RNA–Protein interactions for RNA: ENST00000486021.5

CPNE1-226, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-226ENST00000486021 DDX58O95786 925 aaKnown RBP9.67□□□□□ -0.86
CPNE1-226ENST00000486021 ZNF34Q8IZ26 560 aa9.67□□□□□ -0.86
CPNE1-226ENST00000486021 CRAMP1Q96RY5 1269 aa9.67□□□□□ -0.86
CPNE1-226ENST00000486021 NMRK2Q9NPI5 230 aa9.67□□□□□ -0.86
CPNE1-226ENST00000486021 IFT57Q9NWB7 429 aa9.67□□□□□ -0.86
CPNE1-226ENST00000486021 GOLGB1Q14789 3259 aaKnown RBP9.66□□□□□ -0.86
CPNE1-226ENST00000486021 GPTP24298 496 aa9.66□□□□□ -0.86
CPNE1-226ENST00000486021 EIF6P56537 245 aaKnown RBP9.66□□□□□ -0.86
CPNE1-226ENST00000486021 AIMP1Q12904 312 aaKnown RBP9.66□□□□□ -0.86
CPNE1-226ENST00000486021 TCIRG1Q13488 830 aa9.66□□□□□ -0.86
CPNE1-226ENST00000486021 NCBP3Q53F19 620 aaKnown RBP9.66□□□□□ -0.86
CPNE1-226ENST00000486021 CCDC30Q5VVM6 783 aa9.66□□□□□ -0.86
CPNE1-226ENST00000486021 ANKRD13DQ6ZTN6 518 aa9.66□□□□□ -0.86
CPNE1-226ENST00000486021 DDX46Q7L014 1031 aaKnown RBP9.66□□□□□ -0.86
CPNE1-226ENST00000486021 COPS6Q7L5N1 327 aa9.66□□□□□ -0.86
CPNE1-226ENST00000486021 CCDC24Q8N4L8 307 aa9.66□□□□□ -0.86
CPNE1-226ENST00000486021 PLBD2Q8NHP8 589 aa9.66□□□□□ -0.86
CPNE1-226ENST00000486021 PSMD1Q99460 953 aa9.66□□□□□ -0.86
CPNE1-226ENST00000486021 LAMB2P55268 1798 aa9.65□□□□□ -0.86
CPNE1-226ENST00000486021 ZNF316A6NFI3 1004 aaPredicted RBP9.65□□□□□ -0.86
CPNE1-226ENST00000486021 NFKBIEO00221 500 aa9.65□□□□□ -0.86
CPNE1-226ENST00000486021 BBOX1O75936 387 aa9.65□□□□□ -0.86
CPNE1-226ENST00000486021 LMOD1P29536 600 aaPredicted RBP9.65□□□□□ -0.86
CPNE1-226ENST00000486021 IARSP41252 1262 aaKnown RBP9.65□□□□□ -0.86
CPNE1-226ENST00000486021 GOLGA2Q08379 1002 aa9.65□□□□□ -0.86
CPNE1-226ENST00000486021 CRY2Q49AN0 593 aa9.65□□□□□ -0.86
CPNE1-226ENST00000486021 TTLL7Q6ZT98 887 aa9.65□□□□□ -0.86
CPNE1-226ENST00000486021 RIC3Q7Z5B4 369 aa9.65□□□□□ -0.86
CPNE1-226ENST00000486021 PNMA8AQ86V59 439 aaPredicted RBP9.65□□□□□ -0.86
CPNE1-226ENST00000486021 STK31Q9BXU1 1019 aa9.65□□□□□ -0.86
CPNE1-226ENST00000486021 TRMT112Q9UI30 125 aaKnown RBP9.65□□□□□ -0.86
CPNE1-226ENST00000486021 MYH3P11055 1940 aa9.64□□□□□ -0.87
CPNE1-226ENST00000486021 SH3TC1Q8TE82 1336 aa9.64□□□□□ -0.87
CPNE1-226ENST00000486021 APAF1O14727 1248 aa9.64□□□□□ -0.87
CPNE1-226ENST00000486021 HOXA10P31260 410 aaPredicted RBP9.64□□□□□ -0.87
CPNE1-226ENST00000486021 SLC10A5Q5PT55 438 aa9.64□□□□□ -0.87
CPNE1-226ENST00000486021 SUSD4Q5VX71 490 aa9.64□□□□□ -0.87
CPNE1-226ENST00000486021 DUSP27Q5VZP5 1158 aa9.64□□□□□ -0.87
CPNE1-226ENST00000486021 NUTM1Q86Y26 1132 aa9.64□□□□□ -0.87
CPNE1-226ENST00000486021 XAGE3Q8WTP9 111 aa9.64□□□□□ -0.87
CPNE1-226ENST00000486021 TRIM35Q9UPQ4 493 aa9.64□□□□□ -0.87
CPNE1-226ENST00000486021 PPEF1O14829 653 aaPredicted RBP9.63□□□□□ -0.87
CPNE1-226ENST00000486021 NTSR2O95665 410 aa9.63□□□□□ -0.87
CPNE1-226ENST00000486021 NEXNQ0ZGT2 675 aa9.63□□□□□ -0.87
CPNE1-226ENST00000486021 CCDC27Q2M243 656 aa9.63□□□□□ -0.87
CPNE1-226ENST00000486021 GPC2Q8N158 579 aa9.63□□□□□ -0.87
CPNE1-226ENST00000486021 SYNE4Q8N205 404 aa9.63□□□□□ -0.87
CPNE1-226ENST00000486021 NECTIN2Q92692 538 aa9.63□□□□□ -0.87
CPNE1-226ENST00000486021 DDX60Q8IY21 1712 aaKnown RBP9.62□□□□□ -0.87
CPNE1-226ENST00000486021 PDIA6Q15084 440 aa9.62□□□□□ -0.87
CPNE1-226ENST00000486021 CHADLQ6NUI6 762 aa9.62□□□□□ -0.87
CPNE1-226ENST00000486021 NIM1KQ8IY84 436 aa9.62□□□□□ -0.87
CPNE1-226ENST00000486021 LARGE2Q8N3Y3 721 aa9.62□□□□□ -0.87
CPNE1-226ENST00000486021 C7orf43Q8WVR3 580 aa9.62□□□□□ -0.87
CPNE1-226ENST00000486021 MBIPQ9NS73 344 aa9.62□□□□□ -0.87
CPNE1-226ENST00000486021 CHPF2Q9P2E5 772 aa9.62□□□□□ -0.87
CPNE1-226ENST00000486021 HACL1Q9UJ83 578 aa9.62□□□□□ -0.87
CPNE1-226ENST00000486021 UBN2Q6ZU65 1347 aa9.61□□□□□ -0.87
CPNE1-226ENST00000486021 TRIM28Q13263 835 aaKnown RBP9.61□□□□□ -0.87
CPNE1-226ENST00000486021 DPP8Q6V1X1 898 aaPredicted RBP9.61□□□□□ -0.87
CPNE1-226ENST00000486021 NLRP10Q86W26 655 aa9.61□□□□□ -0.87
CPNE1-226ENST00000486021 LDHDQ86WU2 507 aa9.61□□□□□ -0.87
CPNE1-226ENST00000486021 SP8Q8IXZ3 490 aa9.61□□□□□ -0.87
CPNE1-226ENST00000486021 MPNDQ8N594 471 aa9.61□□□□□ -0.87
CPNE1-226ENST00000486021 L3MBTL3Q96JM7 780 aaPredicted RBP9.61□□□□□ -0.87
CPNE1-226ENST00000486021 EYA3Q99504 573 aa9.61□□□□□ -0.87
CPNE1-226ENST00000486021 MRS2Q9HD23 443 aa9.61□□□□□ -0.87
CPNE1-226ENST00000486021 CLEC11AQ9Y240 323 aa9.61□□□□□ -0.87
CPNE1-226ENST00000486021 ATP6V0A2Q9Y487 856 aa9.61□□□□□ -0.87
CPNE1-226ENST00000486021 IL16Q14005 1332 aa9.6□□□□□ -0.87
CPNE1-226ENST00000486021 TRPM7Q96QT4 1865 aa9.6□□□□□ -0.87
CPNE1-226ENST00000486021 G3V3G9 751 aa9.6□□□□□ -0.87
CPNE1-226ENST00000486021 FZD9O00144 591 aa9.6□□□□□ -0.87
CPNE1-226ENST00000486021 DDNO94850 711 aaPredicted RBP9.6□□□□□ -0.87
CPNE1-226ENST00000486021 ZNF853P0CG23 659 aa9.6□□□□□ -0.87
CPNE1-226ENST00000486021 GRAPQ13588 217 aa9.6□□□□□ -0.87
CPNE1-226ENST00000486021 TNIP1Q15025 636 aa9.6□□□□□ -0.87
CPNE1-226ENST00000486021 DCAF8Q5TAQ9 597 aa9.6□□□□□ -0.87
CPNE1-226ENST00000486021 CCDC191Q8NCU4 936 aa9.6□□□□□ -0.87
CPNE1-226ENST00000486021 GRAPLQ8TC17 118 aaPredicted RBP9.6□□□□□ -0.87
CPNE1-226ENST00000486021 ZNF277Q9NRM2 450 aaPredicted RBP9.6□□□□□ -0.87
CPNE1-226ENST00000486021 PPIP5K2O43314 1243 aa9.59□□□□□ -0.87
CPNE1-226ENST00000486021 ANXA1P04083 346 aa9.59□□□□□ -0.87
CPNE1-226ENST00000486021 LRP10Q7Z4F1 713 aa9.59□□□□□ -0.87
CPNE1-226ENST00000486021 ZBTB38Q8NAP3 1195 aaPredicted RBP9.59□□□□□ -0.87
CPNE1-226ENST00000486021 KLRG1Q96E93 195 aa9.59□□□□□ -0.87
CPNE1-226ENST00000486021 ABCC12Q96J65 1359 aa9.59□□□□□ -0.87
CPNE1-226ENST00000486021 CDHR2Q9BYE9 1310 aa9.58□□□□□ -0.88
CPNE1-226ENST00000486021 EPHX2P34913 555 aa9.58□□□□□ -0.88
CPNE1-226ENST00000486021 SF3B3Q15393 1217 aaKnown RBP9.58□□□□□ -0.88
CPNE1-226ENST00000486021 PROSER3Q2NL68 480 aa9.58□□□□□ -0.88
CPNE1-226ENST00000486021 CCDC152Q4G0S7 254 aa9.58□□□□□ -0.88
CPNE1-226ENST00000486021 EAPPQ56P03 285 aaPredicted RBP9.58□□□□□ -0.88
CPNE1-226ENST00000486021 WDR63Q8IWG1 891 aa9.58□□□□□ -0.88
CPNE1-226ENST00000486021 ISCA1Q9BUE6 129 aa9.58□□□□□ -0.88
CPNE1-226ENST00000486021 CREBZFQ9NS37 354 aa9.58□□□□□ -0.88
CPNE1-226ENST00000486021 CWC25Q9NXE8 425 aaPredicted RBP9.58□□□□□ -0.88
CPNE1-226ENST00000486021 GJA3Q9Y6H8 435 aa9.58□□□□□ -0.88
CPNE1-226ENST00000486021 ABCC4O15439 1325 aa9.57□□□□□ -0.88
CPNE1-226ENST00000486021 ELL2O00472 640 aaPredicted RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms