RNA–Protein interactions for RNA: ENST00000485441.5

SRRM1-213, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-213ENST00000485441 DACH1Q9UI36 760 aa8.58□□□□□ -1.04
SRRM1-213ENST00000485441 RTCBQ9Y3I0 505 aaKnown RBP8.58□□□□□ -1.04
SRRM1-213ENST00000485441 A6NHS1 94 aa8.57□□□□□ -1.04
SRRM1-213ENST00000485441 RPLP1P05386 114 aaKnown RBP8.57□□□□□ -1.04
SRRM1-213ENST00000485441 LDHBP07195 334 aaKnown RBP8.57□□□□□ -1.04
SRRM1-213ENST00000485441 THBS1P07996 1170 aa8.57□□□□□ -1.04
SRRM1-213ENST00000485441 ARSDP51689 593 aa8.57□□□□□ -1.04
SRRM1-213ENST00000485441 TYRO3Q06418 890 aa8.57□□□□□ -1.04
SRRM1-213ENST00000485441 SETDB2Q96T68 719 aa8.57□□□□□ -1.04
SRRM1-213ENST00000485441 ATP13A2Q9NQ11 1180 aa8.57□□□□□ -1.04
SRRM1-213ENST00000485441 USP20Q9Y2K6 914 aa8.57□□□□□ -1.04
SRRM1-213ENST00000485441 PRPF40AO75400 957 aaKnown RBP8.56□□□□□ -1.04
SRRM1-213ENST00000485441 PCSK2P16519 638 aa8.56□□□□□ -1.04
SRRM1-213ENST00000485441 MAPK8P45983 427 aa8.56□□□□□ -1.04
SRRM1-213ENST00000485441 TRIP4Q15650 581 aaPredicted RBP8.56□□□□□ -1.04
SRRM1-213ENST00000485441 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.56□□□□□ -1.042e-19■■■■□ 20.6
SRRM1-213ENST00000485441 SAMD5Q5TGI4 173 aa8.56□□□□□ -1.04
SRRM1-213ENST00000485441 NLRP8Q86W28 1048 aa8.56□□□□□ -1.04
SRRM1-213ENST00000485441 RUBCNLQ9H714 662 aa8.56□□□□□ -1.04
SRRM1-213ENST00000485441 RECKO95980 971 aa8.55□□□□□ -1.04
SRRM1-213ENST00000485441 ORC1Q13415 861 aa8.55□□□□□ -1.04
SRRM1-213ENST00000485441 UBAP2LQ14157 1087 aaKnown RBP8.55□□□□□ -1.04
SRRM1-213ENST00000485441 C8orf34Q49A92 452 aa8.55□□□□□ -1.04
SRRM1-213ENST00000485441 CSRNP1Q96S65 589 aa8.55□□□□□ -1.04
SRRM1-213ENST00000485441 GPAMQ9HCL2 828 aa8.55□□□□□ -1.04
SRRM1-213ENST00000485441 C11orf16Q9NQ32 467 aa8.55□□□□□ -1.04
SRRM1-213ENST00000485441 PARP2Q9UGN5 583 aa8.55□□□□□ -1.04
SRRM1-213ENST00000485441 SLC35F4A4IF30 521 aa8.54□□□□□ -1.04
SRRM1-213ENST00000485441 ST8SIA5O15466 376 aa8.54□□□□□ -1.04
SRRM1-213ENST00000485441 EGFRP00533 1210 aa8.54□□□□□ -1.04
SRRM1-213ENST00000485441 DUSP9Q99956 384 aaKnown RBP8.54□□□□□ -1.04
SRRM1-213ENST00000485441 ZCCHC2Q9C0B9 1178 aaKnown RBP8.54□□□□□ -1.04
SRRM1-213ENST00000485441 DNAJC25Q9H1X3 360 aa8.54□□□□□ -1.04
SRRM1-213ENST00000485441 NEUROD4Q9HD90 331 aa8.54□□□□□ -1.04
SRRM1-213ENST00000485441 EIF1AYO14602 144 aaKnown RBP8.53□□□□□ -1.04
SRRM1-213ENST00000485441 KCNQ4P56696 695 aa8.53□□□□□ -1.04
SRRM1-213ENST00000485441 DAB2P98082 770 aa8.53□□□□□ -1.04
SRRM1-213ENST00000485441 FGD1P98174 961 aa8.53□□□□□ -1.04
SRRM1-213ENST00000485441 PDE12Q6L8Q7 609 aaKnown RBP8.53□□□□□ -1.04
SRRM1-213ENST00000485441 TMC4Q7Z404 712 aa8.53□□□□□ -1.04
SRRM1-213ENST00000485441 CMTR1Q8N1G2 835 aaKnown RBP8.53□□□□□ -1.04
SRRM1-213ENST00000485441 HCN2Q9UL51 889 aa8.53□□□□□ -1.04
SRRM1-213ENST00000485441 PNMA6FA0A0J9YX94 578 aa8.52□□□□□ -1.05
SRRM1-213ENST00000485441 SOBPA7XYQ1 873 aa8.52□□□□□ -1.05
SRRM1-213ENST00000485441 TNFRSF21O75509 655 aa8.52□□□□□ -1.05
SRRM1-213ENST00000485441 LBRQ14739 615 aaKnown RBP8.52□□□□□ -1.05
SRRM1-213ENST00000485441 LAPTM4AQ15012 233 aa8.52□□□□□ -1.05
SRRM1-213ENST00000485441 ALG1LQ6GMV1 187 aa8.52□□□□□ -1.05
SRRM1-213ENST00000485441 CEP63Q96MT8 703 aa8.52□□□□□ -1.05
SRRM1-213ENST00000485441 GAS2L1Q99501 681 aaPredicted RBP8.52□□□□□ -1.05
SRRM1-213ENST00000485441 BACH2Q9BYV9 841 aa8.52□□□□□ -1.05
SRRM1-213ENST00000485441 EFSO43281 561 aa8.51□□□□□ -1.05
SRRM1-213ENST00000485441 MAN1A2O60476 641 aa8.51□□□□□ -1.05
SRRM1-213ENST00000485441 PTSQ03393 145 aa8.51□□□□□ -1.05
SRRM1-213ENST00000485441 FAM161BQ96MY7 647 aa8.51□□□□□ -1.05
SRRM1-213ENST00000485441 ELP3Q9H9T3 547 aa8.51□□□□□ -1.05
SRRM1-213ENST00000485441 ZFYVE28Q9HCC9 887 aa8.51□□□□□ -1.05
SRRM1-213ENST00000485441 FOXD3Q9UJU5 478 aaPredicted RBP8.51□□□□□ -1.05
SRRM1-213ENST00000485441 FNDC3AQ9Y2H6 1198 aaKnown RBP8.51□□□□□ -1.05
SRRM1-213ENST00000485441 UBAP1LF5GYI3 381 aa8.5□□□□□ -1.05
SRRM1-213ENST00000485441 NEFLP07196 543 aa8.5□□□□□ -1.05
SRRM1-213ENST00000485441 USPL1Q5W0Q7 1092 aa8.5□□□□□ -1.05
SRRM1-213ENST00000485441 FBF1Q8TES7 1133 aa8.5□□□□□ -1.05
SRRM1-213ENST00000485441 NDFIP2Q9NV92 336 aa8.5□□□□□ -1.05
SRRM1-213ENST00000485441 TMEM63CQ9P1W3 806 aa8.5□□□□□ -1.05
SRRM1-213ENST00000485441 CPNE3O75131 537 aaKnown RBP8.49□□□□□ -1.05
SRRM1-213ENST00000485441 FAM157BP0CG42 384 aa8.49□□□□□ -1.05
SRRM1-213ENST00000485441 SFSWAPQ12872 951 aaKnown RBP8.49□□□□□ -1.05
SRRM1-213ENST00000485441 DBN1Q16643 649 aa8.49□□□□□ -1.05
SRRM1-213ENST00000485441 PGBD3Q8N328 593 aa8.49□□□□□ -1.05
SRRM1-213ENST00000485441 CHRDQ9H2X0 955 aa8.49□□□□□ -1.05
SRRM1-213ENST00000485441 BRD7Q9NPI1 651 aa8.49□□□□□ -1.05
SRRM1-213ENST00000485441 CUEDC1Q9NWM3 386 aaPredicted RBP8.49□□□□□ -1.05
SRRM1-213ENST00000485441 GJA3Q9Y6H8 435 aa8.49□□□□□ -1.05
SRRM1-213ENST00000485441 XYLBO75191 536 aa8.48□□□□□ -1.05
SRRM1-213ENST00000485441 TCF3P15923 654 aa8.48□□□□□ -1.05
SRRM1-213ENST00000485441 GNA15P30679 374 aa8.48□□□□□ -1.05
SRRM1-213ENST00000485441 ATP2B2Q01814 1243 aa8.48□□□□□ -1.05
SRRM1-213ENST00000485441 XPCQ01831 940 aaPredicted RBP8.48□□□□□ -1.05
SRRM1-213ENST00000485441 TNP2Q05952 138 aa8.48□□□□□ -1.05
SRRM1-213ENST00000485441 EFHC2Q5JST6 749 aa8.48□□□□□ -1.05
SRRM1-213ENST00000485441 ZNF438Q7Z4V0 828 aa8.48□□□□□ -1.05
SRRM1-213ENST00000485441 TTC16Q8NEE8 873 aa8.48□□□□□ -1.05
SRRM1-213ENST00000485441 CNTN3Q9P232 1028 aa8.48□□□□□ -1.05
SRRM1-213ENST00000485441 PCDHGC4Q9Y5F7 938 aa8.48□□□□□ -1.05
SRRM1-213ENST00000485441 EPB42P16452 691 aa8.47□□□□□ -1.05
SRRM1-213ENST00000485441 SNX29Q8TEQ0 813 aa8.47□□□□□ -1.05
SRRM1-213ENST00000485441 GSX2Q9BZM3 304 aa8.47□□□□□ -1.05
SRRM1-213ENST00000485441 KCNH4Q9UQ05 1017 aa8.47□□□□□ -1.05
SRRM1-213ENST00000485441 AK5Q9Y6K8 562 aa8.47□□□□□ -1.05
SRRM1-213ENST00000485441 ATXN7O15265 892 aaPredicted RBP8.46□□□□□ -1.06
SRRM1-213ENST00000485441 BNIP3LO60238 219 aa8.46□□□□□ -1.06
SRRM1-213ENST00000485441 FIGNL1Q6PIW4 674 aa8.46□□□□□ -1.06
SRRM1-213ENST00000485441 NLRP13Q86W25 1043 aa8.46□□□□□ -1.06
SRRM1-213ENST00000485441 TRIM22Q8IYM9 498 aa8.46□□□□□ -1.06
SRRM1-213ENST00000485441 CCDC155Q8N6L0 562 aa8.46□□□□□ -1.06
SRRM1-213ENST00000485441 C1orf127Q8N9H9 656 aa8.46□□□□□ -1.06
SRRM1-213ENST00000485441 CCDC74AQ96AQ1 378 aa8.46□□□□□ -1.06
SRRM1-213ENST00000485441 FRMD6Q96NE9 622 aa8.46□□□□□ -1.06
SRRM1-213ENST00000485441 STRN4Q9NRL3 753 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms