RNA–Protein interactions for RNA: ENST00000487065.5

STAG1-208, Transcript of stromal antigen 1, humanhuman

TSL 1 (best)

Gene STAG1, Length 2,914 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1-208ENST00000487065 ERBB4Q15303 1308 aa9.58□□□□□ -0.88
STAG1-208ENST00000487065 FKBP1BP68106 108 aa9.58□□□□□ -0.88
STAG1-208ENST00000487065 USHBP1Q8N6Y0 703 aa9.58□□□□□ -0.88
STAG1-208ENST00000487065 POLR3GLQ9BT43 218 aa9.58□□□□□ -0.88
STAG1-208ENST00000487065 BEGAINQ9BUH8 593 aa9.58□□□□□ -0.88
STAG1-208ENST00000487065 ZNF652Q9Y2D9 606 aa9.58□□□□□ -0.88
STAG1-208ENST00000487065 RNMTO43148 476 aaKnown RBP9.57□□□□□ -0.88
STAG1-208ENST00000487065 NOGQ13253 232 aa9.57□□□□□ -0.88
STAG1-208ENST00000487065 PRR5LQ6MZQ0 368 aa9.57□□□□□ -0.88
STAG1-208ENST00000487065 CRAMP1Q96RY5 1269 aa9.57□□□□□ -0.88
STAG1-208ENST00000487065 IFT57Q9NWB7 429 aa9.57□□□□□ -0.88
STAG1-208ENST00000487065 CAPN15O75808 1086 aa9.57□□□□□ -0.88
STAG1-208ENST00000487065 IARSP41252 1262 aaKnown RBP9.57□□□□□ -0.88
STAG1-208ENST00000487065 DUSP27Q5VZP5 1158 aa9.57□□□□□ -0.88
STAG1-208ENST00000487065 CAPNS2Q96L46 248 aa9.57□□□□□ -0.88
STAG1-208ENST00000487065 CNTROBQ8N137 903 aa9.56□□□□□ -0.88
STAG1-208ENST00000487065 GAS2L2Q8NHY3 880 aa9.56□□□□□ -0.88
STAG1-208ENST00000487065 MCOLN1Q9GZU1 580 aa9.56□□□□□ -0.88
STAG1-208ENST00000487065 MS4A1P11836 297 aa9.56□□□□□ -0.88
STAG1-208ENST00000487065 ALDH1L2Q3SY69 923 aa9.56□□□□□ -0.88
STAG1-208ENST00000487065 WWC1Q8IX03 1113 aa9.56□□□□□ -0.88
STAG1-208ENST00000487065 SRP68Q9UHB9 627 aaKnown RBP9.56□□□□□ -0.88
STAG1-208ENST00000487065 EMILIN1Q9Y6C2 1016 aa9.56□□□□□ -0.88
STAG1-208ENST00000487065 CAMTA2O94983 1202 aa9.55□□□□□ -0.88
STAG1-208ENST00000487065 TMPOP42166 694 aaKnown RBP9.55□□□□□ -0.88
STAG1-208ENST00000487065 RBM42Q9BTD8 480 aaKnown RBP9.55□□□□□ -0.88
STAG1-208ENST00000487065 HOXB7P09629 217 aa9.55□□□□□ -0.88
STAG1-208ENST00000487065 CCDC102AQ96A19 550 aa9.55□□□□□ -0.88
STAG1-208ENST00000487065 NYXQ9GZU5 481 aa9.55□□□□□ -0.88
STAG1-208ENST00000487065 ADARB2Q9NS39 739 aaKnown RBP9.55□□□□□ -0.88
STAG1-208ENST00000487065 ERVV-1B6SEH8 477 aa9.55□□□□□ -0.88
STAG1-208ENST00000487065 NEFMP07197 916 aa9.55□□□□□ -0.88
STAG1-208ENST00000487065 HTRA3P83110 453 aa9.55□□□□□ -0.88
STAG1-208ENST00000487065 FAM9BQ8IZU0 186 aa9.55□□□□□ -0.88
STAG1-208ENST00000487065 MKRN1Q9UHC7 482 aaKnown RBP9.55□□□□□ -0.88
STAG1-208ENST00000487065 NUP98P52948 1817 aa9.54□□□□□ -0.88
STAG1-208ENST00000487065 PRPF40BQ6NWY9 871 aaKnown RBP9.54□□□□□ -0.88
STAG1-208ENST00000487065 MAPK8IP3Q9UPT6 1336 aa9.54□□□□□ -0.88
STAG1-208ENST00000487065 LMOD1P29536 600 aaPredicted RBP9.54□□□□□ -0.88
STAG1-208ENST00000487065 EIF6P56537 245 aaKnown RBP9.53□□□□□ -0.88
STAG1-208ENST00000487065 PDE3AQ14432 1141 aa9.53□□□□□ -0.88
STAG1-208ENST00000487065 NBPF15Q8N660 670 aa9.53□□□□□ -0.88
STAG1-208ENST00000487065 ARHGAP45Q92619 1136 aa9.53□□□□□ -0.88
STAG1-208ENST00000487065 RPS12P25398 132 aaKnown RBP9.53□□□□□ -0.88
STAG1-208ENST00000487065 CTU1Q7Z7A3 348 aaKnown RBP9.53□□□□□ -0.88
STAG1-208ENST00000487065 DNAJC10Q8IXB1 793 aa9.53□□□□□ -0.88
STAG1-208ENST00000487065 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.53□□□□□ -0.88
STAG1-208ENST00000487065 CNBD1Q8NA66 436 aa9.53□□□□□ -0.88
STAG1-208ENST00000487065 SSC5DA1L4H1 1573 aa9.53□□□□□ -0.88
STAG1-208ENST00000487065 GNAI1P63096 354 aa9.52□□□□□ -0.88
STAG1-208ENST00000487065 TRIM35Q9UPQ4 493 aa9.52□□□□□ -0.88
STAG1-208ENST00000487065 PITPNM2Q9BZ72 1349 aa9.52□□□□□ -0.89
STAG1-208ENST00000487065 INTS3Q68E01 1043 aaKnown RBP9.52□□□□□ -0.89
STAG1-208ENST00000487065 ZNF541Q9H0D2 1346 aa9.52□□□□□ -0.89
STAG1-208ENST00000487065 DPF2Q92785 391 aa9.52□□□□□ -0.89
STAG1-208ENST00000487065 ZNF496Q96IT1 587 aaPredicted RBP9.51□□□□□ -0.89
STAG1-208ENST00000487065 DDNO94850 711 aaPredicted RBP9.51□□□□□ -0.89
STAG1-208ENST00000487065 SLC10A5Q5PT55 438 aa9.51□□□□□ -0.89
STAG1-208ENST00000487065 GPR101Q96P66 508 aaPredicted RBP9.51□□□□□ -0.89
STAG1-208ENST00000487065 SETDB2Q96T68 719 aa9.51□□□□□ -0.89
STAG1-208ENST00000487065 U2AF1L5P0DN76 240 aaPredicted RBP9.5□□□□□ -0.89
STAG1-208ENST00000487065 U2AF1Q01081 240 aaKnown RBP eCLIP9.5□□□□□ -0.89
STAG1-208ENST00000487065 CFAP44Q96MT7 982 aa9.5□□□□□ -0.89
STAG1-208ENST00000487065 CHMP4BQ9H444 224 aaKnown RBP9.5□□□□□ -0.89
STAG1-208ENST00000487065 ZBTB1Q9Y2K1 713 aa9.5□□□□□ -0.89
STAG1-208ENST00000487065 SAPCD2Q86UD0 394 aa9.5□□□□□ -0.89
STAG1-208ENST00000487065 FMNL2Q96PY5 1086 aa9.5□□□□□ -0.89
STAG1-208ENST00000487065 COL4A5P29400 1685 aa9.5□□□□□ -0.89
STAG1-208ENST00000487065 TBC1D9BQ66K14 1250 aa9.49□□□□□ -0.89
STAG1-208ENST00000487065 SYNE4Q8N205 404 aa9.49□□□□□ -0.89
STAG1-208ENST00000487065 APAF1O14727 1248 aa9.49□□□□□ -0.89
STAG1-208ENST00000487065 SLC10A3P09131 477 aa9.49□□□□□ -0.89
STAG1-208ENST00000487065 RCAN3Q9UKA8 241 aa9.49□□□□□ -0.89
STAG1-208ENST00000487065 ECM29Q5VYK3 1845 aa9.49□□□□□ -0.89
STAG1-208ENST00000487065 CHL1O00533 1208 aa9.49□□□□□ -0.89
STAG1-208ENST00000487065 TNIP1Q15025 636 aa9.49□□□□□ -0.89
STAG1-208ENST00000487065 TPTE2Q6XPS3 522 aa9.49□□□□□ -0.89
STAG1-208ENST00000487065 NFATC2IPQ8NCF5 419 aa9.49□□□□□ -0.89
STAG1-208ENST00000487065 GPRC5DQ9NZD1 345 aa9.49□□□□□ -0.89
STAG1-208ENST00000487065 C21orf2O43822 256 aa9.48□□□□□ -0.89
STAG1-208ENST00000487065 RRP1P56182 461 aaKnown RBP9.48□□□□□ -0.89
STAG1-208ENST00000487065 A0A1W2PPC1 479 aa9.48□□□□□ -0.89
STAG1-208ENST00000487065 FAM155AB1AL88 458 aaPredicted RBP9.48□□□□□ -0.89
STAG1-208ENST00000487065 CDC37L1Q7L3B6 337 aa9.48□□□□□ -0.89
STAG1-208ENST00000487065 JDP2Q8WYK2 163 aa9.48□□□□□ -0.89
STAG1-208ENST00000487065 KIF16BQ96L93 1317 aa9.48□□□□□ -0.89
STAG1-208ENST00000487065 NEFLP07196 543 aa9.47□□□□□ -0.89
STAG1-208ENST00000487065 SCNN1DP51172 638 aa9.47□□□□□ -0.89
STAG1-208ENST00000487065 CST9Q5W186 159 aa9.47□□□□□ -0.89
STAG1-208ENST00000487065 PRKAR2BP31323 418 aa9.47□□□□□ -0.89
STAG1-208ENST00000487065 DGKZQ13574 1117 aa9.47□□□□□ -0.89
STAG1-208ENST00000487065 PARP10Q53GL7 1025 aa9.46□□□□□ -0.89
STAG1-208ENST00000487065 RBM17Q96I25 401 aaKnown RBP9.46□□□□□ -0.89
STAG1-208ENST00000487065 COL4A1P02462 1669 aa9.46□□□□□ -0.9
STAG1-208ENST00000487065 CCDC85CA6NKD9 419 aa9.46□□□□□ -0.9
STAG1-208ENST00000487065 GPR153Q6NV75 609 aa9.46□□□□□ -0.9
STAG1-208ENST00000487065 ZNF622Q969S3 477 aaKnown RBP eCLIP9.45□□□□□ -0.9
STAG1-208ENST00000487065 PPP4R2Q9NY27 417 aa9.45□□□□□ -0.9
STAG1-208ENST00000487065 FMR1Q06787 632 aaKnown RBP eCLIP9.45□□□□□ -0.92e-16■■■■■ 57.7
STAG1-208ENST00000487065 ZNF790Q6PG37 636 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms