RNA–Protein interactions for RNA: ENST00000488553.3

RN7SL561P-201, Transcript of RNA, 7SL, cytoplasmic 561, pseudogene, humanhuman

BASIC

Gene RN7SL561P, Length 281 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL561P-201ENST00000488553 TFCP2Q12800 502 aa8.21□□□□□ -1.1
RN7SL561P-201ENST00000488553 GIGYF2Q6Y7W6 1299 aaKnown RBP8.21□□□□□ -1.1
RN7SL561P-201ENST00000488553 KIF6Q6ZMV9 814 aa8.21□□□□□ -1.1
RN7SL561P-201ENST00000488553 EVI5LQ96CN4 794 aa8.21□□□□□ -1.1
RN7SL561P-201ENST00000488553 CCDC8Q9H0W5 538 aaPredicted RBP8.21□□□□□ -1.1
RN7SL561P-201ENST00000488553 SIL1Q9H173 461 aa8.21□□□□□ -1.1
RN7SL561P-201ENST00000488553 SLKQ9H2G2 1235 aaPredicted RBP8.21□□□□□ -1.1
RN7SL561P-201ENST00000488553 MAP3K15Q6ZN16 1313 aa8.21□□□□□ -1.1
RN7SL561P-201ENST00000488553 ERVV-1B6SEH8 477 aa8.2□□□□□ -1.1
RN7SL561P-201ENST00000488553 K7ELQ4 463 aaPredicted RBP8.2□□□□□ -1.1
RN7SL561P-201ENST00000488553 CSF1RP07333 972 aa8.2□□□□□ -1.1
RN7SL561P-201ENST00000488553 ATP5JP18859 108 aa8.2□□□□□ -1.1
RN7SL561P-201ENST00000488553 IL6STP40189 918 aaPredicted RBP8.2□□□□□ -1.1
RN7SL561P-201ENST00000488553 VPS72Q15906 364 aa8.2□□□□□ -1.1
RN7SL561P-201ENST00000488553 HLFQ16534 295 aa8.2□□□□□ -1.1
RN7SL561P-201ENST00000488553 ATG9AQ7Z3C6 839 aa8.2□□□□□ -1.1
RN7SL561P-201ENST00000488553 SPRYD3Q8NCJ5 442 aa8.2□□□□□ -1.1
RN7SL561P-201ENST00000488553 IL27Q8NEV9 243 aa8.2□□□□□ -1.1
RN7SL561P-201ENST00000488553 SYTL4Q96C24 671 aaPredicted RBP8.2□□□□□ -1.1
RN7SL561P-201ENST00000488553 PLA2G12BQ9BX93 195 aa8.2□□□□□ -1.1
RN7SL561P-201ENST00000488553 GPR108Q9NPR9 543 aa8.2□□□□□ -1.1
RN7SL561P-201ENST00000488553 CHMP5Q9NZZ3 219 aa8.2□□□□□ -1.1
RN7SL561P-201ENST00000488553 FRAT2O75474 233 aaPredicted RBP8.19□□□□□ -1.1
RN7SL561P-201ENST00000488553 CIAO1O76071 339 aa8.19□□□□□ -1.1
RN7SL561P-201ENST00000488553 IL15P40933 162 aaPredicted RBP8.19□□□□□ -1.1
RN7SL561P-201ENST00000488553 EIF5P55010 431 aaKnown RBP8.19□□□□□ -1.1
RN7SL561P-201ENST00000488553 HSP90AB3PQ58FF7 597 aa8.19□□□□□ -1.1
RN7SL561P-201ENST00000488553 TNNI3KQ59H18 835 aa8.19□□□□□ -1.1
RN7SL561P-201ENST00000488553 RTL5Q5HYW3 569 aaPredicted RBP8.19□□□□□ -1.1
RN7SL561P-201ENST00000488553 INTS5Q6P9B9 1019 aaKnown RBP8.19□□□□□ -1.1
RN7SL561P-201ENST00000488553 NLRP10Q86W26 655 aa8.19□□□□□ -1.1
RN7SL561P-201ENST00000488553 FNBP4Q8N3X1 1017 aaPredicted RBP8.19□□□□□ -1.1
RN7SL561P-201ENST00000488553 ZBTB38Q8NAP3 1195 aaPredicted RBP8.19□□□□□ -1.1
RN7SL561P-201ENST00000488553 NGLY1Q96IV0 654 aa8.19□□□□□ -1.1
RN7SL561P-201ENST00000488553 LSG1Q9H089 658 aaKnown RBP8.19□□□□□ -1.1
RN7SL561P-201ENST00000488553 IL25Q9H293 177 aa8.19□□□□□ -1.1
RN7SL561P-201ENST00000488553 ANO2Q9NQ90 1003 aa8.19□□□□□ -1.1
RN7SL561P-201ENST00000488553 SNRKQ9NRH2 765 aa8.19□□□□□ -1.1
RN7SL561P-201ENST00000488553 TLR7Q9NYK1 1049 aaKnown RBP8.19□□□□□ -1.1
RN7SL561P-201ENST00000488553 CIZ1Q9ULV3 898 aaPredicted RBP8.19□□□□□ -1.1
RN7SL561P-201ENST00000488553 ZBTB1Q9Y2K1 713 aa8.19□□□□□ -1.1
RN7SL561P-201ENST00000488553 FPGT-TNNI3KV9GXZ4 949 aa8.19□□□□□ -1.1
RN7SL561P-201ENST00000488553 NRAPQ86VF7 1730 aa8.19□□□□□ -1.1
RN7SL561P-201ENST00000488553 ARFGEF2Q9Y6D5 1785 aa8.19□□□□□ -1.1
RN7SL561P-201ENST00000488553 JCADQ9P266 1359 aa8.19□□□□□ -1.1
RN7SL561P-201ENST00000488553 NUP188Q5SRE5 1749 aa8.18□□□□□ -1.1
RN7SL561P-201ENST00000488553 TUBGCP6Q96RT7 1819 aa8.18□□□□□ -1.1
RN7SL561P-201ENST00000488553 EYA2O00167 538 aa8.18□□□□□ -1.1
RN7SL561P-201ENST00000488553 HIP1O00291 1037 aa8.18□□□□□ -1.1
RN7SL561P-201ENST00000488553 MCCP23508 829 aa8.18□□□□□ -1.1
RN7SL561P-201ENST00000488553 HSPA4P34932 840 aa8.18□□□□□ -1.1
RN7SL561P-201ENST00000488553 ZNF34Q8IZ26 560 aa8.18□□□□□ -1.1
RN7SL561P-201ENST00000488553 RUFY2Q8WXA3 655 aa8.18□□□□□ -1.1
RN7SL561P-201ENST00000488553 FAM89AQ96GI7 184 aa8.18□□□□□ -1.1
RN7SL561P-201ENST00000488553 ACSBG1Q96GR2 724 aa8.18□□□□□ -1.1
RN7SL561P-201ENST00000488553 CCDC87Q9NVE4 849 aa8.18□□□□□ -1.1
RN7SL561P-201ENST00000488553 DBNLQ9UJU6 430 aaKnown RBP8.18□□□□□ -1.1
RN7SL561P-201ENST00000488553 FBXO3Q9UK99 471 aa8.18□□□□□ -1.1
RN7SL561P-201ENST00000488553 PALD1Q9ULE6 856 aa8.18□□□□□ -1.1
RN7SL561P-201ENST00000488553 ZNF330Q9Y3S2 320 aaPredicted RBP8.18□□□□□ -1.1
RN7SL561P-201ENST00000488553 CCDC9Q9Y3X0 531 aaKnown RBP8.18□□□□□ -1.1
RN7SL561P-201ENST00000488553 CDHR2Q9BYE9 1310 aa8.18□□□□□ -1.1
RN7SL561P-201ENST00000488553 BCL9LQ86UU0 1499 aa8.18□□□□□ -1.1
RN7SL561P-201ENST00000488553 LOC102724428A0A0B4J2F2 783 aa8.17□□□□□ -1.1
RN7SL561P-201ENST00000488553 ST18O60284 1047 aa8.17□□□□□ -1.1
RN7SL561P-201ENST00000488553 ATP6V1AP38606 617 aa8.17□□□□□ -1.1
RN7SL561P-201ENST00000488553 SIK1P57059 783 aa8.17□□□□□ -1.1
RN7SL561P-201ENST00000488553 ITPK1Q13572 414 aa8.17□□□□□ -1.1
RN7SL561P-201ENST00000488553 CWC27Q6UX04 472 aaKnown RBP8.17□□□□□ -1.1
RN7SL561P-201ENST00000488553 KIAA1211Q6ZU35 1233 aa8.17□□□□□ -1.1
RN7SL561P-201ENST00000488553 TICAM2Q86XR7 235 aa8.17□□□□□ -1.1
RN7SL561P-201ENST00000488553 DZIP3Q86Y13 1208 aaKnown RBP8.17□□□□□ -1.1
RN7SL561P-201ENST00000488553 SMARCC1Q92922 1105 aaPredicted RBP8.17□□□□□ -1.1
RN7SL561P-201ENST00000488553 KCNB2Q92953 911 aa8.17□□□□□ -1.1
RN7SL561P-201ENST00000488553 ARXQ96QS3 562 aa8.17□□□□□ -1.1
RN7SL561P-201ENST00000488553 BOLA2Q9H3K6 86 aa8.17□□□□□ -1.1
RN7SL561P-201ENST00000488553 ITGB4P16144 1822 aa8.17□□□□□ -1.1
RN7SL561P-201ENST00000488553 KCNQ2O43526 872 aa8.16□□□□□ -1.1
RN7SL561P-201ENST00000488553 CRKLP46109 303 aaKnown RBP8.16□□□□□ -1.1
RN7SL561P-201ENST00000488553 MCM2P49736 904 aa8.16□□□□□ -1.1
RN7SL561P-201ENST00000488553 NEK4P51957 841 aa8.16□□□□□ -1.1
RN7SL561P-201ENST00000488553 FAM98CQ17RN3 349 aaKnown RBP8.16□□□□□ -1.1
RN7SL561P-201ENST00000488553 CCDC57Q2TAC2 916 aa8.16□□□□□ -1.1
RN7SL561P-201ENST00000488553 LRRC24Q50LG9 513 aa8.16□□□□□ -1.1
RN7SL561P-201ENST00000488553 SPATA31A6Q5VVP1 1343 aa8.16□□□□□ -1.1
RN7SL561P-201ENST00000488553 SYNE4Q8N205 404 aa8.16□□□□□ -1.1
RN7SL561P-201ENST00000488553 TTLL11Q8NHH1 800 aa8.16□□□□□ -1.1
RN7SL561P-201ENST00000488553 RAD50Q92878 1312 aa8.16□□□□□ -1.1
RN7SL561P-201ENST00000488553 ZNF594Q96JF6 807 aaPredicted RBP8.16□□□□□ -1.1
RN7SL561P-201ENST00000488553 C8orf37Q96NL8 207 aa8.16□□□□□ -1.1
RN7SL561P-201ENST00000488553 HAUS7Q99871 368 aa8.16□□□□□ -1.1
RN7SL561P-201ENST00000488553 DBNDD2Q9BQY9 259 aa8.16□□□□□ -1.1
RN7SL561P-201ENST00000488553 PUS3Q9BZE2 481 aaKnown RBP8.16□□□□□ -1.1
RN7SL561P-201ENST00000488553 DIAPH3Q9NSV4 1193 aa8.16□□□□□ -1.1
RN7SL561P-201ENST00000488553 NWD2Q9ULI1 1742 aa8.16□□□□□ -1.1
RN7SL561P-201ENST00000488553 TBC1D2BQ9UPU7 963 aa8.16□□□□□ -1.1
RN7SL561P-201ENST00000488553 CHMP3Q9Y3E7 222 aa8.16□□□□□ -1.1
RN7SL561P-201ENST00000488553 WNK3Q9BYP7 1800 aa8.15□□□□□ -1.1
RN7SL561P-201ENST00000488553 GPTP24298 496 aa8.15□□□□□ -1.1
RN7SL561P-201ENST00000488553 TIMM10P62072 90 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms