RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 IGFLR1Q9H665 355 aa6.92□□□□□ -1.3
CCDC93-209ENST00000488908 KIAA1024Q9UPX6 916 aa6.92□□□□□ -1.3
CCDC93-209ENST00000488908 SHISA2Q6UWI4 295 aa6.91□□□□□ -1.3
CCDC93-209ENST00000488908 KRTAP1-3Q8IUG1 177 aa6.91□□□□□ -1.3
CCDC93-209ENST00000488908 PLEKHM2Q8IWE5 1019 aa6.91□□□□□ -1.3
CCDC93-209ENST00000488908 TP53INP1Q96A56 240 aa6.91□□□□□ -1.3
CCDC93-209ENST00000488908 USP21Q9UK80 565 aa6.91□□□□□ -1.3
CCDC93-209ENST00000488908 USP17L3A6NCW0 530 aa6.9□□□□□ -1.3
CCDC93-209ENST00000488908 USP17L4A6NCW7 530 aa6.9□□□□□ -1.3
CCDC93-209ENST00000488908 PPP1R12BO60237 982 aaPredicted RBP6.9□□□□□ -1.3
CCDC93-209ENST00000488908 CLDN10P78369 228 aa6.9□□□□□ -1.3
CCDC93-209ENST00000488908 USP17L2Q6R6M4 530 aa6.9□□□□□ -1.3
CCDC93-209ENST00000488908 USP17L1Q7RTZ2 530 aa6.9□□□□□ -1.3
CCDC93-209ENST00000488908 BTLAQ7Z6A9 289 aa6.9□□□□□ -1.3
CCDC93-209ENST00000488908 ALDH16A1Q8IZ83 802 aa6.9□□□□□ -1.3
CCDC93-209ENST00000488908 FMR1NBQ8N0W7 255 aaPredicted RBP6.9□□□□□ -1.3
CCDC93-209ENST00000488908 LARGE2Q8N3Y3 721 aa6.9□□□□□ -1.3
CCDC93-209ENST00000488908 PNMA5Q96PV4 448 aa6.9□□□□□ -1.3
CCDC93-209ENST00000488908 RBM19Q9Y4C8 960 aaKnown RBP6.9□□□□□ -1.3
CCDC93-209ENST00000488908 PALM3A6NDB9 673 aaPredicted RBP6.89□□□□□ -1.31
CCDC93-209ENST00000488908 AFF1P51825 1210 aaKnown RBP6.89□□□□□ -1.31
CCDC93-209ENST00000488908 PSAPL1Q6NUJ1 521 aa6.89□□□□□ -1.31
CCDC93-209ENST00000488908 OGFOD1Q8N543 542 aa6.89□□□□□ -1.31
CCDC93-209ENST00000488908 DNAJB12Q9NXW2 375 aaKnown RBP6.89□□□□□ -1.31
CCDC93-209ENST00000488908 HYAL3O43820 417 aaPredicted RBP6.88□□□□□ -1.31
CCDC93-209ENST00000488908 RGS9O75916 674 aaPredicted RBP6.88□□□□□ -1.31
CCDC93-209ENST00000488908 STAG2Q8N3U4 1231 aa6.88□□□□□ -1.31
CCDC93-209ENST00000488908 TSEN2Q8NCE0 465 aaKnown RBP6.88□□□□□ -1.31
CCDC93-209ENST00000488908 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.88□□□□□ -1.31
CCDC93-209ENST00000488908 PCSK7Q16549 785 aa6.87□□□□□ -1.31
CCDC93-209ENST00000488908 DMRTC2Q8IXT2 367 aaPredicted RBP6.87□□□□□ -1.31
CCDC93-209ENST00000488908 SIX5Q8N196 739 aa6.87□□□□□ -1.31
CCDC93-209ENST00000488908 SSBP4Q9BWG4 385 aaPredicted RBP6.87□□□□□ -1.31
CCDC93-209ENST00000488908 NAGPAQ9UK23 515 aa6.87□□□□□ -1.31
CCDC93-209ENST00000488908 C21orf2O43822 256 aa6.86□□□□□ -1.31
CCDC93-209ENST00000488908 ATP9BO43861 1147 aa6.86□□□□□ -1.31
CCDC93-209ENST00000488908 RAD21O60216 631 aa6.86□□□□□ -1.31
CCDC93-209ENST00000488908 SLC24A1O60721 1099 aa6.86□□□□□ -1.31
CCDC93-209ENST00000488908 CCINQ13939 588 aa6.86□□□□□ -1.31
CCDC93-209ENST00000488908 LCE3BQ5TA77 95 aa6.86□□□□□ -1.31
CCDC93-209ENST00000488908 IER5Q5VY09 327 aa6.86□□□□□ -1.31
CCDC93-209ENST00000488908 DTWD1Q8N5C7 304 aa6.86□□□□□ -1.31
CCDC93-209ENST00000488908 GAS2L2Q8NHY3 880 aa6.86□□□□□ -1.31
CCDC93-209ENST00000488908 KRTAP4-12Q9BQ66 201 aa6.86□□□□□ -1.31
CCDC93-209ENST00000488908 C2orf49Q9BVC5 232 aaPredicted RBP6.86□□□□□ -1.31
CCDC93-209ENST00000488908 GSX2Q9BZM3 304 aa6.86□□□□□ -1.31
CCDC93-209ENST00000488908 MKRN1Q9UHC7 482 aaKnown RBP6.86□□□□□ -1.31
CCDC93-209ENST00000488908 ATAD2Q6PL18 1390 aa6.85□□□□□ -1.31
CCDC93-209ENST00000488908 NFKB1P19838 968 aa6.85□□□□□ -1.31
CCDC93-209ENST00000488908 MSL1Q68DK7 614 aa6.85□□□□□ -1.31
CCDC93-209ENST00000488908 ILDR2Q71H61 639 aa6.85□□□□□ -1.31
CCDC93-209ENST00000488908 POM121Q96HA1 1249 aa6.85□□□□□ -1.31
CCDC93-209ENST00000488908 NGLY1Q96IV0 654 aa6.85□□□□□ -1.31
CCDC93-209ENST00000488908 ZNF594Q96JF6 807 aaPredicted RBP6.85□□□□□ -1.31
CCDC93-209ENST00000488908 EPB42P16452 691 aa6.84□□□□□ -1.31
CCDC93-209ENST00000488908 TPRNQ4KMQ1 711 aa6.84□□□□□ -1.31
CCDC93-209ENST00000488908 FAM35AQ86V20 835 aa6.84□□□□□ -1.31
CCDC93-209ENST00000488908 CHMP7Q8WUX9 453 aaPredicted RBP6.84□□□□□ -1.31
CCDC93-209ENST00000488908 SCG3Q8WXD2 468 aaKnown RBP6.84□□□□□ -1.31
CCDC93-209ENST00000488908 UCN2Q96RP3 112 aa6.84□□□□□ -1.31
CCDC93-209ENST00000488908 POM121CA8CG34 1229 aa6.83□□□□□ -1.32
CCDC93-209ENST00000488908 TGFBR3LH3BV60 316 aa6.83□□□□□ -1.32
CCDC93-209ENST00000488908 RTN1Q16799 776 aa6.83□□□□□ -1.32
CCDC93-209ENST00000488908 HDGFL1Q5TGJ6 251 aa6.83□□□□□ -1.32
CCDC93-209ENST00000488908 FBXO11Q86XK2 927 aa6.83□□□□□ -1.32
CCDC93-209ENST00000488908 ADAMTS19Q8TE59 1207 aa6.83□□□□□ -1.32
CCDC93-209ENST00000488908 WFDC12Q8WWY7 111 aa6.83□□□□□ -1.32
CCDC93-209ENST00000488908 FRRS1LQ9P0K9 344 aa6.83□□□□□ -1.32
CCDC93-209ENST00000488908 RNF112Q9ULX5 631 aa6.83□□□□□ -1.32
CCDC93-209ENST00000488908 CPB1P15086 417 aa6.82□□□□□ -1.32
CCDC93-209ENST00000488908 IREB2P48200 963 aaKnown RBP6.82□□□□□ -1.32
CCDC93-209ENST00000488908 DKK1O94907 266 aa6.81□□□□□ -1.32
CCDC93-209ENST00000488908 MAP3K6O95382 1288 aa6.81□□□□□ -1.32
CCDC93-209ENST00000488908 SEC13P55735 322 aa6.81□□□□□ -1.32
CCDC93-209ENST00000488908 ELMSAN1Q6PJG2 1045 aa6.81□□□□□ -1.32
CCDC93-209ENST00000488908 IGF2-ASQ6U949 168 aa6.81□□□□□ -1.32
CCDC93-209ENST00000488908 WFDC8Q8IUA0 241 aa6.81□□□□□ -1.32
CCDC93-209ENST00000488908 LPIN3Q9BQK8 851 aa6.81□□□□□ -1.32
CCDC93-209ENST00000488908 NOS3P29474 1203 aa6.8□□□□□ -1.32
CCDC93-209ENST00000488908 GRIK5Q16478 980 aa6.8□□□□□ -1.32
CCDC93-209ENST00000488908 DMGDHQ9UI17 866 aaKnown RBP6.8□□□□□ -1.32
CCDC93-209ENST00000488908 RASA1P20936 1047 aa6.79□□□□□ -1.32
CCDC93-209ENST00000488908 PERM1Q5SV97 790 aa6.79□□□□□ -1.32
CCDC93-209ENST00000488908 DHX32Q7L7V1 743 aaKnown RBP6.79□□□□□ -1.32
CCDC93-209ENST00000488908 TRPM4Q8TD43 1214 aa6.79□□□□□ -1.32
CCDC93-209ENST00000488908 TTC9Q92623 222 aa6.79□□□□□ -1.32
CCDC93-209ENST00000488908 C11orf16Q9NQ32 467 aa6.79□□□□□ -1.32
CCDC93-209ENST00000488908 BCS1LQ9Y276 419 aa6.79□□□□□ -1.32
CCDC93-209ENST00000488908 UBTFP17480 764 aaKnown RBP6.78□□□□□ -1.32
CCDC93-209ENST00000488908 ARID4AP29374 1257 aaPredicted RBP6.78□□□□□ -1.32
CCDC93-209ENST00000488908 INPP5BP32019 993 aa6.78□□□□□ -1.32
CCDC93-209ENST00000488908 IDH3AP50213 366 aa6.78□□□□□ -1.32
CCDC93-209ENST00000488908 PRR23CQ6ZRP0 262 aa6.78□□□□□ -1.32
CCDC93-209ENST00000488908 KRT25Q7Z3Z0 450 aa6.78□□□□□ -1.32
CCDC93-209ENST00000488908 HINFPQ9BQA5 517 aa6.78□□□□□ -1.32
CCDC93-209ENST00000488908 GPLD1P80108 840 aa6.77□□□□□ -1.33
CCDC93-209ENST00000488908 SLC51AQ86UW1 340 aa6.77□□□□□ -1.33
CCDC93-209ENST00000488908 MEGF10Q96KG7 1140 aa6.77□□□□□ -1.33
CCDC93-209ENST00000488908 ZFATQ9P243 1243 aa6.77□□□□□ -1.33
CCDC93-209ENST00000488908 BTBD11A6QL63 1104 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms