RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 NTSR2O95665 410 aa20.27■□□□□ 0.84
HDAC7-224ENST00000488927 SYT17Q9BSW7 474 aa20.27■□□□□ 0.84
HDAC7-224ENST00000488927 TRMT112Q9UI30 125 aaKnown RBP20.27■□□□□ 0.84
HDAC7-224ENST00000488927 F6X3S4 739 aa20.26■□□□□ 0.83
HDAC7-224ENST00000488927 HSP90B1P14625 803 aaKnown RBP20.26■□□□□ 0.83
HDAC7-224ENST00000488927 PDE6BP35913 854 aa20.26■□□□□ 0.83
HDAC7-224ENST00000488927 SH3TC1Q8TE82 1336 aa20.26■□□□□ 0.83
HDAC7-224ENST00000488927 NEURL1BA8MQ27 555 aa20.25■□□□□ 0.83
HDAC7-224ENST00000488927 BCAR3O75815 825 aa20.25■□□□□ 0.83
HDAC7-224ENST00000488927 IGKV5-2P06315 115 aa20.25■□□□□ 0.83
HDAC7-224ENST00000488927 RCAN3Q9UKA8 241 aa20.25■□□□□ 0.83
HDAC7-224ENST00000488927 AFDNP55196 1824 aaKnown RBP20.25■□□□□ 0.83
HDAC7-224ENST00000488927 PXDNLA1KZ92 1463 aa20.24■□□□□ 0.83
HDAC7-224ENST00000488927 BEND3Q5T5X7 828 aa20.24■□□□□ 0.83
HDAC7-224ENST00000488927 SLC4A10Q6U841 1118 aa20.24■□□□□ 0.83
HDAC7-224ENST00000488927 ZBTB38Q8NAP3 1195 aaPredicted RBP20.24■□□□□ 0.83
HDAC7-224ENST00000488927 SRCIN1Q9C0H9 1055 aa20.24■□□□□ 0.83
HDAC7-224ENST00000488927 RIC1Q4ADV7 1423 aa20.24■□□□□ 0.83
HDAC7-224ENST00000488927 KIF13BQ9NQT8 1826 aa20.23■□□□□ 0.83
HDAC7-224ENST00000488927 ALDH1L1O75891 902 aa20.23■□□□□ 0.83
HDAC7-224ENST00000488927 ERFEQ4G0M1 354 aa20.23■□□□□ 0.83
HDAC7-224ENST00000488927 SLC10A5Q5PT55 438 aa20.23■□□□□ 0.83
HDAC7-224ENST00000488927 ZKSCAN2Q63HK3 967 aa20.23■□□□□ 0.83
HDAC7-224ENST00000488927 NUTM1Q86Y26 1132 aa20.23■□□□□ 0.83
HDAC7-224ENST00000488927 FRAT1Q92837 279 aaPredicted RBP20.23■□□□□ 0.83
HDAC7-224ENST00000488927 PCCAP05165 728 aaPredicted RBP20.22■□□□□ 0.83
HDAC7-224ENST00000488927 CWF19L2Q2TBE0 894 aaKnown RBP20.22■□□□□ 0.83
HDAC7-224ENST00000488927 H0YIN7 160 aa20.21■□□□□ 0.83
HDAC7-224ENST00000488927 CCT4P50991 539 aaKnown RBP20.21■□□□□ 0.83
HDAC7-224ENST00000488927 GCKRQ14397 625 aa20.21■□□□□ 0.83
HDAC7-224ENST00000488927 ATF7IPQ6VMQ6 1270 aa20.21■□□□□ 0.83
HDAC7-224ENST00000488927 KLRG2A4D1S0 409 aaPredicted RBP20.2■□□□□ 0.82
HDAC7-224ENST00000488927 CCDC24Q8N4L8 307 aa20.2■□□□□ 0.82
HDAC7-224ENST00000488927 NLGN2Q8NFZ4 835 aa20.2■□□□□ 0.82
HDAC7-224ENST00000488927 FAM89AQ96GI7 184 aa20.2■□□□□ 0.82
HDAC7-224ENST00000488927 NLRP3Q96P20 1036 aa20.2■□□□□ 0.82
HDAC7-224ENST00000488927 ABCC12Q96J65 1359 aa20.2■□□□□ 0.82
HDAC7-224ENST00000488927 C2CD5Q86YS7 1000 aa20.19■□□□□ 0.82
HDAC7-224ENST00000488927 CDHR2Q9BYE9 1310 aa20.19■□□□□ 0.82
HDAC7-224ENST00000488927 IRS4O14654 1257 aaPredicted RBP20.18■□□□□ 0.82
HDAC7-224ENST00000488927 MS4A1P11836 297 aa20.18■□□□□ 0.82
HDAC7-224ENST00000488927 TRIM27P14373 513 aa20.18■□□□□ 0.82
HDAC7-224ENST00000488927 DPEP1P16444 411 aa20.18■□□□□ 0.82
HDAC7-224ENST00000488927 A0A0G2JLW4 131 aa20.17■□□□□ 0.82
HDAC7-224ENST00000488927 H7C1W4 665 aa20.17■□□□□ 0.82
HDAC7-224ENST00000488927 CRY2Q49AN0 593 aa20.17■□□□□ 0.82
HDAC7-224ENST00000488927 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.17■□□□□ 0.82
HDAC7-224ENST00000488927 C9orf78Q9NZ63 289 aaPredicted RBP20.17■□□□□ 0.82
HDAC7-224ENST00000488927 PIM2Q9P1W9 311 aa20.17■□□□□ 0.82
HDAC7-224ENST00000488927 ABCC4O15439 1325 aa20.17■□□□□ 0.82
HDAC7-224ENST00000488927 GRM8O00222 908 aa20.16■□□□□ 0.82
HDAC7-224ENST00000488927 SRGNP10124 158 aa20.16■□□□□ 0.82
HDAC7-224ENST00000488927 HCLS1P14317 486 aaPredicted RBP20.16■□□□□ 0.82
HDAC7-224ENST00000488927 NPR1P16066 1061 aa20.16■□□□□ 0.82
HDAC7-224ENST00000488927 RTL5Q5HYW3 569 aaPredicted RBP20.16■□□□□ 0.82
HDAC7-224ENST00000488927 STYK1Q6J9G0 422 aa20.16■□□□□ 0.82
HDAC7-224ENST00000488927 MASTLQ96GX5 879 aa20.16■□□□□ 0.82
HDAC7-224ENST00000488927 PDE8AO60658 829 aa20.15■□□□□ 0.82
HDAC7-224ENST00000488927 CHRNA5P30532 468 aa20.15■□□□□ 0.82
HDAC7-224ENST00000488927 INTS3Q68E01 1043 aaKnown RBP20.15■□□□□ 0.82
HDAC7-224ENST00000488927 UBE3BQ7Z3V4 1068 aa20.15■□□□□ 0.82
HDAC7-224ENST00000488927 FTSJ3Q8IY81 847 aaKnown RBP20.15■□□□□ 0.82
HDAC7-224ENST00000488927 SYNE4Q8N205 404 aa20.15■□□□□ 0.82
HDAC7-224ENST00000488927 RPGRQ92834 1020 aaKnown RBP20.15■□□□□ 0.82
HDAC7-224ENST00000488927 ANKRD31Q8N7Z5 1873 aa20.14■□□□□ 0.81
HDAC7-224ENST00000488927 DCAF8L1A6NGE4 600 aa20.14■□□□□ 0.81
HDAC7-224ENST00000488927 KCNA3P22001 575 aa20.14■□□□□ 0.81
HDAC7-224ENST00000488927 CNKSR1Q969H4 720 aa20.14■□□□□ 0.81
HDAC7-224ENST00000488927 ALDH1B1P30837 517 aa20.13■□□□□ 0.81
HDAC7-224ENST00000488927 HOXA10P31260 410 aaPredicted RBP20.13■□□□□ 0.81
HDAC7-224ENST00000488927 SF3B3Q15393 1217 aaKnown RBP20.13■□□□□ 0.81
HDAC7-224ENST00000488927 DZIP1LQ8IYY4 767 aaKnown RBP20.13■□□□□ 0.81
HDAC7-224ENST00000488927 ZNF622Q969S3 477 aaKnown RBP eCLIP20.13■□□□□ 0.81
HDAC7-224ENST00000488927 RBM17Q96I25 401 aaKnown RBP20.13■□□□□ 0.81
HDAC7-224ENST00000488927 PLA2G12BQ9BX93 195 aa20.13■□□□□ 0.81
HDAC7-224ENST00000488927 HDAC5Q9UQL6 1122 aa20.13■□□□□ 0.81
HDAC7-224ENST00000488927 UTYO14607 1347 aa20.12■□□□□ 0.81
HDAC7-224ENST00000488927 CASP7P55210 303 aa20.12■□□□□ 0.81
HDAC7-224ENST00000488927 DALRD3Q5D0E6 543 aaKnown RBP20.12■□□□□ 0.81
HDAC7-224ENST00000488927 TTLL6Q8N841 843 aa20.12■□□□□ 0.81
HDAC7-224ENST00000488927 CLUAP1Q96AJ1 413 aa20.12■□□□□ 0.81
HDAC7-224ENST00000488927 KIAA1551Q9HCM1 1747 aa20.12■□□□□ 0.81
HDAC7-224ENST00000488927 CCDC152Q4G0S7 254 aa20.11■□□□□ 0.81
HDAC7-224ENST00000488927 TNRC6CQ9HCJ0 1690 aaKnown RBP20.1■□□□□ 0.81
HDAC7-224ENST00000488927 C3orf67Q6ZVT6 689 aa20.1■□□□□ 0.81
HDAC7-224ENST00000488927 DDX46Q7L014 1031 aaKnown RBP20.1■□□□□ 0.81
HDAC7-224ENST00000488927 JARID2Q92833 1246 aaPredicted RBP20.1■□□□□ 0.81
HDAC7-224ENST00000488927 CRAMP1Q96RY5 1269 aa20.1■□□□□ 0.81
HDAC7-224ENST00000488927 USP44Q9H0E7 712 aa20.1■□□□□ 0.81
HDAC7-224ENST00000488927 LAMB2P55268 1798 aa20.1■□□□□ 0.81
HDAC7-224ENST00000488927 N4BP2Q86UW6 1770 aaPredicted RBP20.1■□□□□ 0.81
HDAC7-224ENST00000488927 DLEC1Q9Y238 1755 aa20.09■□□□□ 0.81
HDAC7-224ENST00000488927 CTSWP56202 376 aa20.09■□□□□ 0.81
HDAC7-224ENST00000488927 GPR162Q16538 588 aa20.09■□□□□ 0.81
HDAC7-224ENST00000488927 COL11A2P13942 1736 aaPredicted RBP20.08■□□□□ 0.81
HDAC7-224ENST00000488927 DDX60Q8IY21 1712 aaKnown RBP20.08■□□□□ 0.81
HDAC7-224ENST00000488927 NBPF7P0C2Y1 421 aaPredicted RBP20.08■□□□□ 0.81
HDAC7-224ENST00000488927 TMEM57Q8N5G2 664 aa20.08■□□□□ 0.81
HDAC7-224ENST00000488927 BCS1LQ9Y276 419 aa20.08■□□□□ 0.81
HDAC7-224ENST00000488927 GRIN3BO60391 1043 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms