RNA–Protein interactions for RNA: ENST00000486044.1

PDE6D-205, Transcript of phosphodiesterase 6D, humanhuman

TSL 2

Gene PDE6D, Length 1,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-205ENST00000486044 NUTM1Q86Y26 1132 aa21.44■■□□□ 1.02
PDE6D-205ENST00000486044 GJA3Q9Y6H8 435 aa21.44■■□□□ 1.02
PDE6D-205ENST00000486044 MAP3K15Q6ZN16 1313 aa21.44■■□□□ 1.02
PDE6D-205ENST00000486044 HOXA10P31260 410 aaPredicted RBP21.43■■□□□ 1.02
PDE6D-205ENST00000486044 MAP2K1Q02750 393 aaPredicted RBP21.43■■□□□ 1.02
PDE6D-205ENST00000486044 ABT1Q9ULW3 272 aaKnown RBP21.43■■□□□ 1.02
PDE6D-205ENST00000486044 RRP7AQ9Y3A4 280 aaKnown RBP21.43■■□□□ 1.02
PDE6D-205ENST00000486044 LAMB4A4D0S4 1761 aa21.42■■□□□ 1.02
PDE6D-205ENST00000486044 LBX1P52954 281 aa21.42■■□□□ 1.02
PDE6D-205ENST00000486044 TMX4Q9H1E5 349 aaPredicted RBP21.42■■□□□ 1.02
PDE6D-205ENST00000486044 ABCC12Q96J65 1359 aa21.41■■□□□ 1.02
PDE6D-205ENST00000486044 IBTKQ9P2D0 1353 aaPredicted RBP21.41■■□□□ 1.02
PDE6D-205ENST00000486044 WDR33Q9C0J8 1336 aaKnown RBP21.41■■□□□ 1.02
PDE6D-205ENST00000486044 LARGE2Q8N3Y3 721 aa21.41■■□□□ 1.02
PDE6D-205ENST00000486044 RBM17Q96I25 401 aaKnown RBP21.41■■□□□ 1.02
PDE6D-205ENST00000486044 CRAMP1Q96RY5 1269 aa21.41■■□□□ 1.02
PDE6D-205ENST00000486044 RIC1Q4ADV7 1423 aa21.4■■□□□ 1.02
PDE6D-205ENST00000486044 DDX21Q9NR30 783 aaKnown RBP eCLIP21.4■■□□□ 1.02
PDE6D-205ENST00000486044 NUP98P52948 1817 aa21.4■■□□□ 1.02
PDE6D-205ENST00000486044 SNED1Q8TER0 1413 aa21.39■■□□□ 1.02
PDE6D-205ENST00000486044 MYL6BP14649 208 aa21.39■■□□□ 1.01
PDE6D-205ENST00000486044 GPTP24298 496 aa21.39■■□□□ 1.01
PDE6D-205ENST00000486044 EIF4A1P60842 406 aaKnown RBP21.39■■□□□ 1.01
PDE6D-205ENST00000486044 TTLL7Q6ZT98 887 aa21.39■■□□□ 1.01
PDE6D-205ENST00000486044 PPEF1O14829 653 aaPredicted RBP21.38■■□□□ 1.01
PDE6D-205ENST00000486044 USP50Q70EL3 339 aaPredicted RBP21.38■■□□□ 1.01
PDE6D-205ENST00000486044 PPP1R42Q7Z4L9 355 aa21.38■■□□□ 1.01
PDE6D-205ENST00000486044 NIM1KQ8IY84 436 aa21.38■■□□□ 1.01
PDE6D-205ENST00000486044 ZBTB3Q9H5J0 574 aa21.38■■□□□ 1.01
PDE6D-205ENST00000486044 ECE1P42892 770 aa21.37■■□□□ 1.01
PDE6D-205ENST00000486044 SUSD4Q5VX71 490 aa21.37■■□□□ 1.01
PDE6D-205ENST00000486044 BEGAINQ9BUH8 593 aa21.37■■□□□ 1.01
PDE6D-205ENST00000486044 PNNQ9H307 717 aaKnown RBP21.37■■□□□ 1.01
PDE6D-205ENST00000486044 UBN2Q6ZU65 1347 aa21.36■■□□□ 1.01
PDE6D-205ENST00000486044 EPS15P42566 896 aa21.36■■□□□ 1.01
PDE6D-205ENST00000486044 SCNN1DP51172 638 aa21.36■■□□□ 1.01
PDE6D-205ENST00000486044 ZNF34Q8IZ26 560 aa21.36■■□□□ 1.01
PDE6D-205ENST00000486044 NLRP3Q96P20 1036 aa21.36■■□□□ 1.01
PDE6D-205ENST00000486044 VPS33BQ9H267 617 aa21.36■■□□□ 1.01
PDE6D-205ENST00000486044 ERBB4Q15303 1308 aa21.35■■□□□ 1.01
PDE6D-205ENST00000486044 TCERG1O14776 1098 aaKnown RBP21.35■■□□□ 1.01
PDE6D-205ENST00000486044 HSPA8P11142 646 aaKnown RBP21.35■■□□□ 1.01
PDE6D-205ENST00000486044 PARP10Q53GL7 1025 aa21.35■■□□□ 1.01
PDE6D-205ENST00000486044 GIGYF2Q6Y7W6 1299 aaKnown RBP21.35■■□□□ 1.01
PDE6D-205ENST00000486044 PAXIP1Q6ZW49 1069 aaPredicted RBP21.35■■□□□ 1.01
PDE6D-205ENST00000486044 KDM3BQ7LBC6 1761 aa21.35■■□□□ 1.01
PDE6D-205ENST00000486044 PPIP5K2O43314 1243 aa21.34■■□□□ 1.01
PDE6D-205ENST00000486044 NFE2L2Q16236 605 aa21.34■■□□□ 1.01
PDE6D-205ENST00000486044 NTSR2O95665 410 aa21.33■■□□□ 1.01
PDE6D-205ENST00000486044 SUPT20HQ8NEM7 779 aa21.33■■□□□ 1.01
PDE6D-205ENST00000486044 CAPNS2Q96L46 248 aa21.33■■□□□ 1.01
PDE6D-205ENST00000486044 DLG5Q8TDM6 1919 aa21.33■■□□□ 1
PDE6D-205ENST00000486044 COL4A5P29400 1685 aa21.32■■□□□ 1
PDE6D-205ENST00000486044 GPR101Q96P66 508 aaPredicted RBP21.32■■□□□ 1
PDE6D-205ENST00000486044 PLEKHF1Q96S99 279 aa21.32■■□□□ 1
PDE6D-205ENST00000486044 ADARB2Q9NS39 739 aaKnown RBP21.32■■□□□ 1
PDE6D-205ENST00000486044 ATP6V0A2Q9Y487 856 aa21.32■■□□□ 1
PDE6D-205ENST00000486044 MAPK8IP3Q9UPT6 1336 aa21.31■■□□□ 1
PDE6D-205ENST00000486044 ABHD8Q96I13 439 aa21.31■■□□□ 1
PDE6D-205ENST00000486044 THUMPD2Q9BTF0 503 aaKnown RBP21.31■■□□□ 1
PDE6D-205ENST00000486044 UTP14AQ9BVJ6 771 aaKnown RBP21.31■■□□□ 1
PDE6D-205ENST00000486044 GPRC5DQ9NZD1 345 aa21.31■■□□□ 1
PDE6D-205ENST00000486044 LTBP1Q14766 1721 aa21.31■■□□□ 1
PDE6D-205ENST00000486044 GRM1Q13255 1194 aa21.3■■□□□ 1
PDE6D-205ENST00000486044 AOC3Q16853 763 aa21.3■■□□□ 1
PDE6D-205ENST00000486044 SLC10A5Q5PT55 438 aa21.3■■□□□ 1
PDE6D-205ENST00000486044 ZNRF3Q9ULT6 936 aa21.3■■□□□ 1
PDE6D-205ENST00000486044 BBOX1O75936 387 aa21.29■■□□□ 1
PDE6D-205ENST00000486044 CST9Q5W186 159 aa21.29■■□□□ 1
PDE6D-205ENST00000486044 TSPYL4Q9UJ04 414 aa21.29■■□□□ 1
PDE6D-205ENST00000486044 TLL2Q9Y6L7 1015 aa21.29■■□□□ 1
PDE6D-205ENST00000486044 TRPM7Q96QT4 1865 aa21.28■■□□□ 1
PDE6D-205ENST00000486044 TRAF5O00463 557 aa21.28■■□□□ 1
PDE6D-205ENST00000486044 MAP2K2P36507 400 aa21.28■■□□□ 1
PDE6D-205ENST00000486044 FMR1Q06787 632 aaKnown RBP eCLIP21.28■■□□□ 1
PDE6D-205ENST00000486044 CYP4F22Q6NT55 531 aa21.28■■□□□ 1
PDE6D-205ENST00000486044 C3orf67Q6ZVT6 689 aa21.28■■□□□ 1
PDE6D-205ENST00000486044 EIF2S2P20042 333 aaKnown RBP21.27■■□□□ 1
PDE6D-205ENST00000486044 CXCL9Q07325 125 aa21.27■■□□□ 1
PDE6D-205ENST00000486044 HSP90AB3PQ58FF7 597 aa21.27■■□□□ 1
PDE6D-205ENST00000486044 DPP8Q6V1X1 898 aaPredicted RBP21.27■■□□□ 1
PDE6D-205ENST00000486044 RTFDC1Q9BY42 306 aaPredicted RBP21.27■■□□□ 1
PDE6D-205ENST00000486044 TNIP1Q15025 636 aa21.26■□□□□ 0.99
PDE6D-205ENST00000486044 SP8Q8IXZ3 490 aa21.26■□□□□ 0.99
PDE6D-205ENST00000486044 ABCC4O15439 1325 aa21.26■□□□□ 0.99
PDE6D-205ENST00000486044 CIAPIN1Q6FI81 312 aa21.25■□□□□ 0.99
PDE6D-205ENST00000486044 MPNDQ8N594 471 aa21.25■□□□□ 0.99
PDE6D-205ENST00000486044 BABAM1Q9NWV8 329 aa21.25■□□□□ 0.99
PDE6D-205ENST00000486044 THSD7BQ9C0I4 1608 aa21.25■□□□□ 0.99
PDE6D-205ENST00000486044 CDHR2Q9BYE9 1310 aa21.25■□□□□ 0.99
PDE6D-205ENST00000486044 CA12O43570 354 aa21.24■□□□□ 0.99
PDE6D-205ENST00000486044 GMPSP49915 693 aaPredicted RBP21.24■□□□□ 0.99
PDE6D-205ENST00000486044 SLC51AQ86UW1 340 aa21.24■□□□□ 0.99
PDE6D-205ENST00000486044 ZC3H15Q8WU90 426 aaKnown RBP21.24■□□□□ 0.99
PDE6D-205ENST00000486044 HHIPL1Q96JK4 782 aa21.24■□□□□ 0.99
PDE6D-205ENST00000486044 BCL2L13Q9BXK5 485 aa21.24■□□□□ 0.99
PDE6D-205ENST00000486044 CELF2O95319 508 aaKnown RBP21.23■□□□□ 0.99
PDE6D-205ENST00000486044 PDIA6Q15084 440 aa21.23■□□□□ 0.99
PDE6D-205ENST00000486044 DDX46Q7L014 1031 aaKnown RBP21.23■□□□□ 0.99
PDE6D-205ENST00000486044 LRP10Q7Z4F1 713 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms