RNA–Protein interactions for RNA: ENST00000486790.2

RCC1-212, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 5

Gene RCC1, Length 481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-212ENST00000486790 TAF1DQ9H5J8 278 aaPredicted RBP34.73■■■■□ 3.15
RCC1-212ENST00000486790 HACL1Q9UJ83 578 aa34.73■■■■□ 3.15
RCC1-212ENST00000486790 HSP90AB3PQ58FF7 597 aa34.72■■■■□ 3.15
RCC1-212ENST00000486790 PNMA8AQ86V59 439 aaPredicted RBP34.72■■■■□ 3.15
RCC1-212ENST00000486790 NLRP3Q96P20 1036 aa34.72■■■■□ 3.15
RCC1-212ENST00000486790 CRAMP1Q96RY5 1269 aa34.72■■■■□ 3.15
RCC1-212ENST00000486790 MYBBP1AQ9BQG0 1328 aaKnown RBP34.72■■■■□ 3.15
RCC1-212ENST00000486790 UBN2Q6ZU65 1347 aa34.71■■■■□ 3.15
RCC1-212ENST00000486790 FZD9O00144 591 aa34.7■■■■□ 3.15
RCC1-212ENST00000486790 EIF6P56537 245 aaKnown RBP34.7■■■■□ 3.15
RCC1-212ENST00000486790 WDR43Q15061 677 aaKnown RBP eCLIP34.7■■■■□ 3.15
RCC1-212ENST00000486790 OLFM4Q6UX06 510 aa34.7■■■■□ 3.15
RCC1-212ENST00000486790 GPC2Q8N158 579 aa34.7■■■■□ 3.15
RCC1-212ENST00000486790 RNF123Q5XPI4 1314 aa34.7■■■■□ 3.15
RCC1-212ENST00000486790 UTP14AQ9BVJ6 771 aaKnown RBP34.69■■■■□ 3.14
RCC1-212ENST00000486790 NTSR2O95665 410 aa34.68■■■■□ 3.14
RCC1-212ENST00000486790 EAPPQ56P03 285 aaPredicted RBP34.68■■■■□ 3.14
RCC1-212ENST00000486790 ZNF541Q9H0D2 1346 aa34.68■■■■□ 3.14
RCC1-212ENST00000486790 CLEC11AQ9Y240 323 aa34.68■■■■□ 3.14
RCC1-212ENST00000486790 PPEF1O14829 653 aaPredicted RBP34.66■■■■□ 3.14
RCC1-212ENST00000486790 EPHX2P34913 555 aa34.66■■■■□ 3.14
RCC1-212ENST00000486790 DDX10Q13206 875 aaKnown RBP34.65■■■■□ 3.14
RCC1-212ENST00000486790 POTEIP0CG38 1075 aa34.64■■■■□ 3.14
RCC1-212ENST00000486790 POTEJP0CG39 1038 aa34.64■■■■□ 3.14
RCC1-212ENST00000486790 LMOD1P29536 600 aaPredicted RBP34.64■■■■□ 3.14
RCC1-212ENST00000486790 NEUROD2Q15784 382 aa34.64■■■■□ 3.14
RCC1-212ENST00000486790 PDIA6Q15084 440 aa34.63■■■■□ 3.13
RCC1-212ENST00000486790 LARGE2Q8N3Y3 721 aa34.63■■■■□ 3.13
RCC1-212ENST00000486790 RUNDC1Q96C34 613 aa34.63■■■■□ 3.13
RCC1-212ENST00000486790 SLC10A5Q5PT55 438 aa34.62■■■■□ 3.13
RCC1-212ENST00000486790 VPS33BQ9H267 617 aa34.62■■■■□ 3.13
RCC1-212ENST00000486790 HSPA1AP0DMV8 641 aaKnown RBP34.61■■■■□ 3.13
RCC1-212ENST00000486790 HSPA1BP0DMV9 641 aaKnown RBP34.61■■■■□ 3.13
RCC1-212ENST00000486790 COPS6Q7L5N1 327 aa34.6■■■■□ 3.13
RCC1-212ENST00000486790 LRP10Q7Z4F1 713 aa34.6■■■■□ 3.13
RCC1-212ENST00000486790 SUPT20HQ8NEM7 779 aa34.6■■■■□ 3.13
RCC1-212ENST00000486790 LAS1LQ9Y4W2 734 aaKnown RBP34.6■■■■□ 3.13
RCC1-212ENST00000486790 PASKQ96RG2 1323 aa34.59■■■■□ 3.13
RCC1-212ENST00000486790 SNED1Q8TER0 1413 aa34.59■■■■□ 3.13
RCC1-212ENST00000486790 AIMP1Q12904 312 aaKnown RBP34.59■■■■□ 3.13
RCC1-212ENST00000486790 NIM1KQ8IY84 436 aa34.59■■■■□ 3.13
RCC1-212ENST00000486790 CCDC146Q8IYE0 955 aa34.59■■■■□ 3.13
RCC1-212ENST00000486790 DDX21Q9NR30 783 aaKnown RBP eCLIP34.59■■■■□ 3.13
RCC1-212ENST00000486790 GJA3Q9Y6H8 435 aa34.59■■■■□ 3.13
RCC1-212ENST00000486790 TMEM88BA6NKF7 163 aa34.58■■■■□ 3.13
RCC1-212ENST00000486790 COL13A1Q5TAT6 717 aaPredicted RBP34.58■■■■□ 3.13
RCC1-212ENST00000486790 MKRN1Q9UHC7 482 aaKnown RBP34.58■■■■□ 3.13
RCC1-212ENST00000486790 CHL1O00533 1208 aa34.57■■■■□ 3.12
RCC1-212ENST00000486790 TCERG1O14776 1098 aaKnown RBP34.57■■■■□ 3.12
RCC1-212ENST00000486790 PROSER3Q2NL68 480 aa34.57■■■■□ 3.12
RCC1-212ENST00000486790 NECTIN2Q92692 538 aa34.57■■■■□ 3.12
RCC1-212ENST00000486790 ATP6V0A2Q9Y487 856 aa34.57■■■■□ 3.12
RCC1-212ENST00000486790 ANKRD36CQ5JPF3 1778 aa34.57■■■■□ 3.12
RCC1-212ENST00000486790 BBOX1O75936 387 aa34.56■■■■□ 3.12
RCC1-212ENST00000486790 HOXB7P09629 217 aa34.56■■■■□ 3.12
RCC1-212ENST00000486790 XAGE3Q8WTP9 111 aa34.56■■■■□ 3.12
RCC1-212ENST00000486790 ANXA1P04083 346 aa34.55■■■■□ 3.12
RCC1-212ENST00000486790 TCIRG1Q13488 830 aa34.55■■■■□ 3.12
RCC1-212ENST00000486790 PPIP5K2O43314 1243 aa34.54■■■■□ 3.12
RCC1-212ENST00000486790 DDX46Q7L014 1031 aaKnown RBP34.54■■■■□ 3.12
RCC1-212ENST00000486790 TNS4Q8IZW8 715 aa34.54■■■■□ 3.12
RCC1-212ENST00000486790 TRMT112Q9UI30 125 aaKnown RBP34.54■■■■□ 3.12
RCC1-212ENST00000486790 SH3TC1Q8TE82 1336 aa34.54■■■■□ 3.12
RCC1-212ENST00000486790 CNTNAP1P78357 1384 aa34.53■■■■□ 3.12
RCC1-212ENST00000486790 NLRP10Q86W26 655 aa34.53■■■■□ 3.12
RCC1-212ENST00000486790 CNTROBQ8N137 903 aa34.53■■■■□ 3.12
RCC1-212ENST00000486790 ITGBL1O95965 494 aaPredicted RBP34.52■■■■□ 3.12
RCC1-212ENST00000486790 HDGFL1Q5TGJ6 251 aa34.52■■■■□ 3.12
RCC1-212ENST00000486790 DBF4Q9UBU7 674 aaPredicted RBP34.51■■■■□ 3.12
RCC1-212ENST00000486790 ABCC4O15439 1325 aa34.51■■■■□ 3.11
RCC1-212ENST00000486790 C3orf67Q6ZVT6 689 aa34.5■■■■□ 3.11
RCC1-212ENST00000486790 TMC4Q7Z404 712 aa34.5■■■■□ 3.11
RCC1-212ENST00000486790 DPP8Q6V1X1 898 aaPredicted RBP34.49■■■■□ 3.11
RCC1-212ENST00000486790 SP8Q8IXZ3 490 aa34.49■■■■□ 3.11
RCC1-212ENST00000486790 TRIM35Q9UPQ4 493 aa34.49■■■■□ 3.11
RCC1-212ENST00000486790 ADAMTSL1Q8N6G6 1762 aa34.49■■■■□ 3.11
RCC1-212ENST00000486790 PLBD2Q8NHP8 589 aa34.48■■■■□ 3.11
RCC1-212ENST00000486790 AIDAQ96BJ3 306 aa34.48■■■■□ 3.11
RCC1-212ENST00000486790 CHPF2Q9P2E5 772 aa34.48■■■■□ 3.11
RCC1-212ENST00000486790 ADAMTS8Q9UP79 889 aa34.48■■■■□ 3.11
RCC1-212ENST00000486790 CALD1Q05682 793 aaKnown RBP34.47■■■■□ 3.11
RCC1-212ENST00000486790 MAP1SQ66K74 1059 aaPredicted RBP34.47■■■■□ 3.11
RCC1-212ENST00000486790 USP50Q70EL3 339 aaPredicted RBP34.47■■■■□ 3.11
RCC1-212ENST00000486790 CFAP44Q96MT7 982 aa34.47■■■■□ 3.11
RCC1-212ENST00000486790 HYPKQ9NX55 129 aa34.47■■■■□ 3.11
RCC1-212ENST00000486790 HCLS1P14317 486 aaPredicted RBP34.46■■■■□ 3.11
RCC1-212ENST00000486790 AOC3Q16853 763 aa34.46■■■■□ 3.11
RCC1-212ENST00000486790 ANKRD13DQ6ZTN6 518 aa34.46■■■■□ 3.11
RCC1-212ENST00000486790 MPNDQ8N594 471 aa34.46■■■■□ 3.11
RCC1-212ENST00000486790 RTFDC1Q9BY42 306 aaPredicted RBP34.46■■■■□ 3.11
RCC1-212ENST00000486790 GRAPQ13588 217 aa34.45■■■■□ 3.11
RCC1-212ENST00000486790 GRAPLQ8TC17 118 aaPredicted RBP34.45■■■■□ 3.11
RCC1-212ENST00000486790 ZNRF3Q9ULT6 936 aa34.45■■■■□ 3.11
RCC1-212ENST00000486790 CHMP4AQ9BY43 222 aa34.44■■■■□ 3.1
RCC1-212ENST00000486790 SCNN1DP51172 638 aa34.43■■■■□ 3.1
RCC1-212ENST00000486790 LAMB2P55268 1798 aa34.42■■■■□ 3.1
RCC1-212ENST00000486790 KRT24Q2M2I5 525 aa34.42■■■■□ 3.1
RCC1-212ENST00000486790 ABT1Q9ULW3 272 aaKnown RBP34.42■■■■□ 3.1
RCC1-212ENST00000486790 COL4A5P29400 1685 aa34.41■■■■□ 3.1
RCC1-212ENST00000486790 HSP90B1P14625 803 aaKnown RBP34.41■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms