RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 HOXA10P31260 410 aaPredicted RBP24.68■■□□□ 1.54
ABCF3-214ENST00000480562 KRT24Q2M2I5 525 aa24.68■■□□□ 1.54
ABCF3-214ENST00000480562 RIC1Q4ADV7 1423 aa24.68■■□□□ 1.54
ABCF3-214ENST00000480562 WDR43Q15061 677 aaKnown RBP eCLIP24.67■■□□□ 1.54
ABCF3-214ENST00000480562 PPP1R42Q7Z4L9 355 aa24.67■■□□□ 1.54
ABCF3-214ENST00000480562 SLC51AQ86UW1 340 aa24.67■■□□□ 1.54
ABCF3-214ENST00000480562 L3MBTL3Q96JM7 780 aaPredicted RBP24.67■■□□□ 1.54
ABCF3-214ENST00000480562 LAS1LQ9Y4W2 734 aaKnown RBP24.67■■□□□ 1.54
ABCF3-214ENST00000480562 SNED1Q8TER0 1413 aa24.67■■□□□ 1.54
ABCF3-214ENST00000480562 IQCA1LA6NCM1 817 aa24.66■■□□□ 1.54
ABCF3-214ENST00000480562 TCERG1O14776 1098 aaKnown RBP24.66■■□□□ 1.54
ABCF3-214ENST00000480562 AIMP1Q12904 312 aaKnown RBP24.66■■□□□ 1.54
ABCF3-214ENST00000480562 PARP10Q53GL7 1025 aa24.66■■□□□ 1.54
ABCF3-214ENST00000480562 COPS6Q7L5N1 327 aa24.66■■□□□ 1.54
ABCF3-214ENST00000480562 RUNDC1Q96C34 613 aa24.66■■□□□ 1.54
ABCF3-214ENST00000480562 RBM17Q96I25 401 aaKnown RBP24.66■■□□□ 1.54
ABCF3-214ENST00000480562 TAF1DQ9H5J8 278 aaPredicted RBP24.66■■□□□ 1.54
ABCF3-214ENST00000480562 TRIM35Q9UPQ4 493 aa24.66■■□□□ 1.54
ABCF3-214ENST00000480562 CHL1O00533 1208 aa24.65■■□□□ 1.54
ABCF3-214ENST00000480562 XAGE3Q8WTP9 111 aa24.65■■□□□ 1.54
ABCF3-214ENST00000480562 PSMD1Q99460 953 aa24.65■■□□□ 1.54
ABCF3-214ENST00000480562 UTP14AQ9BVJ6 771 aaKnown RBP24.65■■□□□ 1.54
ABCF3-214ENST00000480562 ADAMTS8Q9UP79 889 aa24.65■■□□□ 1.54
ABCF3-214ENST00000480562 CC2D2BQ6DHV5 1058 aa24.64■■□□□ 1.54
ABCF3-214ENST00000480562 CRAMP1Q96RY5 1269 aa24.64■■□□□ 1.54
ABCF3-214ENST00000480562 FZD9O00144 591 aa24.63■■□□□ 1.53
ABCF3-214ENST00000480562 PPEF1O14829 653 aaPredicted RBP24.63■■□□□ 1.53
ABCF3-214ENST00000480562 SCN4AP35499 1836 aa24.63■■□□□ 1.53
ABCF3-214ENST00000480562 PCNTO95613 3336 aa24.62■■□□□ 1.53
ABCF3-214ENST00000480562 EAPPQ56P03 285 aaPredicted RBP24.62■■□□□ 1.53
ABCF3-214ENST00000480562 LDHDQ86WU2 507 aa24.62■■□□□ 1.53
ABCF3-214ENST00000480562 JDP2Q8WYK2 163 aa24.62■■□□□ 1.53
ABCF3-214ENST00000480562 NLRP3Q96P20 1036 aa24.62■■□□□ 1.53
ABCF3-214ENST00000480562 HACL1Q9UJ83 578 aa24.62■■□□□ 1.53
ABCF3-214ENST00000480562 SLC10A5Q5PT55 438 aa24.61■■□□□ 1.53
ABCF3-214ENST00000480562 DDX21Q9NR30 783 aaKnown RBP eCLIP24.61■■□□□ 1.53
ABCF3-214ENST00000480562 COL4A5P29400 1685 aa24.6■■□□□ 1.53
ABCF3-214ENST00000480562 RNF123Q5XPI4 1314 aa24.6■■□□□ 1.53
ABCF3-214ENST00000480562 EPHX2P34913 555 aa24.59■■□□□ 1.53
ABCF3-214ENST00000480562 HSP90AB3PQ58FF7 597 aa24.59■■□□□ 1.53
ABCF3-214ENST00000480562 NLRP10Q86W26 655 aa24.59■■□□□ 1.53
ABCF3-214ENST00000480562 ZNF428Q96B54 188 aa24.59■■□□□ 1.53
ABCF3-214ENST00000480562 CHPF2Q9P2E5 772 aa24.59■■□□□ 1.53
ABCF3-214ENST00000480562 HCLS1P14317 486 aaPredicted RBP24.58■■□□□ 1.53
ABCF3-214ENST00000480562 TCIRG1Q13488 830 aa24.58■■□□□ 1.53
ABCF3-214ENST00000480562 GPC2Q8N158 579 aa24.58■■□□□ 1.53
ABCF3-214ENST00000480562 PRKRIP1Q9H875 184 aaPredicted RBP24.58■■□□□ 1.53
ABCF3-214ENST00000480562 CREBZFQ9NS37 354 aa24.58■■□□□ 1.53
ABCF3-214ENST00000480562 CLEC11AQ9Y240 323 aa24.58■■□□□ 1.53
ABCF3-214ENST00000480562 GJA3Q9Y6H8 435 aa24.58■■□□□ 1.53
ABCF3-214ENST00000480562 ANKRD36CQ5JPF3 1778 aa24.57■■□□□ 1.52
ABCF3-214ENST00000480562 EIF6P56537 245 aaKnown RBP24.57■■□□□ 1.52
ABCF3-214ENST00000480562 GRIPAP1Q4V328 841 aa24.57■■□□□ 1.52
ABCF3-214ENST00000480562 LARGE2Q8N3Y3 721 aa24.57■■□□□ 1.52
ABCF3-214ENST00000480562 ABCC4O15439 1325 aa24.57■■□□□ 1.52
ABCF3-214ENST00000480562 COL13A1Q5TAT6 717 aaPredicted RBP24.56■■□□□ 1.52
ABCF3-214ENST00000480562 HDGFL1Q5TGJ6 251 aa24.56■■□□□ 1.52
ABCF3-214ENST00000480562 MKRN1Q9UHC7 482 aaKnown RBP24.56■■□□□ 1.52
ABCF3-214ENST00000480562 TRMT112Q9UI30 125 aaKnown RBP24.56■■□□□ 1.52
ABCF3-214ENST00000480562 ATP6V0A2Q9Y487 856 aa24.56■■□□□ 1.52
ABCF3-214ENST00000480562 PASKQ96RG2 1323 aa24.56■■□□□ 1.52
ABCF3-214ENST00000480562 ITGBL1O95965 494 aaPredicted RBP24.54■■□□□ 1.52
ABCF3-214ENST00000480562 CFAP44Q96MT7 982 aa24.54■■□□□ 1.52
ABCF3-214ENST00000480562 TMX4Q9H1E5 349 aaPredicted RBP24.54■■□□□ 1.52
ABCF3-214ENST00000480562 PPIP5K2O43314 1243 aa24.53■■□□□ 1.52
ABCF3-214ENST00000480562 HSPA1AP0DMV8 641 aaKnown RBP24.53■■□□□ 1.52
ABCF3-214ENST00000480562 HSPA1BP0DMV9 641 aaKnown RBP24.53■■□□□ 1.52
ABCF3-214ENST00000480562 PNMA8AQ86V59 439 aaPredicted RBP24.53■■□□□ 1.52
ABCF3-214ENST00000480562 LAMB2P55268 1798 aa24.52■■□□□ 1.52
ABCF3-214ENST00000480562 HOXB7P09629 217 aa24.52■■□□□ 1.52
ABCF3-214ENST00000480562 DUSP27Q5VZP5 1158 aa24.52■■□□□ 1.52
ABCF3-214ENST00000480562 MAP1SQ66K74 1059 aaPredicted RBP24.52■■□□□ 1.52
ABCF3-214ENST00000480562 NIM1KQ8IY84 436 aa24.52■■□□□ 1.52
ABCF3-214ENST00000480562 PLBD2Q8NHP8 589 aa24.52■■□□□ 1.52
ABCF3-214ENST00000480562 MBIPQ9NS73 344 aa24.52■■□□□ 1.52
ABCF3-214ENST00000480562 SH3TC1Q8TE82 1336 aa24.52■■□□□ 1.52
ABCF3-214ENST00000480562 ADAMTSL1Q8N6G6 1762 aa24.52■■□□□ 1.52
ABCF3-214ENST00000480562 APAF1O14727 1248 aa24.51■■□□□ 1.51
ABCF3-214ENST00000480562 AOC3Q16853 763 aa24.51■■□□□ 1.51
ABCF3-214ENST00000480562 ANKRD13DQ6ZTN6 518 aa24.51■■□□□ 1.51
ABCF3-214ENST00000480562 DBF4Q9UBU7 674 aaPredicted RBP24.51■■□□□ 1.51
ABCF3-214ENST00000480562 BBOX1O75936 387 aa24.5■■□□□ 1.51
ABCF3-214ENST00000480562 DDX46Q7L014 1031 aaKnown RBP24.5■■□□□ 1.51
ABCF3-214ENST00000480562 CNTROBQ8N137 903 aa24.5■■□□□ 1.51
ABCF3-214ENST00000480562 ATP5J2-PTCD1G3V325 749 aa24.49■■□□□ 1.51
ABCF3-214ENST00000480562 LMOD1P29536 600 aaPredicted RBP24.49■■□□□ 1.51
ABCF3-214ENST00000480562 SCNN1DP51172 638 aa24.49■■□□□ 1.51
ABCF3-214ENST00000480562 SP8Q8IXZ3 490 aa24.49■■□□□ 1.51
ABCF3-214ENST00000480562 LTBP1Q14766 1721 aa24.49■■□□□ 1.51
ABCF3-214ENST00000480562 TMEM88BA6NKF7 163 aa24.48■■□□□ 1.51
ABCF3-214ENST00000480562 EPS15P42566 896 aa24.48■■□□□ 1.51
ABCF3-214ENST00000480562 DPP8Q6V1X1 898 aaPredicted RBP24.48■■□□□ 1.51
ABCF3-214ENST00000480562 ISCA1Q9BUE6 129 aa24.48■■□□□ 1.51
ABCF3-214ENST00000480562 CNTNAP1P78357 1384 aa24.47■■□□□ 1.51
ABCF3-214ENST00000480562 ZNF853P0CG23 659 aa24.47■■□□□ 1.51
ABCF3-214ENST00000480562 GRAPQ13588 217 aa24.47■■□□□ 1.51
ABCF3-214ENST00000480562 MPNDQ8N594 471 aa24.47■■□□□ 1.51
ABCF3-214ENST00000480562 SUPT20HQ8NEM7 779 aa24.47■■□□□ 1.51
ABCF3-214ENST00000480562 GRAPLQ8TC17 118 aaPredicted RBP24.47■■□□□ 1.51
ABCF3-214ENST00000480562 RTFDC1Q9BY42 306 aaPredicted RBP24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms