RNA–Protein interactions for RNA: ENST00000486793.5

GMDS-205, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 3

Gene GMDS, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-205ENST00000486793 RNF123Q5XPI4 1314 aa24.7■■□□□ 1.54
GMDS-205ENST00000486793 TCERG1O14776 1098 aaKnown RBP24.7■■□□□ 1.54
GMDS-205ENST00000486793 NTSR2O95665 410 aa24.7■■□□□ 1.54
GMDS-205ENST00000486793 EIF2S2P20042 333 aaKnown RBP24.7■■□□□ 1.54
GMDS-205ENST00000486793 PDIA6Q15084 440 aa24.7■■□□□ 1.54
GMDS-205ENST00000486793 C3orf67Q6ZVT6 689 aa24.7■■□□□ 1.54
GMDS-205ENST00000486793 GPC2Q8N158 579 aa24.7■■□□□ 1.54
GMDS-205ENST00000486793 RBM17Q96I25 401 aaKnown RBP24.7■■□□□ 1.54
GMDS-205ENST00000486793 LRP10Q7Z4F1 713 aa24.69■■□□□ 1.54
GMDS-205ENST00000486793 PNMA8AQ86V59 439 aaPredicted RBP24.69■■□□□ 1.54
GMDS-205ENST00000486793 CRAMP1Q96RY5 1269 aa24.69■■□□□ 1.54
GMDS-205ENST00000486793 SNED1Q8TER0 1413 aa24.69■■□□□ 1.54
GMDS-205ENST00000486793 TMEM88BA6NKF7 163 aa24.68■■□□□ 1.54
GMDS-205ENST00000486793 PPP1R42Q7Z4L9 355 aa24.68■■□□□ 1.54
GMDS-205ENST00000486793 SLC51AQ86UW1 340 aa24.68■■□□□ 1.54
GMDS-205ENST00000486793 GJA3Q9Y6H8 435 aa24.68■■□□□ 1.54
GMDS-205ENST00000486793 IBTKQ9P2D0 1353 aaPredicted RBP24.67■■□□□ 1.54
GMDS-205ENST00000486793 ARFGEF2Q9Y6D5 1785 aa24.67■■□□□ 1.54
GMDS-205ENST00000486793 EIF6P56537 245 aaKnown RBP24.67■■□□□ 1.54
GMDS-205ENST00000486793 GRIPAP1Q4V328 841 aa24.67■■□□□ 1.54
GMDS-205ENST00000486793 MAP1SQ66K74 1059 aaPredicted RBP24.67■■□□□ 1.54
GMDS-205ENST00000486793 CNTROBQ8N137 903 aa24.67■■□□□ 1.54
GMDS-205ENST00000486793 CNTNAP1P78357 1384 aa24.67■■□□□ 1.54
GMDS-205ENST00000486793 PPEF1O14829 653 aaPredicted RBP24.66■■□□□ 1.54
GMDS-205ENST00000486793 ANXA1P04083 346 aa24.66■■□□□ 1.54
GMDS-205ENST00000486793 PROSER3Q2NL68 480 aa24.66■■□□□ 1.54
GMDS-205ENST00000486793 PARP10Q53GL7 1025 aa24.66■■□□□ 1.54
GMDS-205ENST00000486793 LARGE2Q8N3Y3 721 aa24.66■■□□□ 1.54
GMDS-205ENST00000486793 NLRP3Q96P20 1036 aa24.66■■□□□ 1.54
GMDS-205ENST00000486793 RIC1Q4ADV7 1423 aa24.65■■□□□ 1.54
GMDS-205ENST00000486793 SLC10A5Q5PT55 438 aa24.65■■□□□ 1.54
GMDS-205ENST00000486793 UTP14AQ9BVJ6 771 aaKnown RBP24.65■■□□□ 1.54
GMDS-205ENST00000486793 BABAM1Q9NWV8 329 aa24.65■■□□□ 1.54
GMDS-205ENST00000486793 CACNA1SQ13698 1873 aa24.64■■□□□ 1.54
GMDS-205ENST00000486793 TMPOP42166 694 aaKnown RBP24.64■■□□□ 1.54
GMDS-205ENST00000486793 VEGFBP49765 207 aa24.64■■□□□ 1.54
GMDS-205ENST00000486793 RALBP1Q15311 655 aa24.64■■□□□ 1.54
GMDS-205ENST00000486793 NECTIN2Q92692 538 aa24.63■■□□□ 1.53
GMDS-205ENST00000486793 KDM3BQ7LBC6 1761 aa24.62■■□□□ 1.53
GMDS-205ENST00000486793 AIMP1Q12904 312 aaKnown RBP24.61■■□□□ 1.53
GMDS-205ENST00000486793 COPS6Q7L5N1 327 aa24.61■■□□□ 1.53
GMDS-205ENST00000486793 TMX4Q9H1E5 349 aaPredicted RBP24.61■■□□□ 1.53
GMDS-205ENST00000486793 ATP6V0A2Q9Y487 856 aa24.61■■□□□ 1.53
GMDS-205ENST00000486793 LAMB4A4D0S4 1761 aa24.6■■□□□ 1.53
GMDS-205ENST00000486793 FOXN1O15353 648 aa24.6■■□□□ 1.53
GMDS-205ENST00000486793 LMOD1P29536 600 aaPredicted RBP24.6■■□□□ 1.53
GMDS-205ENST00000486793 EPS15P42566 896 aa24.6■■□□□ 1.53
GMDS-205ENST00000486793 LMOD3Q0VAK6 560 aa24.6■■□□□ 1.53
GMDS-205ENST00000486793 COL4A5P29400 1685 aa24.59■■□□□ 1.53
GMDS-205ENST00000486793 SCN4AP35499 1836 aa24.59■■□□□ 1.53
GMDS-205ENST00000486793 SCNN1DP51172 638 aa24.59■■□□□ 1.53
GMDS-205ENST00000486793 NEUROD2Q15784 382 aa24.59■■□□□ 1.53
GMDS-205ENST00000486793 NIM1KQ8IY84 436 aa24.59■■□□□ 1.53
GMDS-205ENST00000486793 XAGE3Q8WTP9 111 aa24.59■■□□□ 1.53
GMDS-205ENST00000486793 PPIP5K2O43314 1243 aa24.58■■□□□ 1.53
GMDS-205ENST00000486793 HCLS1P14317 486 aaPredicted RBP24.58■■□□□ 1.53
GMDS-205ENST00000486793 NLRP10Q86W26 655 aa24.58■■□□□ 1.53
GMDS-205ENST00000486793 AOC3Q16853 763 aa24.57■■□□□ 1.52
GMDS-205ENST00000486793 KRT24Q2M2I5 525 aa24.57■■□□□ 1.52
GMDS-205ENST00000486793 DEFB115Q30KQ5 88 aa24.57■■□□□ 1.52
GMDS-205ENST00000486793 CCDC146Q8IYE0 955 aa24.57■■□□□ 1.52
GMDS-205ENST00000486793 ABCC4O15439 1325 aa24.57■■□□□ 1.52
GMDS-205ENST00000486793 DLG5Q8TDM6 1919 aa24.57■■□□□ 1.52
GMDS-205ENST00000486793 RASSF10A6NK89 507 aa24.56■■□□□ 1.52
GMDS-205ENST00000486793 CHL1O00533 1208 aa24.56■■□□□ 1.52
GMDS-205ENST00000486793 BBOX1O75936 387 aa24.56■■□□□ 1.52
GMDS-205ENST00000486793 HSP90AB3PQ58FF7 597 aa24.56■■□□□ 1.52
GMDS-205ENST00000486793 VPS33BQ9H267 617 aa24.56■■□□□ 1.52
GMDS-205ENST00000486793 DDX21Q9NR30 783 aaKnown RBP eCLIP24.56■■□□□ 1.52
GMDS-205ENST00000486793 TCIRG1Q13488 830 aa24.55■■□□□ 1.52
GMDS-205ENST00000486793 AIDAQ96BJ3 306 aa24.55■■□□□ 1.52
GMDS-205ENST00000486793 TRMT112Q9UI30 125 aaKnown RBP24.55■■□□□ 1.52
GMDS-205ENST00000486793 LAS1LQ9Y4W2 734 aaKnown RBP24.55■■□□□ 1.52
GMDS-205ENST00000486793 NUP98P52948 1817 aa24.55■■□□□ 1.52
GMDS-205ENST00000486793 FMR1Q06787 632 aaKnown RBP eCLIP24.54■■□□□ 1.52
GMDS-205ENST00000486793 DDX10Q13206 875 aaKnown RBP24.54■■□□□ 1.52
GMDS-205ENST00000486793 USP50Q70EL3 339 aaPredicted RBP24.54■■□□□ 1.52
GMDS-205ENST00000486793 SP8Q8IXZ3 490 aa24.54■■□□□ 1.52
GMDS-205ENST00000486793 RTFDC1Q9BY42 306 aaPredicted RBP24.54■■□□□ 1.52
GMDS-205ENST00000486793 WBP1LQ9NX94 342 aa24.54■■□□□ 1.52
GMDS-205ENST00000486793 ABT1Q9ULW3 272 aaKnown RBP24.54■■□□□ 1.52
GMDS-205ENST00000486793 CTCFP49711 727 aaPredicted RBP24.53■■□□□ 1.52
GMDS-205ENST00000486793 CXCL9Q07325 125 aa24.53■■□□□ 1.52
GMDS-205ENST00000486793 DPP8Q6V1X1 898 aaPredicted RBP24.53■■□□□ 1.52
GMDS-205ENST00000486793 SUPT20HQ8NEM7 779 aa24.53■■□□□ 1.52
GMDS-205ENST00000486793 ZNRF3Q9ULT6 936 aa24.53■■□□□ 1.52
GMDS-205ENST00000486793 TRIM35Q9UPQ4 493 aa24.53■■□□□ 1.52
GMDS-205ENST00000486793 MPNDQ8N594 471 aa24.52■■□□□ 1.52
GMDS-205ENST00000486793 ZNF428Q96B54 188 aa24.52■■□□□ 1.52
GMDS-205ENST00000486793 PRDM10Q9NQV6 1147 aa24.52■■□□□ 1.52
GMDS-205ENST00000486793 ADAMTSL1Q8N6G6 1762 aa24.52■■□□□ 1.52
GMDS-205ENST00000486793 DDX46Q7L014 1031 aaKnown RBP24.51■■□□□ 1.51
GMDS-205ENST00000486793 RUNDC1Q96C34 613 aa24.51■■□□□ 1.51
GMDS-205ENST00000486793 GPRC5DQ9NZD1 345 aa24.51■■□□□ 1.51
GMDS-205ENST00000486793 CHPF2Q9P2E5 772 aa24.51■■□□□ 1.51
GMDS-205ENST00000486793 SH3TC1Q8TE82 1336 aa24.51■■□□□ 1.51
GMDS-205ENST00000486793 WDR33Q9C0J8 1336 aaKnown RBP24.51■■□□□ 1.51
GMDS-205ENST00000486793 ADARB2Q9NS39 739 aaKnown RBP24.5■■□□□ 1.51
GMDS-205ENST00000486793 MYBBP1AQ9BQG0 1328 aaKnown RBP24.5■■□□□ 1.51
GMDS-205ENST00000486793 TRAF5O00463 557 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms