RNA–Protein interactions for RNA: ENST00000484186.5

NUP50-215, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-215ENST00000484186 RPGRQ92834 1020 aaKnown RBP12.3□□□□□ -0.44
NUP50-215ENST00000484186 RBM17Q96I25 401 aaKnown RBP12.3□□□□□ -0.44
NUP50-215ENST00000484186 CFAP44Q96MT7 982 aa12.3□□□□□ -0.44
NUP50-215ENST00000484186 UTP14AQ9BVJ6 771 aaKnown RBP12.3□□□□□ -0.44
NUP50-215ENST00000484186 DICER1Q9UPY3 1922 aaKnown RBP12.3□□□□□ -0.44
NUP50-215ENST00000484186 RIC1Q4ADV7 1423 aa12.29□□□□□ -0.44
NUP50-215ENST00000484186 HOXB7P09629 217 aa12.29□□□□□ -0.44
NUP50-215ENST00000484186 SLC10A5Q5PT55 438 aa12.29□□□□□ -0.44
NUP50-215ENST00000484186 CC2D2BQ6DHV5 1058 aa12.29□□□□□ -0.44
NUP50-215ENST00000484186 SYNE4Q8N205 404 aa12.29□□□□□ -0.44
NUP50-215ENST00000484186 NLRP3Q96P20 1036 aa12.29□□□□□ -0.44
NUP50-215ENST00000484186 CRAMP1Q96RY5 1269 aa12.29□□□□□ -0.44
NUP50-215ENST00000484186 ZNF277Q9NRM2 450 aaPredicted RBP12.29□□□□□ -0.44
NUP50-215ENST00000484186 CEP350Q5VT06 3117 aa12.29□□□□□ -0.44
NUP50-215ENST00000484186 WDR90Q96KV7 1748 aa12.28□□□□□ -0.44
NUP50-215ENST00000484186 APAF1O14727 1248 aa12.28□□□□□ -0.44
NUP50-215ENST00000484186 HTRA3P83110 453 aa12.28□□□□□ -0.44
NUP50-215ENST00000484186 TCIRG1Q13488 830 aa12.28□□□□□ -0.44
NUP50-215ENST00000484186 HDGFL1Q5TGJ6 251 aa12.28□□□□□ -0.44
NUP50-215ENST00000484186 PSMD1Q99460 953 aa12.28□□□□□ -0.44
NUP50-215ENST00000484186 CHPF2Q9P2E5 772 aa12.28□□□□□ -0.44
NUP50-215ENST00000484186 ZNF853P0CG23 659 aa12.27□□□□□ -0.45
NUP50-215ENST00000484186 ZEB1P37275 1124 aaPredicted RBP12.27□□□□□ -0.45
NUP50-215ENST00000484186 IARSP41252 1262 aaKnown RBP12.27□□□□□ -0.45
NUP50-215ENST00000484186 GRIPAP1Q4V328 841 aa12.27□□□□□ -0.45
NUP50-215ENST00000484186 DUSP27Q5VZP5 1158 aa12.27□□□□□ -0.45
NUP50-215ENST00000484186 C3orf67Q6ZVT6 689 aa12.27□□□□□ -0.45
NUP50-215ENST00000484186 NLRP10Q86W26 655 aa12.27□□□□□ -0.45
NUP50-215ENST00000484186 MBIPQ9NS73 344 aa12.27□□□□□ -0.45
NUP50-215ENST00000484186 DBF4Q9UBU7 674 aaPredicted RBP12.27□□□□□ -0.45
NUP50-215ENST00000484186 RNF123Q5XPI4 1314 aa12.27□□□□□ -0.45
NUP50-215ENST00000484186 IQCA1LA6NCM1 817 aa12.26□□□□□ -0.45
NUP50-215ENST00000484186 FZD9O00144 591 aa12.26□□□□□ -0.45
NUP50-215ENST00000484186 PPEF1O14829 653 aaPredicted RBP12.26□□□□□ -0.45
NUP50-215ENST00000484186 GNAI1P63096 354 aa12.26□□□□□ -0.45
NUP50-215ENST00000484186 CALD1Q05682 793 aaKnown RBP12.26□□□□□ -0.45
NUP50-215ENST00000484186 ANKRD13DQ6ZTN6 518 aa12.26□□□□□ -0.45
NUP50-215ENST00000484186 PLBD2Q8NHP8 589 aa12.26□□□□□ -0.45
NUP50-215ENST00000484186 KLRG1Q96E93 195 aa12.26□□□□□ -0.45
NUP50-215ENST00000484186 L3MBTL3Q96JM7 780 aaPredicted RBP12.26□□□□□ -0.45
NUP50-215ENST00000484186 TRMT112Q9UI30 125 aaKnown RBP12.26□□□□□ -0.45
NUP50-215ENST00000484186 TCERG1O14776 1098 aaKnown RBP12.25□□□□□ -0.45
NUP50-215ENST00000484186 JDP2Q8WYK2 163 aa12.25□□□□□ -0.45
NUP50-215ENST00000484186 TMX4Q9H1E5 349 aaPredicted RBP12.25□□□□□ -0.45
NUP50-215ENST00000484186 IFT57Q9NWB7 429 aa12.25□□□□□ -0.45
NUP50-215ENST00000484186 HYPKQ9NX55 129 aa12.25□□□□□ -0.45
NUP50-215ENST00000484186 SNED1Q8TER0 1413 aa12.25□□□□□ -0.45
NUP50-215ENST00000484186 HCLS1P14317 486 aaPredicted RBP12.24□□□□□ -0.45
NUP50-215ENST00000484186 CHADLQ6NUI6 762 aa12.24□□□□□ -0.45
NUP50-215ENST00000484186 SH3TC1Q8TE82 1336 aa12.24□□□□□ -0.45
NUP50-215ENST00000484186 ZNF541Q9H0D2 1346 aa12.24□□□□□ -0.45
NUP50-215ENST00000484186 TAF1DQ9H5J8 278 aaPredicted RBP12.24□□□□□ -0.45
NUP50-215ENST00000484186 BBOX1O75936 387 aa12.23□□□□□ -0.45
NUP50-215ENST00000484186 POTEIP0CG38 1075 aa12.23□□□□□ -0.45
NUP50-215ENST00000484186 POTEJP0CG39 1038 aa12.23□□□□□ -0.45
NUP50-215ENST00000484186 CCDC184Q52MB2 194 aa12.23□□□□□ -0.45
NUP50-215ENST00000484186 ISCA1Q9BUE6 129 aa12.23□□□□□ -0.45
NUP50-215ENST00000484186 HACL1Q9UJ83 578 aa12.23□□□□□ -0.45
NUP50-215ENST00000484186 ATP6V0A2Q9Y487 856 aa12.23□□□□□ -0.45
NUP50-215ENST00000484186 ABCC4O15439 1325 aa12.22□□□□□ -0.45
NUP50-215ENST00000484186 ELL2O00472 640 aaPredicted RBP12.22□□□□□ -0.45
NUP50-215ENST00000484186 EIF6P56537 245 aaKnown RBP12.22□□□□□ -0.45
NUP50-215ENST00000484186 DDX46Q7L014 1031 aaKnown RBP12.22□□□□□ -0.45
NUP50-215ENST00000484186 SLC51AQ86UW1 340 aa12.22□□□□□ -0.45
NUP50-215ENST00000484186 LDHDQ86WU2 507 aa12.22□□□□□ -0.45
NUP50-215ENST00000484186 SP8Q8IXZ3 490 aa12.22□□□□□ -0.45
NUP50-215ENST00000484186 GPC2Q8N158 579 aa12.22□□□□□ -0.45
NUP50-215ENST00000484186 LARGE2Q8N3Y3 721 aa12.22□□□□□ -0.45
NUP50-215ENST00000484186 JMYQ8N9B5 988 aa12.22□□□□□ -0.45
NUP50-215ENST00000484186 VPS33BQ9H267 617 aa12.22□□□□□ -0.45
NUP50-215ENST00000484186 ATP5J2-PTCD1G3V325 749 aa12.21□□□□□ -0.45
NUP50-215ENST00000484186 EPHX2P34913 555 aa12.21□□□□□ -0.45
NUP50-215ENST00000484186 TRIM28Q13263 835 aaKnown RBP12.21□□□□□ -0.45
NUP50-215ENST00000484186 RIC3Q7Z5B4 369 aa12.21□□□□□ -0.45
NUP50-215ENST00000484186 C8orf58Q8NAV2 365 aa12.21□□□□□ -0.45
NUP50-215ENST00000484186 ZNF428Q96B54 188 aa12.21□□□□□ -0.45
NUP50-215ENST00000484186 CHMP4AQ9BY43 222 aa12.21□□□□□ -0.45
NUP50-215ENST00000484186 PHAXQ9H814 394 aaKnown RBP12.21□□□□□ -0.45
NUP50-215ENST00000484186 ANKRD36CQ5JPF3 1778 aa12.2□□□□□ -0.46
NUP50-215ENST00000484186 PPIP5K2O43314 1243 aa12.2□□□□□ -0.46
NUP50-215ENST00000484186 GOLGA2Q08379 1002 aa12.2□□□□□ -0.46
NUP50-215ENST00000484186 GRAPQ13588 217 aa12.2□□□□□ -0.46
NUP50-215ENST00000484186 EAPPQ56P03 285 aaPredicted RBP12.2□□□□□ -0.46
NUP50-215ENST00000484186 PNMA8AQ86V59 439 aaPredicted RBP12.2□□□□□ -0.46
NUP50-215ENST00000484186 NIM1KQ8IY84 436 aa12.2□□□□□ -0.46
NUP50-215ENST00000484186 MPNDQ8N594 471 aa12.2□□□□□ -0.46
NUP50-215ENST00000484186 SUPT20HQ8NEM7 779 aa12.2□□□□□ -0.46
NUP50-215ENST00000484186 GRAPLQ8TC17 118 aaPredicted RBP12.2□□□□□ -0.46
NUP50-215ENST00000484186 FAM89AQ96GI7 184 aa12.2□□□□□ -0.46
NUP50-215ENST00000484186 RTFDC1Q9BY42 306 aaPredicted RBP12.2□□□□□ -0.46
NUP50-215ENST00000484186 GJA3Q9Y6H8 435 aa12.2□□□□□ -0.46
NUP50-215ENST00000484186 SCN4AP35499 1836 aa12.2□□□□□ -0.46
NUP50-215ENST00000484186 ZNF316A6NFI3 1004 aaPredicted RBP12.19□□□□□ -0.46
NUP50-215ENST00000484186 SF3B3Q15393 1217 aaKnown RBP12.19□□□□□ -0.46
NUP50-215ENST00000484186 AOC3Q16853 763 aa12.19□□□□□ -0.46
NUP50-215ENST00000484186 CCDC27Q2M243 656 aa12.19□□□□□ -0.46
NUP50-215ENST00000484186 DPP8Q6V1X1 898 aaPredicted RBP12.19□□□□□ -0.46
NUP50-215ENST00000484186 CLEC11AQ9Y240 323 aa12.19□□□□□ -0.46
NUP50-215ENST00000484186 COL4A5P29400 1685 aa12.19□□□□□ -0.46
NUP50-215ENST00000484186 IFFO2Q5TF58 517 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms