216ENST00000490796 SLC51AQ86UW1 340 aa25.55■■□□□ 1.68
SREBF1-216ENST00000490796 GRAPLQ8TC17 118 aaPredicted RBP25.55■■□□□ 1.68
SREBF1-216ENST00000490796 PASKQ96RG2 1323 aa25.55■■□□□ 1.68
SREBF1-216ENST00000490796 PCNTO95613 3336 aa25.54■■□□□ 1.68
SREBF1-216ENST00000490796 ATP5J2-PTCD1G3V325 749 aa25.54■■□□□ 1.68
SREBF1-216ENST00000490796 GOLGA2Q08379 1002 aa25.54■■□□□ 1.68
SREBF1-216ENST00000490796 MAP1SQ66K74 1059 aaPredicted RBP25.54■■□□□ 1.68
SREBF1-216ENST00000490796 CNTROBQ8N137 903 aa25.54■■□□□ 1.68
SREBF1-216ENST00000490796 ITGBL1O95965 494 aaPredicted RBP25.53■■□□□ 1.68
SREBF1-216ENST00000490796 TMC4Q7Z404 712 aa25.53■■□□□ 1.68
SREBF1-216ENST00000490796 RIC3Q7Z5B4 369 aa25.53■■□□□ 1.68
SREBF1-216ENST00000490796 ELL2O00472 640 aaPredicted RBP25.52■■□□□ 1.68
SREBF1-216ENST00000490796 FAM89AQ96GI7 184 aa25.52■■□□□ 1.68
SREBF1-216ENST00000490796 ISCA1Q9BUE6 129 aa25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms