RNA–Protein interactions for RNA: ENST00000485303.5

NECTIN3-206, Transcript of nectin cell adhesion molecule 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NECTIN3, Length 3,664 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-206ENST00000485303 MSH5O43196 834 aa22.77■■□□□ 1.24
NECTIN3-206ENST00000485303 TBC1D9Q6ZT07 1266 aa22.77■■□□□ 1.24
NECTIN3-206ENST00000485303 KRT27Q7Z3Y8 459 aa22.77■■□□□ 1.24
NECTIN3-206ENST00000485303 GPATCH3Q96I76 525 aa22.77■■□□□ 1.24
NECTIN3-206ENST00000485303 IPO9Q96P70 1041 aaKnown RBP22.76■■□□□ 1.23
NECTIN3-206ENST00000485303 TOGARAM1Q9Y4F4 1720 aa22.75■■□□□ 1.23
NECTIN3-206ENST00000485303 HCLS1P14317 486 aaPredicted RBP22.75■■□□□ 1.23
NECTIN3-206ENST00000485303 LINC00116Q8NCU8 138 aa22.75■■□□□ 1.23
NECTIN3-206ENST00000485303 PRKCSHP14314 528 aaPredicted RBP22.74■■□□□ 1.23
NECTIN3-206ENST00000485303 INTS5Q6P9B9 1019 aaKnown RBP22.74■■□□□ 1.23
NECTIN3-206ENST00000485303 C22orf23Q9BZE7 217 aa22.74■■□□□ 1.23
NECTIN3-206ENST00000485303 IRS4O14654 1257 aaPredicted RBP22.74■■□□□ 1.23
NECTIN3-206ENST00000485303 GORABQ5T7V8 394 aa22.73■■□□□ 1.23
NECTIN3-206ENST00000485303 SHANK3Q9BYB0 1731 aa22.73■■□□□ 1.23
NECTIN3-206ENST00000485303 AK7Q96M32 723 aa22.73■■□□□ 1.23
NECTIN3-206ENST00000485303 H7C1W4 665 aa22.73■■□□□ 1.23
NECTIN3-206ENST00000485303 ZPR1O75312 459 aa22.73■■□□□ 1.23
NECTIN3-206ENST00000485303 NLRP10Q86W26 655 aa22.73■■□□□ 1.23
NECTIN3-206ENST00000485303 CCDC24Q8N4L8 307 aa22.73■■□□□ 1.23
NECTIN3-206ENST00000485303 DDRGK1Q96HY6 314 aa22.73■■□□□ 1.23
NECTIN3-206ENST00000485303 TFCP2Q12800 502 aa22.72■■□□□ 1.23
NECTIN3-206ENST00000485303 SPRYD3Q8NCJ5 442 aa22.72■■□□□ 1.23
NECTIN3-206ENST00000485303 ZNF652Q9Y2D9 606 aa22.72■■□□□ 1.23
NECTIN3-206ENST00000485303 NRAPQ86VF7 1730 aa22.72■■□□□ 1.23
NECTIN3-206ENST00000485303 DOT1LQ8TEK3 1739 aa22.71■■□□□ 1.23
NECTIN3-206ENST00000485303 EIF5P55010 431 aaKnown RBP22.71■■□□□ 1.23
NECTIN3-206ENST00000485303 IFIT5Q13325 482 aaKnown RBP22.71■■□□□ 1.23
NECTIN3-206ENST00000485303 ISCA1Q9BUE6 129 aa22.71■■□□□ 1.23
NECTIN3-206ENST00000485303 RTCBQ9Y3I0 505 aaKnown RBP22.71■■□□□ 1.23
NECTIN3-206ENST00000485303 MTX1Q13505 466 aa22.71■■□□□ 1.23
NECTIN3-206ENST00000485303 BOLA2Q9H3K6 86 aa22.71■■□□□ 1.23
NECTIN3-206ENST00000485303 CNNM1Q9NRU3 951 aa22.71■■□□□ 1.23
NECTIN3-206ENST00000485303 SRP68Q9UHB9 627 aaKnown RBP22.7■■□□□ 1.22
NECTIN3-206ENST00000485303 NOP58Q9Y2X3 529 aaKnown RBP22.7■■□□□ 1.22
NECTIN3-206ENST00000485303 ITGB4P16144 1822 aa22.69■■□□□ 1.22
NECTIN3-206ENST00000485303 ZNF772Q68DY9 489 aaPredicted RBP22.69■■□□□ 1.22
NECTIN3-206ENST00000485303 ZBTB38Q8NAP3 1195 aaPredicted RBP22.69■■□□□ 1.22
NECTIN3-206ENST00000485303 ERC2O15083 957 aa22.69■■□□□ 1.22
NECTIN3-206ENST00000485303 NWD2Q9ULI1 1742 aa22.69■■□□□ 1.22
NECTIN3-206ENST00000485303 SASH1O94885 1247 aa22.69■■□□□ 1.22
NECTIN3-206ENST00000485303 UTYO14607 1347 aa22.68■■□□□ 1.22
NECTIN3-206ENST00000485303 PTPN12Q05209 780 aaKnown RBP22.68■■□□□ 1.22
NECTIN3-206ENST00000485303 EAF2Q96CJ1 260 aaPredicted RBP22.68■■□□□ 1.22
NECTIN3-206ENST00000485303 DNAJC2Q99543 621 aaKnown RBP22.68■■□□□ 1.22
NECTIN3-206ENST00000485303 PCCAP05165 728 aaPredicted RBP22.68■■□□□ 1.22
NECTIN3-206ENST00000485303 RFC4P35249 363 aa22.68■■□□□ 1.22
NECTIN3-206ENST00000485303 LRRC24Q50LG9 513 aa22.68■■□□□ 1.22
NECTIN3-206ENST00000485303 FAM196AQ6ZSG2 479 aa22.68■■□□□ 1.22
NECTIN3-206ENST00000485303 UTP14AQ9BVJ6 771 aaKnown RBP22.68■■□□□ 1.22
NECTIN3-206ENST00000485303 PUS3Q9BZE2 481 aaKnown RBP22.68■■□□□ 1.22
NECTIN3-206ENST00000485303 TLR7Q9NYK1 1049 aaKnown RBP22.68■■□□□ 1.22
NECTIN3-206ENST00000485303 USPL1Q5W0Q7 1092 aa22.67■■□□□ 1.22
NECTIN3-206ENST00000485303 FOXO4P98177 505 aa22.67■■□□□ 1.22
NECTIN3-206ENST00000485303 ANO2Q9NQ90 1003 aa22.67■■□□□ 1.22
NECTIN3-206ENST00000485303 CEP126Q9P2H0 1117 aa22.67■■□□□ 1.22
NECTIN3-206ENST00000485303 COL15A1P39059 1388 aa22.67■■□□□ 1.22
NECTIN3-206ENST00000485303 LDHAL6AQ6ZMR3 332 aa22.67■■□□□ 1.22
NECTIN3-206ENST00000485303 ECHDC1Q9NTX5 307 aa22.67■■□□□ 1.22
NECTIN3-206ENST00000485303 RBM6P78332 1123 aaKnown RBP22.66■■□□□ 1.22
NECTIN3-206ENST00000485303 SUSD4Q5VX71 490 aa22.66■■□□□ 1.22
NECTIN3-206ENST00000485303 TIMM10P62072 90 aa22.66■■□□□ 1.22
NECTIN3-206ENST00000485303 NDUFB9Q9Y6M9 179 aa22.66■■□□□ 1.22
NECTIN3-206ENST00000485303 RXRBP28702 533 aa22.65■■□□□ 1.22
NECTIN3-206ENST00000485303 CNTROBQ8N137 903 aa22.65■■□□□ 1.22
NECTIN3-206ENST00000485303 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.65■■□□□ 1.22
NECTIN3-206ENST00000485303 SH3TC1Q8TE82 1336 aa22.65■■□□□ 1.22
NECTIN3-206ENST00000485303 GREM2Q9H772 168 aa22.65■■□□□ 1.22
NECTIN3-206ENST00000485303 ERVV-1B6SEH8 477 aa22.64■■□□□ 1.22
NECTIN3-206ENST00000485303 ITGA6P23229 1130 aa22.64■■□□□ 1.22
NECTIN3-206ENST00000485303 METTL24Q5JXM2 366 aa22.64■■□□□ 1.22
NECTIN3-206ENST00000485303 DIAPH3Q9NSV4 1193 aa22.64■■□□□ 1.22
NECTIN3-206ENST00000485303 ANKRD18BA2A2Z9 1011 aa22.64■■□□□ 1.22
NECTIN3-206ENST00000485303 GLRX3O76003 335 aaKnown RBP22.64■■□□□ 1.22
NECTIN3-206ENST00000485303 CASP7P55210 303 aa22.64■■□□□ 1.22
NECTIN3-206ENST00000485303 ANP32EQ9BTT0 268 aa22.64■■□□□ 1.22
NECTIN3-206ENST00000485303 COPRSQ9NQ92 184 aa22.64■■□□□ 1.21
NECTIN3-206ENST00000485303 UBN2Q6ZU65 1347 aa22.63■■□□□ 1.21
NECTIN3-206ENST00000485303 HELBQ8NG08 1087 aaPredicted RBP22.63■■□□□ 1.21
NECTIN3-206ENST00000485303 CAMTA2O94983 1202 aa22.63■■□□□ 1.21
NECTIN3-206ENST00000485303 BECN1Q14457 450 aa22.63■■□□□ 1.21
NECTIN3-206ENST00000485303 APBA3O96018 575 aa22.62■■□□□ 1.21
NECTIN3-206ENST00000485303 MPHOSPH8Q99549 860 aa22.62■■□□□ 1.21
NECTIN3-206ENST00000485303 DBNDD2Q9BQY9 259 aa22.62■■□□□ 1.21
NECTIN3-206ENST00000485303 FSD1Q9BTV5 496 aa22.62■■□□□ 1.21
NECTIN3-206ENST00000485303 CWC27Q6UX04 472 aaKnown RBP22.62■■□□□ 1.21
NECTIN3-206ENST00000485303 SETDB2Q96T68 719 aa22.62■■□□□ 1.21
NECTIN3-206ENST00000485303 RABL6Q3YEC7 729 aaPredicted RBP22.62■■□□□ 1.21
NECTIN3-206ENST00000485303 TRAPPC3LQ5T215 181 aa22.62■■□□□ 1.21
NECTIN3-206ENST00000485303 NBPF5PQ86XG9 351 aaPredicted RBP22.62■■□□□ 1.21
NECTIN3-206ENST00000485303 BCL11BQ9C0K0 894 aaPredicted RBP22.62■■□□□ 1.21
NECTIN3-206ENST00000485303 EYA2O00167 538 aa22.61■■□□□ 1.21
NECTIN3-206ENST00000485303 CTSWP56202 376 aa22.61■■□□□ 1.21
NECTIN3-206ENST00000485303 TNNI3KQ59H18 835 aa22.61■■□□□ 1.21
NECTIN3-206ENST00000485303 TBC1D32Q96NH3 1257 aa22.61■■□□□ 1.21
NECTIN3-206ENST00000485303 FPGT-TNNI3KV9GXZ4 949 aa22.61■■□□□ 1.21
NECTIN3-206ENST00000485303 PDE8AO60658 829 aa22.61■■□□□ 1.21
NECTIN3-206ENST00000485303 HSP90AA1P07900 732 aaKnown RBP22.61■■□□□ 1.21
NECTIN3-206ENST00000485303 TRIM28Q13263 835 aaKnown RBP22.61■■□□□ 1.21
NECTIN3-206ENST00000485303 IL15P40933 162 aaPredicted RBP22.6■■□□□ 1.21
NECTIN3-206ENST00000485303 KCNJ4P48050 445 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 124.8 ms