RNA–Protein interactions for RNA: ENST00000481456.1

DDX39B-219, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 5,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-219ENST00000481456 ERO1AQ96HE7 468 aa13.4□□□□□ -0.26
DDX39B-219ENST00000481456 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.4□□□□□ -0.26
DDX39B-219ENST00000481456 V9GYY5 206 aaPredicted RBP13.4□□□□□ -0.26
DDX39B-219ENST00000481456 AXDND1Q5T1B0 1012 aaPredicted RBP13.4□□□□□ -0.26
DDX39B-219ENST00000481456 TRIM22Q8IYM9 498 aa13.4□□□□□ -0.26
DDX39B-219ENST00000481456 SGSM2O43147 1006 aa13.4□□□□□ -0.27
DDX39B-219ENST00000481456 ZNF75DP51815 510 aa13.4□□□□□ -0.27
DDX39B-219ENST00000481456 DMTNQ08495 405 aa13.4□□□□□ -0.27
DDX39B-219ENST00000481456 AOPEPQ8N6M6 819 aa13.4□□□□□ -0.27
DDX39B-219ENST00000481456 TSC1Q92574 1164 aa13.4□□□□□ -0.27
DDX39B-219ENST00000481456 SRRTQ9BXP5 876 aaKnown RBP13.4□□□□□ -0.27
DDX39B-219ENST00000481456 H0YHG0 523 aa13.39□□□□□ -0.27
DDX39B-219ENST00000481456 CCT2P78371 535 aaKnown RBP13.39□□□□□ -0.27
DDX39B-219ENST00000481456 ARHGAP29Q52LW3 1261 aa13.39□□□□□ -0.27
DDX39B-219ENST00000481456 UTP14CQ5TAP6 766 aaKnown RBP13.39□□□□□ -0.27
DDX39B-219ENST00000481456 MAP3K2Q9Y2U5 619 aa13.39□□□□□ -0.27
DDX39B-219ENST00000481456 SHROOM2Q13796 1616 aa13.39□□□□□ -0.27
DDX39B-219ENST00000481456 POTEB2H3BUK9 544 aa13.39□□□□□ -0.27
DDX39B-219ENST00000481456 KIF5CO60282 957 aa13.39□□□□□ -0.27
DDX39B-219ENST00000481456 TCEANC2Q96MN5 208 aa13.39□□□□□ -0.27
DDX39B-219ENST00000481456 KIAA0232Q92628 1395 aa13.39□□□□□ -0.27
DDX39B-219ENST00000481456 FAM135BQ49AJ0 1406 aa13.39□□□□□ -0.27
DDX39B-219ENST00000481456 BIN1O00499 593 aa13.39□□□□□ -0.27
DDX39B-219ENST00000481456 G2E3Q7L622 706 aa13.39□□□□□ -0.27
DDX39B-219ENST00000481456 TRERF1Q96PN7 1200 aa13.39□□□□□ -0.27
DDX39B-219ENST00000481456 CLSTN2Q9H4D0 955 aa13.39□□□□□ -0.27
DDX39B-219ENST00000481456 NLRP2Q9NX02 1062 aa13.39□□□□□ -0.27
DDX39B-219ENST00000481456 HYPKQ9NX55 129 aa13.39□□□□□ -0.27
DDX39B-219ENST00000481456 MTHFSDQ2M296 383 aaKnown RBP13.39□□□□□ -0.27
DDX39B-219ENST00000481456 NMIQ13287 307 aaPredicted RBP13.38□□□□□ -0.27
DDX39B-219ENST00000481456 JAKMIP3Q5VZ66 844 aa13.38□□□□□ -0.27
DDX39B-219ENST00000481456 MRPS27Q92552 414 aaKnown RBP13.38□□□□□ -0.27
DDX39B-219ENST00000481456 BRF1Q92994 677 aa13.38□□□□□ -0.27
DDX39B-219ENST00000481456 CBX8Q9HC52 389 aa13.38□□□□□ -0.27
DDX39B-219ENST00000481456 ACEP12821 1306 aa13.38□□□□□ -0.27
DDX39B-219ENST00000481456 CHAMP1Q96JM3 812 aa13.38□□□□□ -0.27
DDX39B-219ENST00000481456 EDC4Q6P2E9 1401 aaKnown RBP13.38□□□□□ -0.27
DDX39B-219ENST00000481456 FKBP4Q02790 459 aaKnown RBP eCLIP13.38□□□□□ -0.27
DDX39B-219ENST00000481456 MAPK8IP2Q13387 824 aaPredicted RBP13.38□□□□□ -0.27
DDX39B-219ENST00000481456 ZSCAN25Q6NSZ9 544 aa13.38□□□□□ -0.27
DDX39B-219ENST00000481456 E9PCH4 1651 aa13.38□□□□□ -0.27
DDX39B-219ENST00000481456 MADDQ8WXG6 1647 aa13.38□□□□□ -0.27
DDX39B-219ENST00000481456 CPA1P15085 419 aa13.38□□□□□ -0.27
DDX39B-219ENST00000481456 BBXQ8WY36 941 aaPredicted RBP13.38□□□□□ -0.27
DDX39B-219ENST00000481456 WASF1Q92558 559 aa13.38□□□□□ -0.27
DDX39B-219ENST00000481456 PDLIM2Q96JY6 352 aa13.37□□□□□ -0.27
DDX39B-219ENST00000481456 DNAI1Q9UI46 699 aa13.37□□□□□ -0.27
DDX39B-219ENST00000481456 PALD1Q9ULE6 856 aa13.37□□□□□ -0.27
DDX39B-219ENST00000481456 MAGEC2Q9UBF1 373 aaPredicted RBP13.37□□□□□ -0.27
DDX39B-219ENST00000481456 PTCH1Q13635 1447 aa13.37□□□□□ -0.27
DDX39B-219ENST00000481456 NAP1L1P55209 391 aaKnown RBP13.37□□□□□ -0.27
DDX39B-219ENST00000481456 CUL4AQ13619 759 aa13.36□□□□□ -0.27
DDX39B-219ENST00000481456 SIRT2Q8IXJ6 389 aa13.36□□□□□ -0.27
DDX39B-219ENST00000481456 ZNHIT6Q9NWK9 470 aaKnown RBP13.36□□□□□ -0.27
DDX39B-219ENST00000481456 Q6ZUG5 572 aa13.36□□□□□ -0.27
DDX39B-219ENST00000481456 OSBPL3Q9H4L5 887 aa13.36□□□□□ -0.27
DDX39B-219ENST00000481456 ALDH1L1O75891 902 aa13.36□□□□□ -0.27
DDX39B-219ENST00000481456 CDR1P51861 262 aa13.36□□□□□ -0.27
DDX39B-219ENST00000481456 IQCEQ6IPM2 695 aa13.36□□□□□ -0.27
DDX39B-219ENST00000481456 USHBP1Q8N6Y0 703 aa13.36□□□□□ -0.27
DDX39B-219ENST00000481456 KCNG4Q8TDN1 519 aa13.36□□□□□ -0.27
DDX39B-219ENST00000481456 CCDC148Q8NFR7 591 aa13.36□□□□□ -0.27
DDX39B-219ENST00000481456 CHPF2Q9P2E5 772 aa13.36□□□□□ -0.27
DDX39B-219ENST00000481456 TXLNAP40222 546 aa13.35□□□□□ -0.27
DDX39B-219ENST00000481456 GNG11P61952 73 aa13.35□□□□□ -0.27
DDX39B-219ENST00000481456 KIF4BQ2VIQ3 1234 aa13.35□□□□□ -0.27
DDX39B-219ENST00000481456 AMOTQ4VCS5 1084 aa13.35□□□□□ -0.27
DDX39B-219ENST00000481456 PNMA6EA0A0J9YXQ4 647 aa13.35□□□□□ -0.27
DDX39B-219ENST00000481456 CNNM3Q8NE01 707 aa13.35□□□□□ -0.27
DDX39B-219ENST00000481456 MYD88Q99836 296 aa13.35□□□□□ -0.27
DDX39B-219ENST00000481456 DEF6Q9H4E7 631 aa13.35□□□□□ -0.27
DDX39B-219ENST00000481456 CEP131Q9UPN4 1083 aa13.35□□□□□ -0.27
DDX39B-219ENST00000481456 UBASH3AP57075 661 aa13.35□□□□□ -0.27
DDX39B-219ENST00000481456 GOLGA8BA8MQT2 603 aa13.35□□□□□ -0.27
DDX39B-219ENST00000481456 MARCH6O60337 910 aa13.35□□□□□ -0.27
DDX39B-219ENST00000481456 RDXP35241 583 aaKnown RBP13.35□□□□□ -0.27
DDX39B-219ENST00000481456 CYB5RLQ6IPT4 315 aa13.35□□□□□ -0.27
DDX39B-219ENST00000481456 KLHL34Q8N239 644 aa13.35□□□□□ -0.27
DDX39B-219ENST00000481456 CEP126Q9P2H0 1117 aa13.35□□□□□ -0.27
DDX39B-219ENST00000481456 TTC21AQ8NDW8 1320 aa13.35□□□□□ -0.27
DDX39B-219ENST00000481456 LMAN1P49257 510 aa13.34□□□□□ -0.27
DDX39B-219ENST00000481456 ARFGAP3Q9NP61 516 aa13.34□□□□□ -0.27
DDX39B-219ENST00000481456 TATP17735 454 aaPredicted RBP13.34□□□□□ -0.27
DDX39B-219ENST00000481456 MCM3P25205 808 aa13.34□□□□□ -0.27
DDX39B-219ENST00000481456 SYT10Q6XYQ8 523 aa13.34□□□□□ -0.27
DDX39B-219ENST00000481456 FOXO3O43524 673 aa13.34□□□□□ -0.27
DDX39B-219ENST00000481456 USP8P40818 1118 aa13.34□□□□□ -0.27
DDX39B-219ENST00000481456 SKIDA1Q1XH10 827 aa13.34□□□□□ -0.27
DDX39B-219ENST00000481456 MAP9Q49MG5 647 aa13.34□□□□□ -0.27
DDX39B-219ENST00000481456 SLC26A8Q96RN1 970 aa13.34□□□□□ -0.27
DDX39B-219ENST00000481456 ASXL2Q76L83 1435 aa13.34□□□□□ -0.27
DDX39B-219ENST00000481456 POLR3DP05423 398 aaPredicted RBP13.34□□□□□ -0.27
DDX39B-219ENST00000481456 RRP12Q5JTH9 1297 aaKnown RBP13.34□□□□□ -0.27
DDX39B-219ENST00000481456 ATL3Q6DD88 541 aa13.34□□□□□ -0.27
DDX39B-219ENST00000481456 KIF2CQ99661 725 aa13.34□□□□□ -0.27
DDX39B-219ENST00000481456 KIAA0754O94854 1291 aa13.33□□□□□ -0.27
DDX39B-219ENST00000481456 IFIT1P09914 478 aaKnown RBP13.33□□□□□ -0.27
DDX39B-219ENST00000481456 ESCO1Q5FWF5 840 aa13.33□□□□□ -0.27
DDX39B-219ENST00000481456 TMX1Q9H3N1 280 aa13.33□□□□□ -0.27
DDX39B-219ENST00000481456 KIF1BO60333 1816 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms