RNA–Protein interactions for RNA: ENST00000485532.1

PRAME-212, Transcript of preferentially expressed antigen in melanoma, humanhuman

TSL 3

Gene PRAME, Length 709 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-212ENST00000485532 COL4A5P29400 1685 aa16.58■□□□□ 0.24
PRAME-212ENST00000485532 SCN4AP35499 1836 aa16.57■□□□□ 0.24
PRAME-212ENST00000485532 ERBB4Q15303 1308 aa16.57■□□□□ 0.24
PRAME-212ENST00000485532 IARSP41252 1262 aaKnown RBP16.57■□□□□ 0.24
PRAME-212ENST00000485532 CHADLQ6NUI6 762 aa16.57■□□□□ 0.24
PRAME-212ENST00000485532 RPGRQ92834 1020 aaKnown RBP16.57■□□□□ 0.24
PRAME-212ENST00000485532 IBTKQ9P2D0 1353 aaPredicted RBP16.56■□□□□ 0.24
PRAME-212ENST00000485532 AIMP1Q12904 312 aaKnown RBP16.56■□□□□ 0.24
PRAME-212ENST00000485532 ZNF428Q96B54 188 aa16.56■□□□□ 0.24
PRAME-212ENST00000485532 L3MBTL3Q96JM7 780 aaPredicted RBP16.56■□□□□ 0.24
PRAME-212ENST00000485532 TAF1DQ9H5J8 278 aaPredicted RBP16.56■□□□□ 0.24
PRAME-212ENST00000485532 TRIM35Q9UPQ4 493 aa16.56■□□□□ 0.24
PRAME-212ENST00000485532 LAS1LQ9Y4W2 734 aaKnown RBP16.56■□□□□ 0.24
PRAME-212ENST00000485532 ANKRD36CQ5JPF3 1778 aa16.56■□□□□ 0.24
PRAME-212ENST00000485532 RIC1Q4ADV7 1423 aa16.55■□□□□ 0.24
PRAME-212ENST00000485532 HOXA10P31260 410 aaPredicted RBP16.55■□□□□ 0.24
PRAME-212ENST00000485532 ADAMTS8Q9UP79 889 aa16.55■□□□□ 0.24
PRAME-212ENST00000485532 LAMB2P55268 1798 aa16.55■□□□□ 0.24
PRAME-212ENST00000485532 FZD9O00144 591 aa16.54■□□□□ 0.24
PRAME-212ENST00000485532 LMOD3Q0VAK6 560 aa16.54■□□□□ 0.24
PRAME-212ENST00000485532 COPS6Q7L5N1 327 aa16.54■□□□□ 0.24
PRAME-212ENST00000485532 PPP1R42Q7Z4L9 355 aa16.54■□□□□ 0.24
PRAME-212ENST00000485532 XAGE3Q8WTP9 111 aa16.54■□□□□ 0.24
PRAME-212ENST00000485532 BABAM1Q9NWV8 329 aa16.54■□□□□ 0.24
PRAME-212ENST00000485532 RNF123Q5XPI4 1314 aa16.53■□□□□ 0.24
PRAME-212ENST00000485532 IQCA1LA6NCM1 817 aa16.53■□□□□ 0.24
PRAME-212ENST00000485532 CHL1O00533 1208 aa16.53■□□□□ 0.24
PRAME-212ENST00000485532 WDR43Q15061 677 aaKnown RBP eCLIP16.53■□□□□ 0.248e-17■□□□□ 8.1
PRAME-212ENST00000485532 EAPPQ56P03 285 aaPredicted RBP16.53■□□□□ 0.24
PRAME-212ENST00000485532 COL13A1Q5TAT6 717 aaPredicted RBP16.53■□□□□ 0.24
PRAME-212ENST00000485532 RUNDC1Q96C34 613 aa16.53■□□□□ 0.24
PRAME-212ENST00000485532 RBM17Q96I25 401 aaKnown RBP16.53■□□□□ 0.24
PRAME-212ENST00000485532 PSMD1Q99460 953 aa16.53■□□□□ 0.24
PRAME-212ENST00000485532 TAF1P21675 1872 aa16.52■□□□□ 0.24
PRAME-212ENST00000485532 PPEF1O14829 653 aaPredicted RBP16.52■□□□□ 0.24
PRAME-212ENST00000485532 PARP10Q53GL7 1025 aa16.52■□□□□ 0.24
PRAME-212ENST00000485532 DIEXFQ68CQ4 756 aaKnown RBP16.52■□□□□ 0.24
PRAME-212ENST00000485532 LDHDQ86WU2 507 aa16.52■□□□□ 0.24
PRAME-212ENST00000485532 CRAMP1Q96RY5 1269 aa16.52■□□□□ 0.24
PRAME-212ENST00000485532 UTP14AQ9BVJ6 771 aaKnown RBP16.52■□□□□ 0.24
PRAME-212ENST00000485532 HACL1Q9UJ83 578 aa16.52■□□□□ 0.24
PRAME-212ENST00000485532 ADAMTSL1Q8N6G6 1762 aa16.51■□□□□ 0.23
PRAME-212ENST00000485532 LTBP1Q14766 1721 aa16.51■□□□□ 0.23
PRAME-212ENST00000485532 HCLS1P14317 486 aaPredicted RBP16.51■□□□□ 0.23
PRAME-212ENST00000485532 NLRP3Q96P20 1036 aa16.51■□□□□ 0.23
PRAME-212ENST00000485532 CHPF2Q9P2E5 772 aa16.51■□□□□ 0.23
PRAME-212ENST00000485532 MKRN1Q9UHC7 482 aaKnown RBP16.51■□□□□ 0.23
PRAME-212ENST00000485532 ABCC4O15439 1325 aa16.5■□□□□ 0.23
PRAME-212ENST00000485532 PASKQ96RG2 1323 aa16.5■□□□□ 0.23
PRAME-212ENST00000485532 EPHX2P34913 555 aa16.5■□□□□ 0.23
PRAME-212ENST00000485532 SLC10A5Q5PT55 438 aa16.5■□□□□ 0.23
PRAME-212ENST00000485532 NLRP10Q86W26 655 aa16.5■□□□□ 0.23
PRAME-212ENST00000485532 JDP2Q8WYK2 163 aa16.5■□□□□ 0.23
PRAME-212ENST00000485532 DDX21Q9NR30 783 aaKnown RBP eCLIP16.5■□□□□ 0.23
PRAME-212ENST00000485532 CLEC11AQ9Y240 323 aa16.5■□□□□ 0.23
PRAME-212ENST00000485532 GJA3Q9Y6H8 435 aa16.5■□□□□ 0.23
PRAME-212ENST00000485532 ITGBL1O95965 494 aaPredicted RBP16.49■□□□□ 0.23
PRAME-212ENST00000485532 HSPA1AP0DMV8 641 aaKnown RBP16.49■□□□□ 0.23
PRAME-212ENST00000485532 HSPA1BP0DMV9 641 aaKnown RBP16.49■□□□□ 0.23
PRAME-212ENST00000485532 CC2D2BQ6DHV5 1058 aa16.49■□□□□ 0.23
PRAME-212ENST00000485532 GPC2Q8N158 579 aa16.49■□□□□ 0.23
PRAME-212ENST00000485532 LARGE2Q8N3Y3 721 aa16.49■□□□□ 0.23
PRAME-212ENST00000485532 CREBZFQ9NS37 354 aa16.49■□□□□ 0.23
PRAME-212ENST00000485532 TCIRG1Q13488 830 aa16.48■□□□□ 0.23
PRAME-212ENST00000485532 AOC3Q16853 763 aa16.48■□□□□ 0.23
PRAME-212ENST00000485532 MAP1SQ66K74 1059 aaPredicted RBP16.48■□□□□ 0.23
PRAME-212ENST00000485532 PRKRIP1Q9H875 184 aaPredicted RBP16.48■□□□□ 0.23
PRAME-212ENST00000485532 EIF6P56537 245 aaKnown RBP16.47■□□□□ 0.23
PRAME-212ENST00000485532 HDGFL1Q5TGJ6 251 aa16.47■□□□□ 0.23
PRAME-212ENST00000485532 TRMT112Q9UI30 125 aaKnown RBP16.47■□□□□ 0.23
PRAME-212ENST00000485532 ATP6V0A2Q9Y487 856 aa16.47■□□□□ 0.23
PRAME-212ENST00000485532 DDX60Q8IY21 1712 aaKnown RBP16.47■□□□□ 0.23
PRAME-212ENST00000485532 PPIP5K2O43314 1243 aa16.46■□□□□ 0.23
PRAME-212ENST00000485532 EPS15P42566 896 aa16.46■□□□□ 0.23
PRAME-212ENST00000485532 HSP90AB3PQ58FF7 597 aa16.46■□□□□ 0.23
PRAME-212ENST00000485532 ATP5J2-PTCD1G3V325 749 aa16.45■□□□□ 0.22
PRAME-212ENST00000485532 SCNN1DP51172 638 aa16.45■□□□□ 0.22
PRAME-212ENST00000485532 FMR1Q06787 632 aaKnown RBP eCLIP16.45■□□□□ 0.224e-26■□□□□ 9.3
PRAME-212ENST00000485532 DUSP27Q5VZP5 1158 aa16.45■□□□□ 0.22
PRAME-212ENST00000485532 NIM1KQ8IY84 436 aa16.45■□□□□ 0.22
PRAME-212ENST00000485532 CNTROBQ8N137 903 aa16.45■□□□□ 0.22
PRAME-212ENST00000485532 MBIPQ9NS73 344 aa16.45■□□□□ 0.22
PRAME-212ENST00000485532 COL4A1P02462 1669 aa16.45■□□□□ 0.22
PRAME-212ENST00000485532 CNTNAP1P78357 1384 aa16.44■□□□□ 0.22
PRAME-212ENST00000485532 APAF1O14727 1248 aa16.44■□□□□ 0.22
PRAME-212ENST00000485532 GRIPAP1Q4V328 841 aa16.44■□□□□ 0.22
PRAME-212ENST00000485532 PNMA8AQ86V59 439 aaPredicted RBP16.44■□□□□ 0.22
PRAME-212ENST00000485532 PLBD2Q8NHP8 589 aa16.44■□□□□ 0.22
PRAME-212ENST00000485532 CFAP44Q96MT7 982 aa16.44■□□□□ 0.22
PRAME-212ENST00000485532 SH3TC1Q8TE82 1336 aa16.44■□□□□ 0.22
PRAME-212ENST00000485532 TMEM88BA6NKF7 163 aa16.43■□□□□ 0.22
PRAME-212ENST00000485532 RTL5Q5HYW3 569 aaPredicted RBP16.43■□□□□ 0.22
PRAME-212ENST00000485532 ANKRD13DQ6ZTN6 518 aa16.43■□□□□ 0.22
PRAME-212ENST00000485532 FAM89AQ96GI7 184 aa16.43■□□□□ 0.22
PRAME-212ENST00000485532 DBF4Q9UBU7 674 aaPredicted RBP16.43■□□□□ 0.22
PRAME-212ENST00000485532 ELL2O00472 640 aaPredicted RBP16.42■□□□□ 0.22
PRAME-212ENST00000485532 BBOX1O75936 387 aa16.42■□□□□ 0.22
PRAME-212ENST00000485532 HOXB7P09629 217 aa16.42■□□□□ 0.22
PRAME-212ENST00000485532 ZNF853P0CG23 659 aa16.42■□□□□ 0.22
PRAME-212ENST00000485532 LMOD1P29536 600 aaPredicted RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms