RNA–Protein interactions for RNA: ENST00000486045.1

RHBDF1-209, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 2

Gene RHBDF1, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-209ENST00000486045 IBTKQ9P2D0 1353 aaPredicted RBP24.06■■□□□ 1.44
RHBDF1-209ENST00000486045 CAPN15O75808 1086 aa24.06■■□□□ 1.44
RHBDF1-209ENST00000486045 NTSR2O95665 410 aa24.06■■□□□ 1.44
RHBDF1-209ENST00000486045 HOXA10P31260 410 aaPredicted RBP24.06■■□□□ 1.44
RHBDF1-209ENST00000486045 EPHX2P34913 555 aa24.06■■□□□ 1.44
RHBDF1-209ENST00000486045 RIC1Q4ADV7 1423 aa24.05■■□□□ 1.44
RHBDF1-209ENST00000486045 GIGYF2Q6Y7W6 1299 aaKnown RBP24.05■■□□□ 1.44
RHBDF1-209ENST00000486045 LRP10Q7Z4F1 713 aa24.05■■□□□ 1.44
RHBDF1-209ENST00000486045 CLEC11AQ9Y240 323 aa24.05■■□□□ 1.44
RHBDF1-209ENST00000486045 ERBB4Q15303 1308 aa24.05■■□□□ 1.44
RHBDF1-209ENST00000486045 COL4A5P29400 1685 aa24.05■■□□□ 1.44
RHBDF1-209ENST00000486045 TCERG1O14776 1098 aaKnown RBP24.04■■□□□ 1.44
RHBDF1-209ENST00000486045 ITGBL1O95965 494 aaPredicted RBP24.04■■□□□ 1.44
RHBDF1-209ENST00000486045 ANXA1P04083 346 aa24.04■■□□□ 1.44
RHBDF1-209ENST00000486045 EIF2S2P20042 333 aaKnown RBP24.04■■□□□ 1.44
RHBDF1-209ENST00000486045 RIPK4P57078 832 aa24.04■■□□□ 1.44
RHBDF1-209ENST00000486045 PDIA6Q15084 440 aa24.04■■□□□ 1.44
RHBDF1-209ENST00000486045 PROSER3Q2NL68 480 aa24.04■■□□□ 1.44
RHBDF1-209ENST00000486045 CNTNAP1P78357 1384 aa24.03■■□□□ 1.44
RHBDF1-209ENST00000486045 CC2D2BQ6DHV5 1058 aa24.03■■□□□ 1.44
RHBDF1-209ENST00000486045 JDP2Q8WYK2 163 aa24.03■■□□□ 1.44
RHBDF1-209ENST00000486045 SCN4AP35499 1836 aa24.03■■□□□ 1.44
RHBDF1-209ENST00000486045 NUP98P52948 1817 aa24.03■■□□□ 1.44
RHBDF1-209ENST00000486045 GPC2Q8N158 579 aa24.02■■□□□ 1.44
RHBDF1-209ENST00000486045 RBM17Q96I25 401 aaKnown RBP24.02■■□□□ 1.44
RHBDF1-209ENST00000486045 PPEF1O14829 653 aaPredicted RBP24.01■■□□□ 1.43
RHBDF1-209ENST00000486045 MAP1SQ66K74 1059 aaPredicted RBP24.01■■□□□ 1.43
RHBDF1-209ENST00000486045 CRAMP1Q96RY5 1269 aa24.01■■□□□ 1.43
RHBDF1-209ENST00000486045 GJA3Q9Y6H8 435 aa24.01■■□□□ 1.43
RHBDF1-209ENST00000486045 TMEM88BA6NKF7 163 aa24■■□□□ 1.43
RHBDF1-209ENST00000486045 PPP1R42Q7Z4L9 355 aa24■■□□□ 1.43
RHBDF1-209ENST00000486045 NECTIN2Q92692 538 aa24■■□□□ 1.43
RHBDF1-209ENST00000486045 TMPOP42166 694 aaKnown RBP23.99■■□□□ 1.43
RHBDF1-209ENST00000486045 EIF6P56537 245 aaKnown RBP23.99■■□□□ 1.43
RHBDF1-209ENST00000486045 PARP10Q53GL7 1025 aa23.99■■□□□ 1.43
RHBDF1-209ENST00000486045 PNMA8AQ86V59 439 aaPredicted RBP23.99■■□□□ 1.43
RHBDF1-209ENST00000486045 LARGE2Q8N3Y3 721 aa23.99■■□□□ 1.43
RHBDF1-209ENST00000486045 ADAMTSL1Q8N6G6 1762 aa23.98■■□□□ 1.43
RHBDF1-209ENST00000486045 CNTROBQ8N137 903 aa23.98■■□□□ 1.43
RHBDF1-209ENST00000486045 UTP14AQ9BVJ6 771 aaKnown RBP23.98■■□□□ 1.43
RHBDF1-209ENST00000486045 VEGFBP49765 207 aa23.97■■□□□ 1.43
RHBDF1-209ENST00000486045 RALBP1Q15311 655 aa23.97■■□□□ 1.43
RHBDF1-209ENST00000486045 NLRP3Q96P20 1036 aa23.97■■□□□ 1.43
RHBDF1-209ENST00000486045 AIMP1Q12904 312 aaKnown RBP23.96■■□□□ 1.43
RHBDF1-209ENST00000486045 CCDC146Q8IYE0 955 aa23.96■■□□□ 1.43
RHBDF1-209ENST00000486045 BABAM1Q9NWV8 329 aa23.96■■□□□ 1.43
RHBDF1-209ENST00000486045 ZNF316A6NFI3 1004 aaPredicted RBP23.95■■□□□ 1.42
RHBDF1-209ENST00000486045 FOXN1O15353 648 aa23.95■■□□□ 1.42
RHBDF1-209ENST00000486045 EPS15P42566 896 aa23.95■■□□□ 1.42
RHBDF1-209ENST00000486045 SCNN1DP51172 638 aa23.95■■□□□ 1.42
RHBDF1-209ENST00000486045 NEUROD2Q15784 382 aa23.95■■□□□ 1.42
RHBDF1-209ENST00000486045 KRT24Q2M2I5 525 aa23.95■■□□□ 1.42
RHBDF1-209ENST00000486045 GRIPAP1Q4V328 841 aa23.95■■□□□ 1.42
RHBDF1-209ENST00000486045 SLC10A5Q5PT55 438 aa23.95■■□□□ 1.42
RHBDF1-209ENST00000486045 COPS6Q7L5N1 327 aa23.95■■□□□ 1.42
RHBDF1-209ENST00000486045 XAGE3Q8WTP9 111 aa23.95■■□□□ 1.42
RHBDF1-209ENST00000486045 ABCC4O15439 1325 aa23.94■■□□□ 1.42
RHBDF1-209ENST00000486045 LTBP1Q14766 1721 aa23.94■■□□□ 1.42
RHBDF1-209ENST00000486045 LMOD3Q0VAK6 560 aa23.94■■□□□ 1.42
RHBDF1-209ENST00000486045 ATP6V0A2Q9Y487 856 aa23.94■■□□□ 1.42
RHBDF1-209ENST00000486045 PPIP5K2O43314 1243 aa23.93■■□□□ 1.42
RHBDF1-209ENST00000486045 HCLS1P14317 486 aaPredicted RBP23.93■■□□□ 1.42
RHBDF1-209ENST00000486045 LMOD1P29536 600 aaPredicted RBP23.93■■□□□ 1.42
RHBDF1-209ENST00000486045 AOC3Q16853 763 aa23.93■■□□□ 1.42
RHBDF1-209ENST00000486045 NIM1KQ8IY84 436 aa23.93■■□□□ 1.42
RHBDF1-209ENST00000486045 FMR1Q06787 632 aaKnown RBP eCLIP23.92■■□□□ 1.42
RHBDF1-209ENST00000486045 NLRP10Q86W26 655 aa23.92■■□□□ 1.42
RHBDF1-209ENST00000486045 ZNF428Q96B54 188 aa23.92■■□□□ 1.42
RHBDF1-209ENST00000486045 DDX10Q13206 875 aaKnown RBP23.9■■□□□ 1.42
RHBDF1-209ENST00000486045 LAS1LQ9Y4W2 734 aaKnown RBP23.9■■□□□ 1.42
RHBDF1-209ENST00000486045 MYBBP1AQ9BQG0 1328 aaKnown RBP23.89■■□□□ 1.42
RHBDF1-209ENST00000486045 RASSF10A6NK89 507 aa23.89■■□□□ 1.41
RHBDF1-209ENST00000486045 CHL1O00533 1208 aa23.89■■□□□ 1.41
RHBDF1-209ENST00000486045 TCIRG1Q13488 830 aa23.89■■□□□ 1.41
RHBDF1-209ENST00000486045 HSP90AB3PQ58FF7 597 aa23.89■■□□□ 1.41
RHBDF1-209ENST00000486045 TMX4Q9H1E5 349 aaPredicted RBP23.89■■□□□ 1.41
RHBDF1-209ENST00000486045 DDX21Q9NR30 783 aaKnown RBP eCLIP23.89■■□□□ 1.41
RHBDF1-209ENST00000486045 TRMT112Q9UI30 125 aaKnown RBP23.89■■□□□ 1.41
RHBDF1-209ENST00000486045 TRIM35Q9UPQ4 493 aa23.89■■□□□ 1.41
RHBDF1-209ENST00000486045 DEFB115Q30KQ5 88 aa23.88■■□□□ 1.41
RHBDF1-209ENST00000486045 CHPF2Q9P2E5 772 aa23.88■■□□□ 1.41
RHBDF1-209ENST00000486045 ABT1Q9ULW3 272 aaKnown RBP23.88■■□□□ 1.41
RHBDF1-209ENST00000486045 DPP8Q6V1X1 898 aaPredicted RBP23.87■■□□□ 1.41
RHBDF1-209ENST00000486045 AIDAQ96BJ3 306 aa23.87■■□□□ 1.41
RHBDF1-209ENST00000486045 RTFDC1Q9BY42 306 aaPredicted RBP23.87■■□□□ 1.41
RHBDF1-209ENST00000486045 BBOX1O75936 387 aa23.86■■□□□ 1.41
RHBDF1-209ENST00000486045 CXCL9Q07325 125 aa23.86■■□□□ 1.41
RHBDF1-209ENST00000486045 USP50Q70EL3 339 aaPredicted RBP23.86■■□□□ 1.41
RHBDF1-209ENST00000486045 SP8Q8IXZ3 490 aa23.86■■□□□ 1.41
RHBDF1-209ENST00000486045 WBP1LQ9NX94 342 aa23.86■■□□□ 1.41
RHBDF1-209ENST00000486045 ZNRF3Q9ULT6 936 aa23.86■■□□□ 1.41
RHBDF1-209ENST00000486045 SH3TC1Q8TE82 1336 aa23.85■■□□□ 1.41
RHBDF1-209ENST00000486045 TRAF5O00463 557 aa23.85■■□□□ 1.41
RHBDF1-209ENST00000486045 CTCFP49711 727 aaPredicted RBP23.85■■□□□ 1.41
RHBDF1-209ENST00000486045 DDX46Q7L014 1031 aaKnown RBP23.85■■□□□ 1.41
RHBDF1-209ENST00000486045 SUPT20HQ8NEM7 779 aa23.85■■□□□ 1.41
RHBDF1-209ENST00000486045 RUNDC1Q96C34 613 aa23.85■■□□□ 1.41
RHBDF1-209ENST00000486045 VPS33BQ9H267 617 aa23.85■■□□□ 1.41
RHBDF1-209ENST00000486045 GPRC5DQ9NZD1 345 aa23.85■■□□□ 1.41
RHBDF1-209ENST00000486045 WDR33Q9C0J8 1336 aaKnown RBP23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms