RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 IL25Q9H293 177 aa13.68□□□□□ -0.22
SEC61A1-205ENST00000483956 BABAM1Q9NWV8 329 aa13.68□□□□□ -0.22
SEC61A1-205ENST00000483956 NRBP1Q9UHY1 535 aa13.68□□□□□ -0.22
SEC61A1-205ENST00000483956 ADAMTS13Q76LX8 1427 aa13.68□□□□□ -0.22
SEC61A1-205ENST00000483956 PTPRUQ92729 1446 aa13.68□□□□□ -0.22
SEC61A1-205ENST00000483956 ZSCAN22P10073 491 aaPredicted RBP13.68□□□□□ -0.22
SEC61A1-205ENST00000483956 MYCBPQ99417 103 aaPredicted RBP13.68□□□□□ -0.22
SEC61A1-205ENST00000483956 UBR1Q8IWV7 1749 aa13.67□□□□□ -0.22
SEC61A1-205ENST00000483956 SGSM2O43147 1006 aa13.67□□□□□ -0.22
SEC61A1-205ENST00000483956 UBE2HP62256 183 aa13.67□□□□□ -0.22
SEC61A1-205ENST00000483956 USP44Q9H0E7 712 aa13.67□□□□□ -0.22
SEC61A1-205ENST00000483956 MUM1L1Q5H9M0 696 aa13.67□□□□□ -0.22
SEC61A1-205ENST00000483956 CNPY4Q8N129 248 aa13.67□□□□□ -0.22
SEC61A1-205ENST00000483956 NCAPGQ9BPX3 1015 aa13.67□□□□□ -0.22
SEC61A1-205ENST00000483956 ERBB3P21860 1342 aa13.67□□□□□ -0.22
SEC61A1-205ENST00000483956 POLA2Q14181 598 aa13.66□□□□□ -0.22
SEC61A1-205ENST00000483956 BMS1Q14692 1282 aaKnown RBP13.66□□□□□ -0.22
SEC61A1-205ENST00000483956 PI4K2BQ8TCG2 481 aa13.66□□□□□ -0.22
SEC61A1-205ENST00000483956 CNPY2Q9Y2B0 182 aa13.66□□□□□ -0.22
SEC61A1-205ENST00000483956 POLR3GO15318 223 aaPredicted RBP13.66□□□□□ -0.22
SEC61A1-205ENST00000483956 UBTFL1P0CB47 393 aaPredicted RBP13.66□□□□□ -0.22
SEC61A1-205ENST00000483956 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.66□□□□□ -0.22
SEC61A1-205ENST00000483956 SNX14Q9Y5W7 946 aa13.66□□□□□ -0.22
SEC61A1-205ENST00000483956 FHOD1Q9Y613 1164 aa13.66□□□□□ -0.22
SEC61A1-205ENST00000483956 TMEM2Q9UHN6 1383 aa13.66□□□□□ -0.22
SEC61A1-205ENST00000483956 SLFNL1Q499Z3 407 aa13.66□□□□□ -0.22
SEC61A1-205ENST00000483956 ATP6V1DQ9Y5K8 247 aa13.66□□□□□ -0.22
SEC61A1-205ENST00000483956 AXDND1Q5T1B0 1012 aaPredicted RBP13.65□□□□□ -0.22
SEC61A1-205ENST00000483956 ZSCAN25Q6NSZ9 544 aa13.65□□□□□ -0.22
SEC61A1-205ENST00000483956 DRC7Q8IY82 874 aa13.65□□□□□ -0.22
SEC61A1-205ENST00000483956 LSG1Q9H089 658 aaKnown RBP13.65□□□□□ -0.22
SEC61A1-205ENST00000483956 LIMCH1Q9UPQ0 1083 aa13.65□□□□□ -0.22
SEC61A1-205ENST00000483956 MAP3K5Q99683 1374 aa13.65□□□□□ -0.22
SEC61A1-205ENST00000483956 STX6O43752 255 aa13.65□□□□□ -0.22
SEC61A1-205ENST00000483956 PLA2G4AP47712 749 aa13.65□□□□□ -0.22
SEC61A1-205ENST00000483956 CT47A1Q5JQC4 288 aaPredicted RBP13.65□□□□□ -0.22
SEC61A1-205ENST00000483956 CTR9Q6PD62 1173 aa13.65□□□□□ -0.22
SEC61A1-205ENST00000483956 CCDC191Q8NCU4 936 aa13.65□□□□□ -0.22
SEC61A1-205ENST00000483956 ERO1AQ96HE7 468 aa13.65□□□□□ -0.22
SEC61A1-205ENST00000483956 EYA1Q99502 592 aa13.65□□□□□ -0.22
SEC61A1-205ENST00000483956 USP42Q9H9J4 1324 aaKnown RBP13.64□□□□□ -0.23
SEC61A1-205ENST00000483956 GNAT3A8MTJ3 354 aa13.64□□□□□ -0.23
SEC61A1-205ENST00000483956 ST5P78524 1137 aa13.64□□□□□ -0.23
SEC61A1-205ENST00000483956 TXLNBQ8N3L3 684 aa13.64□□□□□ -0.23
SEC61A1-205ENST00000483956 GPATCH11Q8N954 259 aa13.64□□□□□ -0.23
SEC61A1-205ENST00000483956 PIK3C2AO00443 1686 aa13.64□□□□□ -0.23
SEC61A1-205ENST00000483956 NWD1Q149M9 1564 aa13.64□□□□□ -0.23
SEC61A1-205ENST00000483956 F13A1P00488 732 aa13.64□□□□□ -0.23
SEC61A1-205ENST00000483956 GUCY2CP25092 1073 aa13.64□□□□□ -0.23
SEC61A1-205ENST00000483956 ATG3Q9NT62 314 aa13.64□□□□□ -0.23
SEC61A1-205ENST00000483956 USP27XA6NNY8 438 aa13.64□□□□□ -0.23
SEC61A1-205ENST00000483956 SYT1P21579 422 aa13.64□□□□□ -0.23
SEC61A1-205ENST00000483956 AK2P54819 239 aa13.64□□□□□ -0.23
SEC61A1-205ENST00000483956 RUFY3Q7L099 469 aa13.64□□□□□ -0.23
SEC61A1-205ENST00000483956 IL1RAPL2Q9NP60 686 aa13.64□□□□□ -0.23
SEC61A1-205ENST00000483956 KDM4FA0A1W2PPD8 638 aa13.63□□□□□ -0.23
SEC61A1-205ENST00000483956 CNTROBQ8N137 903 aa13.63□□□□□ -0.23
SEC61A1-205ENST00000483956 RHPN1Q8TCX5 695 aa13.63□□□□□ -0.23
SEC61A1-205ENST00000483956 SMARCE1Q969G3 411 aa13.63□□□□□ -0.23
SEC61A1-205ENST00000483956 ZNF622Q969S3 477 aaKnown RBP eCLIP13.63□□□□□ -0.233e-6■□□□□ 8.1
SEC61A1-205ENST00000483956 SLC26A8Q96RN1 970 aa13.63□□□□□ -0.23
SEC61A1-205ENST00000483956 USP54Q70EL1 1684 aa13.63□□□□□ -0.23
SEC61A1-205ENST00000483956 PNMA6AP0CW24 399 aaPredicted RBP13.63□□□□□ -0.23
SEC61A1-205ENST00000483956 NUTM1Q86Y26 1132 aa13.63□□□□□ -0.23
SEC61A1-205ENST00000483956 ZSCAN26Q16670 478 aa13.62□□□□□ -0.23
SEC61A1-205ENST00000483956 TEX35Q5T0J7 233 aa13.62□□□□□ -0.23
SEC61A1-205ENST00000483956 PPP1R42Q7Z4L9 355 aa13.62□□□□□ -0.23
SEC61A1-205ENST00000483956 BANK1Q8NDB2 785 aa13.62□□□□□ -0.23
SEC61A1-205ENST00000483956 CACTINQ8WUQ7 758 aaKnown RBP13.62□□□□□ -0.23
SEC61A1-205ENST00000483956 CHD2O14647 1828 aaKnown RBP13.62□□□□□ -0.23
SEC61A1-205ENST00000483956 TNRQ92752 1358 aa13.62□□□□□ -0.23
SEC61A1-205ENST00000483956 PLEKHG1Q9ULL1 1385 aa13.62□□□□□ -0.23
SEC61A1-205ENST00000483956 H2AFXP16104 143 aaPredicted RBP13.62□□□□□ -0.23
SEC61A1-205ENST00000483956 DRC1Q96MC2 740 aa13.62□□□□□ -0.23
SEC61A1-205ENST00000483956 SMC3Q9UQE7 1217 aa13.62□□□□□ -0.23
SEC61A1-205ENST00000483956 CLCN6P51797 869 aa13.61□□□□□ -0.23
SEC61A1-205ENST00000483956 LUZP1Q86V48 1076 aa13.61□□□□□ -0.23
SEC61A1-205ENST00000483956 RASEFQ8IZ41 740 aa13.61□□□□□ -0.23
SEC61A1-205ENST00000483956 FIBPO43427 364 aa13.61□□□□□ -0.23
SEC61A1-205ENST00000483956 SURF6O75683 361 aaKnown RBP13.61□□□□□ -0.23
SEC61A1-205ENST00000483956 TAF7Q15545 349 aaPredicted RBP13.61□□□□□ -0.23
SEC61A1-205ENST00000483956 JRKLQ9Y4A0 524 aa13.61□□□□□ -0.23
SEC61A1-205ENST00000483956 TTC41PQ6P2S7 1318 aa13.61□□□□□ -0.23
SEC61A1-205ENST00000483956 SLU7O95391 586 aaKnown RBP13.61□□□□□ -0.23
SEC61A1-205ENST00000483956 ERCC6LQ2NKX8 1250 aa13.61□□□□□ -0.23
SEC61A1-205ENST00000483956 TSGA10IPQ3SY00 556 aa13.61□□□□□ -0.23
SEC61A1-205ENST00000483956 BRMS1Q9HCU9 246 aa13.61□□□□□ -0.23
SEC61A1-205ENST00000483956 HYPKQ9NX55 129 aa13.61□□□□□ -0.23
SEC61A1-205ENST00000483956 TSPOAP1O95153 1857 aa13.6□□□□□ -0.23
SEC61A1-205ENST00000483956 MARF1Q9Y4F3 1742 aaKnown RBP13.6□□□□□ -0.23
SEC61A1-205ENST00000483956 AMPHP49418 695 aa13.6□□□□□ -0.23
SEC61A1-205ENST00000483956 SART3Q15020 963 aaKnown RBP13.6□□□□□ -0.23
SEC61A1-205ENST00000483956 HSP90AB4PQ58FF6 505 aa13.6□□□□□ -0.23
SEC61A1-205ENST00000483956 KCNB2Q92953 911 aa13.6□□□□□ -0.23
SEC61A1-205ENST00000483956 TM6SF1Q9BZW5 370 aa13.6□□□□□ -0.23
SEC61A1-205ENST00000483956 BCCIPQ9P287 314 aaKnown RBP eCLIP13.6□□□□□ -0.23
SEC61A1-205ENST00000483956 MED1Q15648 1581 aaPredicted RBP13.6□□□□□ -0.23
SEC61A1-205ENST00000483956 PTPN14Q15678 1187 aa13.6□□□□□ -0.23
SEC61A1-205ENST00000483956 VPS53Q5VIR6 699 aa13.6□□□□□ -0.23
SEC61A1-205ENST00000483956 SAMD1Q6SPF0 538 aaPredicted RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms