RNA–Protein interactions for RNA: ENST00000484555.1

PABPC4-215, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 450 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-215ENST00000484555 LMOD1P29536 600 aaPredicted RBP16.6■□□□□ 0.25
PABPC4-215ENST00000484555 SCNN1DP51172 638 aa16.6■□□□□ 0.25
PABPC4-215ENST00000484555 TAF7Q15545 349 aaPredicted RBP16.6■□□□□ 0.25
PABPC4-215ENST00000484555 USP50Q70EL3 339 aaPredicted RBP16.6■□□□□ 0.25
PABPC4-215ENST00000484555 ECE1P42892 770 aa16.59■□□□□ 0.25
PABPC4-215ENST00000484555 CAPNS2Q96L46 248 aa16.59■□□□□ 0.25
PABPC4-215ENST00000484555 GJA3Q9Y6H8 435 aa16.59■□□□□ 0.25
PABPC4-215ENST00000484555 ABCC12Q96J65 1359 aa16.59■□□□□ 0.25
PABPC4-215ENST00000484555 IBTKQ9P2D0 1353 aaPredicted RBP16.59■□□□□ 0.25
PABPC4-215ENST00000484555 EPS15P42566 896 aa16.58■□□□□ 0.24
PABPC4-215ENST00000484555 RGS19P49795 217 aa16.58■□□□□ 0.24
PABPC4-215ENST00000484555 DCTN1Q14203 1278 aa16.58■□□□□ 0.24
PABPC4-215ENST00000484555 CST9Q5W186 159 aa16.58■□□□□ 0.24
PABPC4-215ENST00000484555 CRAMP1Q96RY5 1269 aa16.58■□□□□ 0.24
PABPC4-215ENST00000484555 LAMB4A4D0S4 1761 aa16.58■□□□□ 0.24
PABPC4-215ENST00000484555 NUP98P52948 1817 aa16.57■□□□□ 0.24
PABPC4-215ENST00000484555 MAP3K15Q6ZN16 1313 aa16.57■□□□□ 0.24
PABPC4-215ENST00000484555 U2AF1L5P0DN76 240 aaPredicted RBP16.57■□□□□ 0.24
PABPC4-215ENST00000484555 U2AF1Q01081 240 aaKnown RBP eCLIP16.57■□□□□ 0.245e-6■□□□□ 8
PABPC4-215ENST00000484555 CNGB1Q14028 1251 aaPredicted RBP16.57■□□□□ 0.24
PABPC4-215ENST00000484555 NUTM1Q86Y26 1132 aa16.57■□□□□ 0.24
PABPC4-215ENST00000484555 LARGE2Q8N3Y3 721 aa16.57■□□□□ 0.24
PABPC4-215ENST00000484555 CCER1Q8TC90 406 aaPredicted RBP16.57■□□□□ 0.24
PABPC4-215ENST00000484555 RPGRQ92834 1020 aaKnown RBP16.57■□□□□ 0.24
PABPC4-215ENST00000484555 GPR101Q96P66 508 aaPredicted RBP16.57■□□□□ 0.24
PABPC4-215ENST00000484555 VPS33BQ9H267 617 aa16.57■□□□□ 0.24
PABPC4-215ENST00000484555 TRPM7Q96QT4 1865 aa16.56■□□□□ 0.24
PABPC4-215ENST00000484555 MAP2K2P36507 400 aa16.56■□□□□ 0.24
PABPC4-215ENST00000484555 FMR1Q06787 632 aaKnown RBP eCLIP16.56■□□□□ 0.246e-7■□□□□ 10.3
PABPC4-215ENST00000484555 FAM161AQ3B820 660 aa16.56■□□□□ 0.24
PABPC4-215ENST00000484555 BEGAINQ9BUH8 593 aa16.56■□□□□ 0.24
PABPC4-215ENST00000484555 TLL2Q9Y6L7 1015 aa16.56■□□□□ 0.24
PABPC4-215ENST00000484555 CYP4F22Q6NT55 531 aa16.55■□□□□ 0.24
PABPC4-215ENST00000484555 PNISRQ8TF01 805 aaKnown RBP16.55■□□□□ 0.24
PABPC4-215ENST00000484555 RBM17Q96I25 401 aaKnown RBP16.55■□□□□ 0.24
PABPC4-215ENST00000484555 UBN2Q6ZU65 1347 aa16.54■□□□□ 0.24
PABPC4-215ENST00000484555 SUSD4Q5VX71 490 aa16.54■□□□□ 0.24
PABPC4-215ENST00000484555 TTLL7Q6ZT98 887 aa16.54■□□□□ 0.24
PABPC4-215ENST00000484555 NIM1KQ8IY84 436 aa16.54■□□□□ 0.24
PABPC4-215ENST00000484555 ZNF34Q8IZ26 560 aa16.54■□□□□ 0.24
PABPC4-215ENST00000484555 ADARB2Q9NS39 739 aaKnown RBP16.54■□□□□ 0.24
PABPC4-215ENST00000484555 MIS18AQ9NYP9 233 aa16.54■□□□□ 0.24
PABPC4-215ENST00000484555 TRAF5O00463 557 aa16.53■□□□□ 0.24
PABPC4-215ENST00000484555 PPEF1O14829 653 aaPredicted RBP16.53■□□□□ 0.24
PABPC4-215ENST00000484555 NTSR2O95665 410 aa16.53■□□□□ 0.24
PABPC4-215ENST00000484555 KIF6Q6ZMV9 814 aa16.53■□□□□ 0.24
PABPC4-215ENST00000484555 HHIPL1Q96JK4 782 aa16.53■□□□□ 0.24
PABPC4-215ENST00000484555 GPRC5DQ9NZD1 345 aa16.53■□□□□ 0.24
PABPC4-215ENST00000484555 PGAP2Q9UHJ9 254 aa16.53■□□□□ 0.24
PABPC4-215ENST00000484555 KDM3BQ7LBC6 1761 aa16.53■□□□□ 0.24
PABPC4-215ENST00000484555 PPP2R1AP30153 589 aa16.52■□□□□ 0.24
PABPC4-215ENST00000484555 EIF4A1P60842 406 aaKnown RBP16.52■□□□□ 0.24
PABPC4-215ENST00000484555 MLLT1Q03111 559 aaPredicted RBP16.52■□□□□ 0.24
PABPC4-215ENST00000484555 NGEFQ8N5V2 710 aa16.52■□□□□ 0.24
PABPC4-215ENST00000484555 CCDC85CA6NKD9 419 aa16.51■□□□□ 0.23
PABPC4-215ENST00000484555 PPIP5K2O43314 1243 aa16.51■□□□□ 0.23
PABPC4-215ENST00000484555 CA12O43570 354 aa16.51■□□□□ 0.23
PABPC4-215ENST00000484555 SLC10A5Q5PT55 438 aa16.51■□□□□ 0.23
PABPC4-215ENST00000484555 GIGYF2Q6Y7W6 1299 aaKnown RBP16.51■□□□□ 0.23
PABPC4-215ENST00000484555 PAXIP1Q6ZW49 1069 aaPredicted RBP16.51■□□□□ 0.23
PABPC4-215ENST00000484555 SAPCD2Q86UD0 394 aa16.51■□□□□ 0.23
PABPC4-215ENST00000484555 RTFDC1Q9BY42 306 aaPredicted RBP16.51■□□□□ 0.23
PABPC4-215ENST00000484555 RRP7AQ9Y3A4 280 aaKnown RBP16.51■□□□□ 0.23
PABPC4-215ENST00000484555 ATP6V0A2Q9Y487 856 aa16.51■□□□□ 0.23
PABPC4-215ENST00000484555 ERBB4Q15303 1308 aa16.5■□□□□ 0.23
PABPC4-215ENST00000484555 GPTP24298 496 aa16.5■□□□□ 0.23
PABPC4-215ENST00000484555 CXCL9Q07325 125 aa16.5■□□□□ 0.23
PABPC4-215ENST00000484555 PARP10Q53GL7 1025 aa16.5■□□□□ 0.23
PABPC4-215ENST00000484555 PPP1R42Q7Z4L9 355 aa16.5■□□□□ 0.23
PABPC4-215ENST00000484555 NLRP3Q96P20 1036 aa16.5■□□□□ 0.23
PABPC4-215ENST00000484555 ZNRF3Q9ULT6 936 aa16.5■□□□□ 0.23
PABPC4-215ENST00000484555 CDHR2Q9BYE9 1310 aa16.49■□□□□ 0.23
PABPC4-215ENST00000484555 AOC2O75106 756 aa16.49■□□□□ 0.23
PABPC4-215ENST00000484555 AOC3Q16853 763 aa16.49■□□□□ 0.23
PABPC4-215ENST00000484555 C3orf67Q6ZVT6 689 aa16.49■□□□□ 0.23
PABPC4-215ENST00000484555 SLC51AQ86UW1 340 aa16.49■□□□□ 0.23
PABPC4-215ENST00000484555 SUPT20HQ8NEM7 779 aa16.49■□□□□ 0.23
PABPC4-215ENST00000484555 ZC3H15Q8WU90 426 aaKnown RBP16.49■□□□□ 0.23
PABPC4-215ENST00000484555 TMX4Q9H1E5 349 aaPredicted RBP16.49■□□□□ 0.23
PABPC4-215ENST00000484555 ZBTB3Q9H5J0 574 aa16.49■□□□□ 0.23
PABPC4-215ENST00000484555 TCERG1O14776 1098 aaKnown RBP16.48■□□□□ 0.23
PABPC4-215ENST00000484555 CELF2O95319 508 aaKnown RBP16.48■□□□□ 0.23
PABPC4-215ENST00000484555 MYL6BP14649 208 aa16.48■□□□□ 0.23
PABPC4-215ENST00000484555 BRPF1P55201 1214 aaPredicted RBP16.48■□□□□ 0.23
PABPC4-215ENST00000484555 GRM1Q13255 1194 aa16.48■□□□□ 0.23
PABPC4-215ENST00000484555 DLG5Q8TDM6 1919 aa16.47■□□□□ 0.23
PABPC4-215ENST00000484555 BBOX1O75936 387 aa16.47■□□□□ 0.23
PABPC4-215ENST00000484555 GMPSP49915 693 aaPredicted RBP16.46■□□□□ 0.23
PABPC4-215ENST00000484555 CIAPIN1Q6FI81 312 aa16.46■□□□□ 0.23
PABPC4-215ENST00000484555 LRP10Q7Z4F1 713 aa16.46■□□□□ 0.23
PABPC4-215ENST00000484555 SP8Q8IXZ3 490 aa16.46■□□□□ 0.23
PABPC4-215ENST00000484555 PLEKHF1Q96S99 279 aa16.46■□□□□ 0.23
PABPC4-215ENST00000484555 MCOLN1Q9GZU1 580 aa16.46■□□□□ 0.23
PABPC4-215ENST00000484555 TSKSQ9UJT2 592 aa16.46■□□□□ 0.23
PABPC4-215ENST00000484555 ABCC4O15439 1325 aa16.45■□□□□ 0.22
PABPC4-215ENST00000484555 NEFMP07197 916 aa16.45■□□□□ 0.22
PABPC4-215ENST00000484555 KIAA2012Q0VF49 1180 aa16.45■□□□□ 0.22
PABPC4-215ENST00000484555 CDC37L1Q7L3B6 337 aa16.45■□□□□ 0.22
PABPC4-215ENST00000484555 UTP14AQ9BVJ6 771 aaKnown RBP16.45■□□□□ 0.22
PABPC4-215ENST00000484555 GLIS2Q9BZE0 524 aaPredicted RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms