RNA–Protein interactions for RNA: ENST00000483768.1

ZNF561-216, Transcript of zinc finger protein 561, humanhuman

TSL 1 (best)

Gene ZNF561, Length 579 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF561-216ENST00000483768 USP17L3A6NCW0 530 aa4.89□□□□□ -1.63
ZNF561-216ENST00000483768 USP17L4A6NCW7 530 aa4.89□□□□□ -1.63
ZNF561-216ENST00000483768 FURINP09958 794 aa4.89□□□□□ -1.63
ZNF561-216ENST00000483768 BAG6P46379 1132 aa4.89□□□□□ -1.63
ZNF561-216ENST00000483768 DGKGP49619 791 aa4.89□□□□□ -1.63
ZNF561-216ENST00000483768 SRPK2P78362 688 aaKnown RBP4.89□□□□□ -1.63
ZNF561-216ENST00000483768 ZNF468Q5VIY5 522 aaPredicted RBP4.89□□□□□ -1.63
ZNF561-216ENST00000483768 CCDC102BQ68D86 513 aa4.89□□□□□ -1.63
ZNF561-216ENST00000483768 USP17L2Q6R6M4 530 aa4.89□□□□□ -1.63
ZNF561-216ENST00000483768 USP17L1Q7RTZ2 530 aa4.89□□□□□ -1.63
ZNF561-216ENST00000483768 ALYREFQ86V81 257 aaKnown RBP4.89□□□□□ -1.63
ZNF561-216ENST00000483768 RHPN1Q8TCX5 695 aa4.89□□□□□ -1.63
ZNF561-216ENST00000483768 IGSF5Q9NSI5 407 aa4.89□□□□□ -1.63
ZNF561-216ENST00000483768 NOP53Q9NZM5 478 aaKnown RBP4.89□□□□□ -1.63
ZNF561-216ENST00000483768 HCN4Q9Y3Q4 1203 aa4.89□□□□□ -1.63
ZNF561-216ENST00000483768 FANCD2Q9BXW9 1451 aa4.88□□□□□ -1.63
ZNF561-216ENST00000483768 RBM47A0AV96 593 aaKnown RBP4.88□□□□□ -1.63
ZNF561-216ENST00000483768 C1QTNF9BB2RNN3 333 aa4.88□□□□□ -1.63
ZNF561-216ENST00000483768 K7ELQ4 463 aaPredicted RBP4.88□□□□□ -1.63
ZNF561-216ENST00000483768 EFSO43281 561 aa4.88□□□□□ -1.63
ZNF561-216ENST00000483768 ATP1A2P50993 1020 aa4.88□□□□□ -1.63
ZNF561-216ENST00000483768 EPHA4P54764 986 aa4.88□□□□□ -1.63
ZNF561-216ENST00000483768 SAMD5Q5TGI4 173 aa4.88□□□□□ -1.63
ZNF561-216ENST00000483768 SYT9Q86SS6 491 aa4.88□□□□□ -1.63
ZNF561-216ENST00000483768 MRRFQ96E11 262 aaKnown RBP4.88□□□□□ -1.63
ZNF561-216ENST00000483768 ZNF594Q96JF6 807 aaPredicted RBP4.88□□□□□ -1.63
ZNF561-216ENST00000483768 TSPAN10Q9H1Z9 355 aaPredicted RBP4.88□□□□□ -1.63
ZNF561-216ENST00000483768 AVENQ9NQS1 362 aaPredicted RBP4.88□□□□□ -1.63
ZNF561-216ENST00000483768 KIAA1024Q9UPX6 916 aa4.88□□□□□ -1.63
ZNF561-216ENST00000483768 CHMP3Q9Y3E7 222 aa4.88□□□□□ -1.63
ZNF561-216ENST00000483768 RBM19Q9Y4C8 960 aaKnown RBP4.88□□□□□ -1.63
ZNF561-216ENST00000483768 ZBTB7BO15156 539 aaPredicted RBP4.87□□□□□ -1.63
ZNF561-216ENST00000483768 PPM1GO15355 546 aaPredicted RBP4.87□□□□□ -1.63
ZNF561-216ENST00000483768 ATP9BO43861 1147 aa4.87□□□□□ -1.63
ZNF561-216ENST00000483768 ALAS2P22557 587 aa4.87□□□□□ -1.63
ZNF561-216ENST00000483768 LMOD1P29536 600 aaPredicted RBP4.87□□□□□ -1.63
ZNF561-216ENST00000483768 CLDN10P78369 228 aa4.87□□□□□ -1.63
ZNF561-216ENST00000483768 SFSWAPQ12872 951 aaKnown RBP4.87□□□□□ -1.63
ZNF561-216ENST00000483768 LAMC2Q13753 1193 aa4.87□□□□□ -1.63
ZNF561-216ENST00000483768 RAB44Q7Z6P3 723 aaPredicted RBP4.87□□□□□ -1.63
ZNF561-216ENST00000483768 CD163Q86VB7 1156 aa4.87□□□□□ -1.63
ZNF561-216ENST00000483768 OGFOD1Q8N543 542 aa4.87□□□□□ -1.63
ZNF561-216ENST00000483768 PLVAPQ9BX97 442 aa4.87□□□□□ -1.63
ZNF561-216ENST00000483768 PPP1R12CQ9BZL4 782 aa4.87□□□□□ -1.63
ZNF561-216ENST00000483768 KIAA1522Q9P206 1035 aaPredicted RBP4.87□□□□□ -1.63
ZNF561-216ENST00000483768 MKRN1Q9UHC7 482 aaKnown RBP4.87□□□□□ -1.63
ZNF561-216ENST00000483768 ELOA3CA0A087WX78 387 aaPredicted RBP4.86□□□□□ -1.63
ZNF561-216ENST00000483768 TMEM88BA6NKF7 163 aa4.86□□□□□ -1.63
ZNF561-216ENST00000483768 ELOA3DA6NLF2 546 aaPredicted RBP4.86□□□□□ -1.63
ZNF561-216ENST00000483768 SFI1A8K8P3 1242 aa4.86□□□□□ -1.63
ZNF561-216ENST00000483768 EML1O00423 815 aa4.86□□□□□ -1.63
ZNF561-216ENST00000483768 PPP1R12BO60237 982 aaPredicted RBP4.86□□□□□ -1.63
ZNF561-216ENST00000483768 CHRNA4P43681 627 aa4.86□□□□□ -1.63
ZNF561-216ENST00000483768 ELOA3BQ3SY89 546 aa4.86□□□□□ -1.63
ZNF561-216ENST00000483768 PLEKHM2Q8IWE5 1019 aa4.86□□□□□ -1.63
ZNF561-216ENST00000483768 TSEN2Q8NCE0 465 aaKnown RBP4.86□□□□□ -1.63
ZNF561-216ENST00000483768 ELOA3Q8NG57 546 aa4.86□□□□□ -1.63
ZNF561-216ENST00000483768 HSH2DQ96JZ2 352 aa4.86□□□□□ -1.63
ZNF561-216ENST00000483768 CEP63Q96MT8 703 aa4.86□□□□□ -1.63
ZNF561-216ENST00000483768 UCN2Q96RP3 112 aa4.86□□□□□ -1.63
ZNF561-216ENST00000483768 SLC30A3Q99726 388 aa4.86□□□□□ -1.63
ZNF561-216ENST00000483768 CHD1O14646 1710 aa4.86□□□□□ -1.63
ZNF561-216ENST00000483768 PALM3A6NDB9 673 aaPredicted RBP4.85□□□□□ -1.63
ZNF561-216ENST00000483768 PSMA6P60900 246 aaKnown RBP4.85□□□□□ -1.63
ZNF561-216ENST00000483768 LARGE2Q8N3Y3 721 aa4.85□□□□□ -1.63
ZNF561-216ENST00000483768 CHMP7Q8WUX9 453 aaPredicted RBP4.85□□□□□ -1.63
ZNF561-216ENST00000483768 TRIM11Q96F44 468 aa4.85□□□□□ -1.63
ZNF561-216ENST00000483768 PHACTR1Q9C0D0 580 aa4.85□□□□□ -1.63
ZNF561-216ENST00000483768 PEG3Q9GZU2 1588 aa4.84□□□□□ -1.63
ZNF561-216ENST00000483768 LGR5O75473 907 aa4.84□□□□□ -1.63
ZNF561-216ENST00000483768 RASA1P20936 1047 aa4.84□□□□□ -1.63
ZNF561-216ENST00000483768 TBC1D8BQ0IIM8 1120 aa4.84□□□□□ -1.63
ZNF561-216ENST00000483768 SPEM2Q0P670 501 aa4.84□□□□□ -1.63
ZNF561-216ENST00000483768 NEUROD1Q13562 356 aa4.84□□□□□ -1.63
ZNF561-216ENST00000483768 DOC2BQ14184 412 aa4.84□□□□□ -1.63
ZNF561-216ENST00000483768 TXNDC2Q86VQ3 553 aa4.84□□□□□ -1.63
ZNF561-216ENST00000483768 ZNF280CQ8ND82 737 aa4.84□□□□□ -1.63
ZNF561-216ENST00000483768 C7orf43Q8WVR3 580 aa4.84□□□□□ -1.63
ZNF561-216ENST00000483768 NGLY1Q96IV0 654 aa4.84□□□□□ -1.63
ZNF561-216ENST00000483768 POLR3GLQ9BT43 218 aa4.84□□□□□ -1.63
ZNF561-216ENST00000483768 IGFLR1Q9H665 355 aa4.84□□□□□ -1.63
ZNF561-216ENST00000483768 BRD7Q9NPI1 651 aa4.84□□□□□ -1.63
ZNF561-216ENST00000483768 ANKIB1Q9P2G1 1089 aa4.84□□□□□ -1.63
ZNF561-216ENST00000483768 GPC6Q9Y625 555 aaPredicted RBP4.84□□□□□ -1.63
ZNF561-216ENST00000483768 WIZO95785 1651 aa4.83□□□□□ -1.64
ZNF561-216ENST00000483768 AQRO60306 1485 aaKnown RBP eCLIP4.83□□□□□ -1.644e-6■■■■■ 31
ZNF561-216ENST00000483768 M0R082 166 aa4.83□□□□□ -1.64
ZNF561-216ENST00000483768 SIN3BO75182 1162 aa4.83□□□□□ -1.64
ZNF561-216ENST00000483768 ADH7P40394 386 aa4.83□□□□□ -1.64
ZNF561-216ENST00000483768 PRRT3Q5FWE3 981 aa4.83□□□□□ -1.64
ZNF561-216ENST00000483768 C1orf53Q5VUE5 145 aa4.83□□□□□ -1.64
ZNF561-216ENST00000483768 C8orf86Q6ZUL3 223 aa4.83□□□□□ -1.64
ZNF561-216ENST00000483768 ZNF417Q8TAU3 575 aa4.83□□□□□ -1.64
ZNF561-216ENST00000483768 SCG3Q8WXD2 468 aaKnown RBP4.83□□□□□ -1.64
ZNF561-216ENST00000483768 SUSD3Q96L08 255 aa4.83□□□□□ -1.64
ZNF561-216ENST00000483768 ZNF587Q96SQ5 575 aaPredicted RBP4.83□□□□□ -1.64
ZNF561-216ENST00000483768 TFIP11Q9UBB9 837 aaKnown RBP4.83□□□□□ -1.64
ZNF561-216ENST00000483768 KCNH4Q9UQ05 1017 aa4.83□□□□□ -1.64
ZNF561-216ENST00000483768 GNEQ9Y223 722 aaKnown RBP4.83□□□□□ -1.64
ZNF561-216ENST00000483768 EIF4G3O43432 1585 aaKnown RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms