RNA–Protein interactions for RNA: ENST00000483409.1

SSR1-208, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-208ENST00000483409 NLRP10Q86W26 655 aa17.2■□□□□ 0.34
SSR1-208ENST00000483409 ATP5J2-PTCD1G3V325 749 aa17.19■□□□□ 0.34
SSR1-208ENST00000483409 DDX58O95786 925 aaKnown RBP17.19■□□□□ 0.34
SSR1-208ENST00000483409 G2E3Q7L622 706 aa17.19■□□□□ 0.34
SSR1-208ENST00000483409 UTP14AQ9BVJ6 771 aaKnown RBP17.19■□□□□ 0.34
SSR1-208ENST00000483409 PDZRN3Q9UPQ7 1066 aa17.19■□□□□ 0.34
SSR1-208ENST00000483409 YY1P25490 414 aa17.18■□□□□ 0.34
SSR1-208ENST00000483409 HNRNPUQ00839 825 aaKnown RBP eCLIP17.18■□□□□ 0.34
SSR1-208ENST00000483409 TTLL6Q8N841 843 aa17.18■□□□□ 0.34
SSR1-208ENST00000483409 DDX60Q8IY21 1712 aaKnown RBP17.18■□□□□ 0.34
SSR1-208ENST00000483409 SRGNP10124 158 aa17.17■□□□□ 0.34
SSR1-208ENST00000483409 MYD88Q99836 296 aa17.17■□□□□ 0.34
SSR1-208ENST00000483409 ISCA1Q9BUE6 129 aa17.17■□□□□ 0.34
SSR1-208ENST00000483409 MAP3K2Q9Y2U5 619 aa17.17■□□□□ 0.34
SSR1-208ENST00000483409 ADCY9O60503 1353 aa17.16■□□□□ 0.34
SSR1-208ENST00000483409 RIC1Q4ADV7 1423 aa17.16■□□□□ 0.34
SSR1-208ENST00000483409 PI4KAP2A4QPH2 592 aa17.16■□□□□ 0.34
SSR1-208ENST00000483409 FLIIQ13045 1269 aa17.16■□□□□ 0.34
SSR1-208ENST00000483409 STYK1Q6J9G0 422 aa17.16■□□□□ 0.34
SSR1-208ENST00000483409 ARHGAP27Q6ZUM4 889 aa17.16■□□□□ 0.34
SSR1-208ENST00000483409 SYNE4Q8N205 404 aa17.16■□□□□ 0.34
SSR1-208ENST00000483409 PI4KAP1Q8N8J0 262 aa17.16■□□□□ 0.34
SSR1-208ENST00000483409 MASTLQ96GX5 879 aa17.16■□□□□ 0.34
SSR1-208ENST00000483409 TRMT112Q9UI30 125 aaKnown RBP17.16■□□□□ 0.34
SSR1-208ENST00000483409 CCDC88AQ3V6T2 1871 aa17.16■□□□□ 0.34
SSR1-208ENST00000483409 KLRG2A4D1S0 409 aaPredicted RBP17.15■□□□□ 0.34
SSR1-208ENST00000483409 KSR2Q6VAB6 950 aa17.15■□□□□ 0.34
SSR1-208ENST00000483409 METTL22Q9BUU2 404 aaPredicted RBP17.15■□□□□ 0.34
SSR1-208ENST00000483409 ZNF219Q9P2Y4 722 aaPredicted RBP17.15■□□□□ 0.34
SSR1-208ENST00000483409 SBF1O95248 1867 aa17.15■□□□□ 0.34
SSR1-208ENST00000483409 RNF123Q5XPI4 1314 aa17.15■□□□□ 0.34
SSR1-208ENST00000483409 SH3TC1Q8TE82 1336 aa17.15■□□□□ 0.34
SSR1-208ENST00000483409 NPR1P16066 1061 aa17.14■□□□□ 0.33
SSR1-208ENST00000483409 FKBP5Q13451 457 aaPredicted RBP17.14■□□□□ 0.33
SSR1-208ENST00000483409 C3orf67Q6ZVT6 689 aa17.14■□□□□ 0.33
SSR1-208ENST00000483409 TRMT2AQ8IZ69 625 aaKnown RBP17.14■□□□□ 0.33
SSR1-208ENST00000483409 CNKSR1Q969H4 720 aa17.14■□□□□ 0.33
SSR1-208ENST00000483409 TAF1P21675 1872 aa17.14■□□□□ 0.33
SSR1-208ENST00000483409 FER1L6Q2WGJ9 1857 aa17.14■□□□□ 0.33
SSR1-208ENST00000483409 HCLS1P14317 486 aaPredicted RBP17.13■□□□□ 0.33
SSR1-208ENST00000483409 TRIM28Q13263 835 aaKnown RBP17.13■□□□□ 0.33
SSR1-208ENST00000483409 CRY2Q49AN0 593 aa17.13■□□□□ 0.33
SSR1-208ENST00000483409 RTL5Q5HYW3 569 aaPredicted RBP17.13■□□□□ 0.33
SSR1-208ENST00000483409 PRPF40BQ6NWY9 871 aaKnown RBP17.13■□□□□ 0.33
SSR1-208ENST00000483409 RPGRQ92834 1020 aaKnown RBP17.13■□□□□ 0.33
SSR1-208ENST00000483409 C21orf2O43822 256 aa17.12■□□□□ 0.33
SSR1-208ENST00000483409 SLC10A5Q5PT55 438 aa17.12■□□□□ 0.33
SSR1-208ENST00000483409 FAM89AQ96GI7 184 aa17.12■□□□□ 0.33
SSR1-208ENST00000483409 NLRP3Q96P20 1036 aa17.12■□□□□ 0.33
SSR1-208ENST00000483409 NEXNQ0ZGT2 675 aa17.11■□□□□ 0.33
SSR1-208ENST00000483409 CCDC191Q8NCU4 936 aa17.11■□□□□ 0.33
SSR1-208ENST00000483409 CWC25Q9NXE8 425 aaPredicted RBP17.11■□□□□ 0.33
SSR1-208ENST00000483409 MYH3P11055 1940 aa17.11■□□□□ 0.33
SSR1-208ENST00000483409 IGKV5-2P06315 115 aa17.1■□□□□ 0.33
SSR1-208ENST00000483409 DNAAF4Q8WXU2 420 aa17.1■□□□□ 0.33
SSR1-208ENST00000483409 BCL2L13Q9BXK5 485 aa17.1■□□□□ 0.33
SSR1-208ENST00000483409 F6X3S4 739 aa17.09■□□□□ 0.33
SSR1-208ENST00000483409 RASSF7Q02833 373 aa17.09■□□□□ 0.33
SSR1-208ENST00000483409 CWF19L2Q2TBE0 894 aaKnown RBP17.09■□□□□ 0.33
SSR1-208ENST00000483409 ZBTB38Q8NAP3 1195 aaPredicted RBP17.09■□□□□ 0.33
SSR1-208ENST00000483409 SSH1Q8WYL5 1049 aa17.09■□□□□ 0.33
SSR1-208ENST00000483409 JARID2Q92833 1246 aaPredicted RBP17.09■□□□□ 0.33
SSR1-208ENST00000483409 NEURL1BA8MQ27 555 aa17.08■□□□□ 0.32
SSR1-208ENST00000483409 IRS4O14654 1257 aaPredicted RBP17.08■□□□□ 0.32
SSR1-208ENST00000483409 ALDH1B1P30837 517 aa17.08■□□□□ 0.32
SSR1-208ENST00000483409 MRPL50Q8N5N7 158 aaKnown RBP17.08■□□□□ 0.32
SSR1-208ENST00000483409 RBM17Q96I25 401 aaKnown RBP17.08■□□□□ 0.32
SSR1-208ENST00000483409 HOXA10P31260 410 aaPredicted RBP17.07■□□□□ 0.32
SSR1-208ENST00000483409 OLFM4Q6UX06 510 aa17.07■□□□□ 0.32
SSR1-208ENST00000483409 DICER1Q9UPY3 1922 aaKnown RBP17.07■□□□□ 0.32
SSR1-208ENST00000483409 ZBED9Q6R2W3 1325 aa17.06■□□□□ 0.32
SSR1-208ENST00000483409 NFKBIEO00221 500 aa17.06■□□□□ 0.32
SSR1-208ENST00000483409 PCCAP05165 728 aaPredicted RBP17.06■□□□□ 0.32
SSR1-208ENST00000483409 C9orf131Q5VYM1 1079 aa17.06■□□□□ 0.32
SSR1-208ENST00000483409 C7orf43Q8WVR3 580 aa17.06■□□□□ 0.32
SSR1-208ENST00000483409 CRAMP1Q96RY5 1269 aa17.06■□□□□ 0.32
SSR1-208ENST00000483409 SMC4Q9NTJ3 1288 aa17.06■□□□□ 0.32
SSR1-208ENST00000483409 TIAM2Q8IVF5 1701 aa17.06■□□□□ 0.32
SSR1-208ENST00000483409 ABCC4O15439 1325 aa17.05■□□□□ 0.32
SSR1-208ENST00000483409 CT47B1P0C2W7 299 aaPredicted RBP17.05■□□□□ 0.32
SSR1-208ENST00000483409 ALDH1L2Q3SY69 923 aa17.05■□□□□ 0.32
SSR1-208ENST00000483409 SOGA3Q5TF21 947 aa17.05■□□□□ 0.32
SSR1-208ENST00000483409 SLC51AQ86UW1 340 aa17.05■□□□□ 0.32
SSR1-208ENST00000483409 PPEF1O14829 653 aaPredicted RBP17.04■□□□□ 0.32
SSR1-208ENST00000483409 GCKRQ14397 625 aa17.04■□□□□ 0.32
SSR1-208ENST00000483409 CCDC93Q567U6 631 aa17.04■□□□□ 0.32
SSR1-208ENST00000483409 DDX46Q7L014 1031 aaKnown RBP17.04■□□□□ 0.32
SSR1-208ENST00000483409 ZNF784Q8NCA9 323 aaPredicted RBP17.04■□□□□ 0.32
SSR1-208ENST00000483409 LINS1Q8NG48 757 aa17.04■□□□□ 0.32
SSR1-208ENST00000483409 RNF181Q9P0P0 153 aa17.04■□□□□ 0.32
SSR1-208ENST00000483409 SPEF2Q9C093 1822 aa17.04■□□□□ 0.32
SSR1-208ENST00000483409 COL4A1P02462 1669 aa17.04■□□□□ 0.32
SSR1-208ENST00000483409 PRELPP51888 382 aa17.03■□□□□ 0.32
SSR1-208ENST00000483409 SF3B3Q15393 1217 aaKnown RBP17.03■□□□□ 0.32
SSR1-208ENST00000483409 BEND3Q5T5X7 828 aa17.03■□□□□ 0.32
SSR1-208ENST00000483409 SLC4A10Q6U841 1118 aa17.03■□□□□ 0.32
SSR1-208ENST00000483409 UBE3BQ7Z3V4 1068 aa17.03■□□□□ 0.32
SSR1-208ENST00000483409 TAOK3Q9H2K8 898 aa17.03■□□□□ 0.32
SSR1-208ENST00000483409 PTPRCP08575 1304 aa17.02■□□□□ 0.32
SSR1-208ENST00000483409 CDHR2Q9BYE9 1310 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms