RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 KCNMB2Q9Y691 235 aa9.98□□□□□ -0.81
SF3B1-210ENST00000482158 GJA3Q9Y6H8 435 aa9.98□□□□□ -0.81
SF3B1-210ENST00000482158 EFSO43281 561 aa9.97□□□□□ -0.81
SF3B1-210ENST00000482158 PPFIA3O75145 1194 aa9.97□□□□□ -0.81
SF3B1-210ENST00000482158 ERCC3P19447 782 aa9.97□□□□□ -0.81
SF3B1-210ENST00000482158 ZNF837Q96EG3 531 aaPredicted RBP9.97□□□□□ -0.81
SF3B1-210ENST00000482158 GPR182O15218 404 aa9.96□□□□□ -0.82
SF3B1-210ENST00000482158 ATXN7O15265 892 aaPredicted RBP9.96□□□□□ -0.82
SF3B1-210ENST00000482158 DSC3Q14574 896 aa9.96□□□□□ -0.82
SF3B1-210ENST00000482158 TRIP4Q15650 581 aaPredicted RBP9.96□□□□□ -0.82
SF3B1-210ENST00000482158 BRD7Q9NPI1 651 aa9.96□□□□□ -0.82
SF3B1-210ENST00000482158 PCDHGC4Q9Y5F7 938 aa9.96□□□□□ -0.82
SF3B1-210ENST00000482158 A6NHS1 94 aa9.95□□□□□ -0.82
SF3B1-210ENST00000482158 H7C1W4 665 aa9.95□□□□□ -0.82
SF3B1-210ENST00000482158 TREHO43280 583 aa9.95□□□□□ -0.82
SF3B1-210ENST00000482158 BNIP3LO60238 219 aa9.95□□□□□ -0.82
SF3B1-210ENST00000482158 FAM157BP0CG42 384 aa9.95□□□□□ -0.82
SF3B1-210ENST00000482158 TNP2Q05952 138 aa9.95□□□□□ -0.82
SF3B1-210ENST00000482158 ZSCAN29Q8IWY8 852 aaPredicted RBP9.95□□□□□ -0.82
SF3B1-210ENST00000482158 PIK3R5Q8WYR1 880 aa9.95□□□□□ -0.82
SF3B1-210ENST00000482158 STRN4Q9NRL3 753 aa9.95□□□□□ -0.82
SF3B1-210ENST00000482158 FAM13BQ9NYF5 915 aa9.95□□□□□ -0.82
SF3B1-210ENST00000482158 USP5P45974 858 aa9.94□□□□□ -0.82
SF3B1-210ENST00000482158 KCNQ4P56696 695 aa9.94□□□□□ -0.82
SF3B1-210ENST00000482158 SFSWAPQ12872 951 aaKnown RBP9.94□□□□□ -0.82
SF3B1-210ENST00000482158 FIGNL1Q6PIW4 674 aa9.94□□□□□ -0.82
SF3B1-210ENST00000482158 GMCL1Q96IK5 515 aa9.94□□□□□ -0.82
SF3B1-210ENST00000482158 GRIN2CQ14957 1233 aa9.93□□□□□ -0.82
SF3B1-210ENST00000482158 CMTR1Q8N1G2 835 aaKnown RBP9.93□□□□□ -0.82
SF3B1-210ENST00000482158 GTPBP3Q969Y2 492 aaKnown RBP9.93□□□□□ -0.82
SF3B1-210ENST00000482158 DMRTB1Q96MA1 342 aa9.93□□□□□ -0.82
SF3B1-210ENST00000482158 DCDC2BA2VCK2 349 aa9.92□□□□□ -0.82
SF3B1-210ENST00000482158 KHNYNO15037 678 aaKnown RBP9.92□□□□□ -0.82
SF3B1-210ENST00000482158 MAPTP10636 758 aaKnown RBP9.92□□□□□ -0.82
SF3B1-210ENST00000482158 PDE3BQ13370 1112 aa9.92□□□□□ -0.82
SF3B1-210ENST00000482158 FBXO33Q7Z6M2 555 aa9.92□□□□□ -0.82
SF3B1-210ENST00000482158 TMC1Q8TDI8 760 aa9.92□□□□□ -0.82
SF3B1-210ENST00000482158 ZNF428Q96B54 188 aa9.92□□□□□ -0.82
SF3B1-210ENST00000482158 ALKBH8Q96BT7 664 aaKnown RBP9.92□□□□□ -0.82
SF3B1-210ENST00000482158 AMOTL2Q9Y2J4 779 aa9.92□□□□□ -0.82
SF3B1-210ENST00000482158 EGFRP00533 1210 aa9.91□□□□□ -0.82
SF3B1-210ENST00000482158 FMR1Q06787 632 aaKnown RBP eCLIP9.91□□□□□ -0.825e-7■□□□□ 8.6
SF3B1-210ENST00000482158 ABHD17AQ96GS6 310 aa9.91□□□□□ -0.82
SF3B1-210ENST00000482158 P4HBP07237 508 aaKnown RBP9.9□□□□□ -0.82
SF3B1-210ENST00000482158 PCSK2P16519 638 aa9.9□□□□□ -0.82
SF3B1-210ENST00000482158 TAGLNQ01995 201 aaKnown RBP9.9□□□□□ -0.82
SF3B1-210ENST00000482158 EHHADHQ08426 723 aa9.9□□□□□ -0.82
SF3B1-210ENST00000482158 C8orf34Q49A92 452 aa9.9□□□□□ -0.82
SF3B1-210ENST00000482158 XKR5Q6UX68 686 aa9.9□□□□□ -0.82
SF3B1-210ENST00000482158 VWA5B2Q8N398 1253 aa9.9□□□□□ -0.82
SF3B1-210ENST00000482158 NANOS1Q8WY41 292 aaKnown RBP9.9□□□□□ -0.82
SF3B1-210ENST00000482158 NIF3L1Q9GZT8 377 aa9.9□□□□□ -0.82
SF3B1-210ENST00000482158 KCNH4Q9UQ05 1017 aa9.9□□□□□ -0.82
SF3B1-210ENST00000482158 RBM47A0AV96 593 aaKnown RBP9.89□□□□□ -0.83
SF3B1-210ENST00000482158 RPLP1P05386 114 aaKnown RBP9.89□□□□□ -0.83
SF3B1-210ENST00000482158 EPB42P16452 691 aa9.89□□□□□ -0.83
SF3B1-210ENST00000482158 LAMC2Q13753 1193 aa9.89□□□□□ -0.83
SF3B1-210ENST00000482158 COL19A1Q14993 1142 aa9.89□□□□□ -0.83
SF3B1-210ENST00000482158 GSX2Q9BZM3 304 aa9.89□□□□□ -0.83
SF3B1-210ENST00000482158 UBAP1LF5GYI3 381 aa9.88□□□□□ -0.83
SF3B1-210ENST00000482158 GPR25O00155 361 aa9.88□□□□□ -0.83
SF3B1-210ENST00000482158 XYLBO75191 536 aa9.88□□□□□ -0.83
SF3B1-210ENST00000482158 PLCB3Q01970 1234 aa9.88□□□□□ -0.83
SF3B1-210ENST00000482158 C11orf16Q9NQ32 467 aa9.88□□□□□ -0.83
SF3B1-210ENST00000482158 ATXN7L1Q9ULK2 861 aaPredicted RBP9.88□□□□□ -0.83
SF3B1-210ENST00000482158 CD33P20138 364 aa9.87□□□□□ -0.83
SF3B1-210ENST00000482158 VEGFBP49765 207 aa9.87□□□□□ -0.83
SF3B1-210ENST00000482158 PDE12Q6L8Q7 609 aaKnown RBP9.87□□□□□ -0.83
SF3B1-210ENST00000482158 BCL2L13Q9BXK5 485 aa9.87□□□□□ -0.83
SF3B1-210ENST00000482158 CFHR5Q9BXR6 569 aa9.87□□□□□ -0.83
SF3B1-210ENST00000482158 TMEM63CQ9P1W3 806 aa9.87□□□□□ -0.83
SF3B1-210ENST00000482158 FNDC3AQ9Y2H6 1198 aaKnown RBP9.87□□□□□ -0.83
SF3B1-210ENST00000482158 CDC14CA4D256 554 aa9.86□□□□□ -0.83
SF3B1-210ENST00000482158 ZNF16P17020 682 aaPredicted RBP9.86□□□□□ -0.83
SF3B1-210ENST00000482158 ORC1Q13415 861 aa9.86□□□□□ -0.83
SF3B1-210ENST00000482158 SLC30A3Q99726 388 aa9.86□□□□□ -0.83
SF3B1-210ENST00000482158 ELP3Q9H9T3 547 aa9.86□□□□□ -0.83
SF3B1-210ENST00000482158 MARK1Q9P0L2 795 aa9.86□□□□□ -0.83
SF3B1-210ENST00000482158 NXF1Q9UBU9 619 aaKnown RBP9.86□□□□□ -0.83
SF3B1-210ENST00000482158 FOXD3Q9UJU5 478 aaPredicted RBP9.86□□□□□ -0.83
SF3B1-210ENST00000482158 TNFRSF21O75509 655 aa9.85□□□□□ -0.83
SF3B1-210ENST00000482158 FGFR3P22607 806 aa9.85□□□□□ -0.83
SF3B1-210ENST00000482158 SV2AQ7L0J3 742 aa9.85□□□□□ -0.83
SF3B1-210ENST00000482158 ZNF438Q7Z4V0 828 aa9.85□□□□□ -0.83
SF3B1-210ENST00000482158 GPR161Q8N6U8 529 aaKnown RBP9.85□□□□□ -0.83
SF3B1-210ENST00000482158 SETDB2Q96T68 719 aa9.85□□□□□ -0.83
SF3B1-210ENST00000482158 ZFATQ9P243 1243 aa9.85□□□□□ -0.83
SF3B1-210ENST00000482158 UNCXA6NJT0 531 aa9.84□□□□□ -0.83
SF3B1-210ENST00000482158 SASH3O75995 380 aa9.84□□□□□ -0.83
SF3B1-210ENST00000482158 TARSP26639 723 aaKnown RBP9.84□□□□□ -0.83
SF3B1-210ENST00000482158 CTBSQ01459 385 aa9.84□□□□□ -0.83
SF3B1-210ENST00000482158 CCINQ13939 588 aa9.84□□□□□ -0.83
SF3B1-210ENST00000482158 ENOX2Q16206 610 aaKnown RBP9.84□□□□□ -0.83
SF3B1-210ENST00000482158 EAPPQ56P03 285 aaPredicted RBP9.84□□□□□ -0.83
SF3B1-210ENST00000482158 GIPC2Q8TF65 315 aa9.84□□□□□ -0.83
SF3B1-210ENST00000482158 WWC3Q9ULE0 1092 aa9.84□□□□□ -0.83
SF3B1-210ENST00000482158 H3BM21 787 aa9.83□□□□□ -0.84
SF3B1-210ENST00000482158 MAPK8P45983 427 aa9.83□□□□□ -0.84
SF3B1-210ENST00000482158 SPEM2Q0P670 501 aa9.83□□□□□ -0.84
SF3B1-210ENST00000482158 GAS6Q14393 721 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 165.8 ms