RNA–Protein interactions for RNA: ENST00000488214.1

PDAP1-203, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-203ENST00000488214 CCDC191Q8NCU4 936 aa8.6□□□□□ -1.03
PDAP1-203ENST00000488214 AK7Q96M32 723 aa8.6□□□□□ -1.03
PDAP1-203ENST00000488214 ISCA1Q9BUE6 129 aa8.6□□□□□ -1.03
PDAP1-203ENST00000488214 DCTPP1Q9H773 170 aa8.6□□□□□ -1.03
PDAP1-203ENST00000488214 LRP5O75197 1615 aa8.6□□□□□ -1.03
PDAP1-203ENST00000488214 A0A1B0GUL6 1792 aa8.6□□□□□ -1.03
PDAP1-203ENST00000488214 QSER1Q2KHR3 1735 aa8.6□□□□□ -1.03
PDAP1-203ENST00000488214 TNRC6CQ9HCJ0 1690 aaKnown RBP8.59□□□□□ -1.03
PDAP1-203ENST00000488214 UBN2Q6ZU65 1347 aa8.59□□□□□ -1.03
PDAP1-203ENST00000488214 ERVV-1B6SEH8 477 aa8.59□□□□□ -1.03
PDAP1-203ENST00000488214 PHF14O94880 888 aa8.59□□□□□ -1.03
PDAP1-203ENST00000488214 PDE4AP27815 886 aa8.59□□□□□ -1.03
PDAP1-203ENST00000488214 MTX1Q13505 466 aa8.59□□□□□ -1.03
PDAP1-203ENST00000488214 SSH3Q8TE77 659 aa8.59□□□□□ -1.03
PDAP1-203ENST00000488214 ZNF652Q9Y2D9 606 aa8.59□□□□□ -1.03
PDAP1-203ENST00000488214 CHMP3Q9Y3E7 222 aa8.59□□□□□ -1.03
PDAP1-203ENST00000488214 SMARCA5O60264 1052 aaPredicted RBP8.58□□□□□ -1.04
PDAP1-203ENST00000488214 CASP7P55210 303 aa8.58□□□□□ -1.04
PDAP1-203ENST00000488214 OS9Q13438 667 aaPredicted RBP8.58□□□□□ -1.04
PDAP1-203ENST00000488214 POLA2Q14181 598 aa8.58□□□□□ -1.04
PDAP1-203ENST00000488214 EPHA10Q5JZY3 1008 aa8.58□□□□□ -1.04
PDAP1-203ENST00000488214 SLC27A3Q5K4L6 730 aa8.58□□□□□ -1.04
PDAP1-203ENST00000488214 RC3H1Q5TC82 1133 aaKnown RBP8.58□□□□□ -1.04
PDAP1-203ENST00000488214 NLRP10Q86W26 655 aa8.58□□□□□ -1.04
PDAP1-203ENST00000488214 KAZALD1Q96I82 304 aa8.58□□□□□ -1.04
PDAP1-203ENST00000488214 LRRC4BQ9NT99 713 aa8.58□□□□□ -1.04
PDAP1-203ENST00000488214 RTCBQ9Y3I0 505 aaKnown RBP8.58□□□□□ -1.04
PDAP1-203ENST00000488214 FAM177BA6PVY3 158 aa8.57□□□□□ -1.04
PDAP1-203ENST00000488214 H7C1W4 665 aa8.57□□□□□ -1.04
PDAP1-203ENST00000488214 RPS6KA4O75676 772 aa8.57□□□□□ -1.04
PDAP1-203ENST00000488214 SURF6O75683 361 aaKnown RBP8.57□□□□□ -1.04
PDAP1-203ENST00000488214 APBA3O96018 575 aa8.57□□□□□ -1.04
PDAP1-203ENST00000488214 PCCAP05165 728 aaPredicted RBP8.57□□□□□ -1.04
PDAP1-203ENST00000488214 TXNRD1Q16881 649 aa8.57□□□□□ -1.04
PDAP1-203ENST00000488214 SMIM5Q71RC9 77 aa8.57□□□□□ -1.04
PDAP1-203ENST00000488214 LRRCC1Q9C099 1032 aa8.57□□□□□ -1.04
PDAP1-203ENST00000488214 SRP68Q9UHB9 627 aaKnown RBP8.57□□□□□ -1.04
PDAP1-203ENST00000488214 TRMT112Q9UI30 125 aaKnown RBP8.57□□□□□ -1.04
PDAP1-203ENST00000488214 PA2G4Q9UQ80 394 aaKnown RBP8.57□□□□□ -1.04
PDAP1-203ENST00000488214 ARAP2Q8WZ64 1704 aa8.57□□□□□ -1.04
PDAP1-203ENST00000488214 CDHR2Q9BYE9 1310 aa8.56□□□□□ -1.04
PDAP1-203ENST00000488214 ZPR1O75312 459 aa8.56□□□□□ -1.04
PDAP1-203ENST00000488214 TRIM28Q13263 835 aaKnown RBP8.56□□□□□ -1.04
PDAP1-203ENST00000488214 RABL6Q3YEC7 729 aaPredicted RBP8.56□□□□□ -1.04
PDAP1-203ENST00000488214 USPL1Q5W0Q7 1092 aa8.56□□□□□ -1.04
PDAP1-203ENST00000488214 AMIGO3Q86WK7 504 aa8.56□□□□□ -1.04
PDAP1-203ENST00000488214 ZNF34Q8IZ26 560 aa8.56□□□□□ -1.04
PDAP1-203ENST00000488214 ZBTB38Q8NAP3 1195 aaPredicted RBP8.56□□□□□ -1.04
PDAP1-203ENST00000488214 FAM89AQ96GI7 184 aa8.56□□□□□ -1.04
PDAP1-203ENST00000488214 SIL1Q9H173 461 aa8.56□□□□□ -1.04
PDAP1-203ENST00000488214 TSHZ2Q9NRE2 1034 aa8.56□□□□□ -1.04
PDAP1-203ENST00000488214 NIP7Q9Y221 180 aaKnown RBP eCLIP8.56□□□□□ -1.04
PDAP1-203ENST00000488214 USP42Q9H9J4 1324 aaKnown RBP8.55□□□□□ -1.04
PDAP1-203ENST00000488214 TAF1P21675 1872 aa8.55□□□□□ -1.04
PDAP1-203ENST00000488214 FOXO4P98177 505 aa8.55□□□□□ -1.04
PDAP1-203ENST00000488214 FAM161AQ3B820 660 aa8.55□□□□□ -1.04
PDAP1-203ENST00000488214 PARP10Q53GL7 1025 aa8.55□□□□□ -1.04
PDAP1-203ENST00000488214 HSP90AB4PQ58FF6 505 aa8.55□□□□□ -1.04
PDAP1-203ENST00000488214 LMBR1LQ6UX01 489 aa8.55□□□□□ -1.04
PDAP1-203ENST00000488214 BICDL1Q6ZP65 573 aa8.55□□□□□ -1.04
PDAP1-203ENST00000488214 KLHDC4Q8TBB5 520 aa8.55□□□□□ -1.04
PDAP1-203ENST00000488214 OTUD7AQ8TE49 926 aaPredicted RBP8.55□□□□□ -1.04
PDAP1-203ENST00000488214 CCDC85AQ96PX6 553 aaPredicted RBP8.55□□□□□ -1.04
PDAP1-203ENST00000488214 NARFQ9UHQ1 456 aa8.55□□□□□ -1.04
PDAP1-203ENST00000488214 SH3TC1Q8TE82 1336 aa8.54□□□□□ -1.04
PDAP1-203ENST00000488214 CACNA1SQ13698 1873 aa8.54□□□□□ -1.04
PDAP1-203ENST00000488214 ABCC12Q96J65 1359 aa8.54□□□□□ -1.04
PDAP1-203ENST00000488214 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.54□□□□□ -1.04
PDAP1-203ENST00000488214 IRS4O14654 1257 aaPredicted RBP8.54□□□□□ -1.04
PDAP1-203ENST00000488214 RAB11FIP3O75154 756 aa8.54□□□□□ -1.04
PDAP1-203ENST00000488214 NTSR2O95665 410 aa8.54□□□□□ -1.04
PDAP1-203ENST00000488214 RFC4P35249 363 aa8.54□□□□□ -1.04
PDAP1-203ENST00000488214 CTSWP56202 376 aa8.54□□□□□ -1.04
PDAP1-203ENST00000488214 ZNF827Q17R98 1081 aa8.54□□□□□ -1.04
PDAP1-203ENST00000488214 SUSD4Q5VX71 490 aa8.54□□□□□ -1.04
PDAP1-203ENST00000488214 ERC1Q8IUD2 1116 aa8.54□□□□□ -1.04
PDAP1-203ENST00000488214 SYNE4Q8N205 404 aa8.54□□□□□ -1.04
PDAP1-203ENST00000488214 RHPN1Q8TCX5 695 aa8.54□□□□□ -1.04
PDAP1-203ENST00000488214 KIF1BPQ96EK5 621 aa8.54□□□□□ -1.04
PDAP1-203ENST00000488214 UTP14AQ9BVJ6 771 aaKnown RBP8.54□□□□□ -1.04
PDAP1-203ENST00000488214 PLA2G12BQ9BX93 195 aa8.54□□□□□ -1.04
PDAP1-203ENST00000488214 IL1RAPL2Q9NP60 686 aa8.54□□□□□ -1.04
PDAP1-203ENST00000488214 ZNF609O15014 1411 aa8.54□□□□□ -1.04
PDAP1-203ENST00000488214 RIC1Q4ADV7 1423 aa8.54□□□□□ -1.04
PDAP1-203ENST00000488214 COL4A1P02462 1669 aa8.53□□□□□ -1.04
PDAP1-203ENST00000488214 CARMIL3Q8ND23 1372 aa8.53□□□□□ -1.04
PDAP1-203ENST00000488214 RGL2O15211 777 aa8.53□□□□□ -1.04
PDAP1-203ENST00000488214 MX1P20591 662 aa8.53□□□□□ -1.04
PDAP1-203ENST00000488214 SSFA2P28290 1259 aa8.53□□□□□ -1.04
PDAP1-203ENST00000488214 RFX5P48382 616 aaPredicted RBP8.53□□□□□ -1.04
PDAP1-203ENST00000488214 G3BP1Q13283 466 aaKnown RBP eCLIP8.53□□□□□ -1.04
PDAP1-203ENST00000488214 TAF7LQ5H9L4 462 aa8.53□□□□□ -1.04
PDAP1-203ENST00000488214 TRAPPC3LQ5T215 181 aa8.53□□□□□ -1.04
PDAP1-203ENST00000488214 TBC1D9BQ66K14 1250 aa8.53□□□□□ -1.04
PDAP1-203ENST00000488214 CLEC4GQ6UXB4 293 aa8.53□□□□□ -1.04
PDAP1-203ENST00000488214 NUTM1Q86Y26 1132 aa8.53□□□□□ -1.04
PDAP1-203ENST00000488214 C16orf71Q8IYS4 520 aaPredicted RBP8.53□□□□□ -1.04
PDAP1-203ENST00000488214 ARHGEF1Q92888 912 aaKnown RBP8.53□□□□□ -1.04
PDAP1-203ENST00000488214 BCL2L12Q9HB09 334 aa8.53□□□□□ -1.04
PDAP1-203ENST00000488214 NOP58Q9Y2X3 529 aaKnown RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms