RNA–Protein interactions for RNA: ENST00000480952.1

NDC1-202, Transcript of NDC1 transmembrane nucleoporin, humanhuman

TSL 3

Gene NDC1, Length 785 nt, Biotype processed transcript.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-202ENST00000480952 SCNN1DP51172 638 aa17.89■□□□□ 0.45
NDC1-202ENST00000480952 CST9Q5W186 159 aa17.89■□□□□ 0.45
NDC1-202ENST00000480952 USP50Q70EL3 339 aaPredicted RBP17.89■□□□□ 0.45
NDC1-202ENST00000480952 MCM10Q7L590 875 aa17.89■□□□□ 0.45
NDC1-202ENST00000480952 RPGRQ92834 1020 aaKnown RBP17.89■□□□□ 0.45
NDC1-202ENST00000480952 NYXQ9GZU5 481 aa17.89■□□□□ 0.45
NDC1-202ENST00000480952 TSKSQ9UJT2 592 aa17.89■□□□□ 0.45
NDC1-202ENST00000480952 MAP2K2P36507 400 aa17.88■□□□□ 0.45
NDC1-202ENST00000480952 CRY2Q49AN0 593 aa17.88■□□□□ 0.45
NDC1-202ENST00000480952 GRIPAP1Q4V328 841 aa17.88■□□□□ 0.45
NDC1-202ENST00000480952 NUTM1Q86Y26 1132 aa17.88■□□□□ 0.45
NDC1-202ENST00000480952 CFAP44Q96MT7 982 aa17.88■□□□□ 0.45
NDC1-202ENST00000480952 TLL2Q9Y6L7 1015 aa17.88■□□□□ 0.45
NDC1-202ENST00000480952 SIPA1L3O60292 1781 aaPredicted RBP17.88■□□□□ 0.45
NDC1-202ENST00000480952 COL3A1P02461 1466 aaPredicted RBP17.88■□□□□ 0.45
NDC1-202ENST00000480952 NGEFQ8N5V2 710 aa17.87■□□□□ 0.45
NDC1-202ENST00000480952 TCERG1O14776 1098 aaKnown RBP17.86■□□□□ 0.45
NDC1-202ENST00000480952 AOC2O75106 756 aa17.86■□□□□ 0.45
NDC1-202ENST00000480952 NIM1KQ8IY84 436 aa17.86■□□□□ 0.45
NDC1-202ENST00000480952 CFAP53Q96M91 514 aa17.86■□□□□ 0.45
NDC1-202ENST00000480952 RSPH6AQ9H0K4 717 aa17.86■□□□□ 0.45
NDC1-202ENST00000480952 HOXA10P31260 410 aaPredicted RBP17.85■□□□□ 0.45
NDC1-202ENST00000480952 SNED1Q8TER0 1413 aa17.85■□□□□ 0.45
NDC1-202ENST00000480952 ABCC12Q96J65 1359 aa17.84■□□□□ 0.45
NDC1-202ENST00000480952 CA12O43570 354 aa17.84■□□□□ 0.45
NDC1-202ENST00000480952 DCTN1Q14203 1278 aa17.84■□□□□ 0.45
NDC1-202ENST00000480952 RBM17Q96I25 401 aaKnown RBP17.84■□□□□ 0.45
NDC1-202ENST00000480952 TMX4Q9H1E5 349 aaPredicted RBP17.84■□□□□ 0.45
NDC1-202ENST00000480952 ADARB2Q9NS39 739 aaKnown RBP17.84■□□□□ 0.45
NDC1-202ENST00000480952 NUDCQ9Y266 331 aa17.84■□□□□ 0.45
NDC1-202ENST00000480952 ERVV-1B6SEH8 477 aa17.83■□□□□ 0.44
NDC1-202ENST00000480952 PPEF1O14829 653 aaPredicted RBP17.83■□□□□ 0.44
NDC1-202ENST00000480952 CELF2O95319 508 aaKnown RBP17.83■□□□□ 0.44
NDC1-202ENST00000480952 SAPCD2Q86UD0 394 aa17.83■□□□□ 0.44
NDC1-202ENST00000480952 MCOLN1Q9GZU1 580 aa17.83■□□□□ 0.44
NDC1-202ENST00000480952 PCDH10Q9P2E7 1040 aa17.83■□□□□ 0.44
NDC1-202ENST00000480952 PPIP5K2O43314 1243 aa17.82■□□□□ 0.44
NDC1-202ENST00000480952 U2AF1L5P0DN76 240 aaPredicted RBP17.82■□□□□ 0.44
NDC1-202ENST00000480952 U2AF1Q01081 240 aaKnown RBP eCLIP17.82■□□□□ 0.44
NDC1-202ENST00000480952 TAF7Q15545 349 aaPredicted RBP17.82■□□□□ 0.44
NDC1-202ENST00000480952 KIF6Q6ZMV9 814 aa17.82■□□□□ 0.44
NDC1-202ENST00000480952 CRAMP1Q96RY5 1269 aa17.82■□□□□ 0.44
NDC1-202ENST00000480952 MIS18AQ9NYP9 233 aa17.82■□□□□ 0.44
NDC1-202ENST00000480952 GPRC5DQ9NZD1 345 aa17.82■□□□□ 0.44
NDC1-202ENST00000480952 COL4A5P29400 1685 aa17.82■□□□□ 0.44
NDC1-202ENST00000480952 NPC1L1Q9UHC9 1359 aa17.81■□□□□ 0.44
NDC1-202ENST00000480952 MAP3K15Q6ZN16 1313 aa17.81■□□□□ 0.44
NDC1-202ENST00000480952 HTATSF1O43719 755 aaKnown RBP17.81■□□□□ 0.44
NDC1-202ENST00000480952 GPTP24298 496 aa17.81■□□□□ 0.44
NDC1-202ENST00000480952 RRP7AQ9Y3A4 280 aaKnown RBP17.81■□□□□ 0.44
NDC1-202ENST00000480952 LTBP1Q14766 1721 aa17.81■□□□□ 0.44
NDC1-202ENST00000480952 AOC3Q16853 763 aa17.8■□□□□ 0.44
NDC1-202ENST00000480952 SUSD4Q5VX71 490 aa17.8■□□□□ 0.44
NDC1-202ENST00000480952 ZNF408Q9H9D4 720 aa17.8■□□□□ 0.44
NDC1-202ENST00000480952 BRPF1P55201 1214 aaPredicted RBP17.79■□□□□ 0.44
NDC1-202ENST00000480952 CXCL9Q07325 125 aa17.79■□□□□ 0.44
NDC1-202ENST00000480952 DGKZQ13574 1117 aa17.79■□□□□ 0.44
NDC1-202ENST00000480952 SLC51AQ86UW1 340 aa17.79■□□□□ 0.44
NDC1-202ENST00000480952 HHIPL1Q96JK4 782 aa17.79■□□□□ 0.44
NDC1-202ENST00000480952 GLIS2Q9BZE0 524 aaPredicted RBP17.79■□□□□ 0.44
NDC1-202ENST00000480952 VPS33BQ9H267 617 aa17.79■□□□□ 0.44
NDC1-202ENST00000480952 ZNRF3Q9ULT6 936 aa17.79■□□□□ 0.44
NDC1-202ENST00000480952 THSD7BQ9C0I4 1608 aa17.79■□□□□ 0.44
NDC1-202ENST00000480952 MYL6BP14649 208 aa17.78■□□□□ 0.44
NDC1-202ENST00000480952 GMPSP49915 693 aaPredicted RBP17.78■□□□□ 0.44
NDC1-202ENST00000480952 TTLL7Q6ZT98 887 aa17.78■□□□□ 0.44
NDC1-202ENST00000480952 ZBTB3Q9H5J0 574 aa17.78■□□□□ 0.44
NDC1-202ENST00000480952 UBN2Q6ZU65 1347 aa17.77■□□□□ 0.44
NDC1-202ENST00000480952 CIAPIN1Q6FI81 312 aa17.77■□□□□ 0.44
NDC1-202ENST00000480952 SUPT20HQ8NEM7 779 aa17.77■□□□□ 0.44
NDC1-202ENST00000480952 NLRP3Q96P20 1036 aa17.77■□□□□ 0.44
NDC1-202ENST00000480952 BCL2L13Q9BXK5 485 aa17.77■□□□□ 0.44
NDC1-202ENST00000480952 ATP6V0A2Q9Y487 856 aa17.77■□□□□ 0.44
NDC1-202ENST00000480952 C3orf67Q6ZVT6 689 aa17.76■□□□□ 0.43
NDC1-202ENST00000480952 PPP1R42Q7Z4L9 355 aa17.76■□□□□ 0.43
NDC1-202ENST00000480952 ZNF34Q8IZ26 560 aa17.76■□□□□ 0.43
NDC1-202ENST00000480952 CCER1Q8TC90 406 aaPredicted RBP17.76■□□□□ 0.43
NDC1-202ENST00000480952 PNISRQ8TF01 805 aaKnown RBP17.76■□□□□ 0.43
NDC1-202ENST00000480952 ZC3H15Q8WU90 426 aaKnown RBP17.76■□□□□ 0.43
NDC1-202ENST00000480952 PGAP2Q9UHJ9 254 aa17.76■□□□□ 0.43
NDC1-202ENST00000480952 IBTKQ9P2D0 1353 aaPredicted RBP17.76■□□□□ 0.43
NDC1-202ENST00000480952 RIC1Q4ADV7 1423 aa17.75■□□□□ 0.43
NDC1-202ENST00000480952 CDC37L1Q7L3B6 337 aa17.75■□□□□ 0.43
NDC1-202ENST00000480952 NTSR2O95665 410 aa17.74■□□□□ 0.43
NDC1-202ENST00000480952 NOGQ13253 232 aa17.74■□□□□ 0.43
NDC1-202ENST00000480952 TNIP1Q15025 636 aa17.74■□□□□ 0.43
NDC1-202ENST00000480952 DPP8Q6V1X1 898 aaPredicted RBP17.74■□□□□ 0.43
NDC1-202ENST00000480952 RAD17O75943 681 aa17.73■□□□□ 0.43
NDC1-202ENST00000480952 HIRAP54198 1017 aaPredicted RBP17.73■□□□□ 0.43
NDC1-202ENST00000480952 GIGYF2Q6Y7W6 1299 aaKnown RBP17.73■□□□□ 0.43
NDC1-202ENST00000480952 RTFDC1Q9BY42 306 aaPredicted RBP17.73■□□□□ 0.43
NDC1-202ENST00000480952 TRPM7Q96QT4 1865 aa17.73■□□□□ 0.43
NDC1-202ENST00000480952 BBOX1O75936 387 aa17.72■□□□□ 0.43
NDC1-202ENST00000480952 HUNKP57058 714 aa17.72■□□□□ 0.43
NDC1-202ENST00000480952 EIF4A1P60842 406 aaKnown RBP17.72■□□□□ 0.43
NDC1-202ENST00000480952 PARP10Q53GL7 1025 aa17.72■□□□□ 0.43
NDC1-202ENST00000480952 MPNDQ8N594 471 aa17.72■□□□□ 0.43
NDC1-202ENST00000480952 UTP14AQ9BVJ6 771 aaKnown RBP17.72■□□□□ 0.43
NDC1-202ENST00000480952 ABCC4O15439 1325 aa17.72■□□□□ 0.43
NDC1-202ENST00000480952 CDHR2Q9BYE9 1310 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms