RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-223ENST00000480525 ATF5Q9Y2D1 282 aaPredicted RBP6.49□□□□□ -1.37
HDAC6-223ENST00000480525 LTBP1Q14766 1721 aa6.49□□□□□ -1.37
HDAC6-223ENST00000480525 SNED1Q8TER0 1413 aa6.49□□□□□ -1.37
HDAC6-223ENST00000480525 GOLGB1Q14789 3259 aaKnown RBP6.49□□□□□ -1.37
HDAC6-223ENST00000480525 LTBP3Q9NS15 1303 aa6.49□□□□□ -1.37
HDAC6-223ENST00000480525 PI4KAP2A4QPH2 592 aa6.48□□□□□ -1.37
HDAC6-223ENST00000480525 IPO8O15397 1037 aaKnown RBP6.48□□□□□ -1.37
HDAC6-223ENST00000480525 PCCAP05165 728 aaPredicted RBP6.48□□□□□ -1.37
HDAC6-223ENST00000480525 SRGNP10124 158 aa6.48□□□□□ -1.37
HDAC6-223ENST00000480525 RARSP54136 660 aaKnown RBP6.48□□□□□ -1.37
HDAC6-223ENST00000480525 SF3B3Q15393 1217 aaKnown RBP6.48□□□□□ -1.37
HDAC6-223ENST00000480525 HLFQ16534 295 aa6.48□□□□□ -1.37
HDAC6-223ENST00000480525 MRPL50Q8N5N7 158 aaKnown RBP6.48□□□□□ -1.37
HDAC6-223ENST00000480525 PI4KAP1Q8N8J0 262 aa6.48□□□□□ -1.37
HDAC6-223ENST00000480525 DNAAF4Q8WXU2 420 aa6.48□□□□□ -1.37
HDAC6-223ENST00000480525 CNKSR1Q969H4 720 aa6.48□□□□□ -1.37
HDAC6-223ENST00000480525 UTP14AQ9BVJ6 771 aaKnown RBP6.48□□□□□ -1.37
HDAC6-223ENST00000480525 API5Q9BZZ5 524 aaKnown RBP6.48□□□□□ -1.37
HDAC6-223ENST00000480525 VPS33BQ9H267 617 aa6.48□□□□□ -1.37
HDAC6-223ENST00000480525 SLX4Q8IY92 1834 aa6.48□□□□□ -1.37
HDAC6-223ENST00000480525 CACNA1SQ13698 1873 aa6.47□□□□□ -1.37
HDAC6-223ENST00000480525 DCAF8L1A6NGE4 600 aa6.47□□□□□ -1.37
HDAC6-223ENST00000480525 NEURL1BA8MQ27 555 aa6.47□□□□□ -1.37
HDAC6-223ENST00000480525 H0YIN7 160 aa6.47□□□□□ -1.37
HDAC6-223ENST00000480525 ZBTB22O15209 634 aa6.47□□□□□ -1.37
HDAC6-223ENST00000480525 MS4A1P11836 297 aa6.47□□□□□ -1.37
HDAC6-223ENST00000480525 NPR1P16066 1061 aa6.47□□□□□ -1.37
HDAC6-223ENST00000480525 KCNA3P22001 575 aa6.47□□□□□ -1.37
HDAC6-223ENST00000480525 ALDH1B1P30837 517 aa6.47□□□□□ -1.37
HDAC6-223ENST00000480525 FKBP5Q13451 457 aaPredicted RBP6.47□□□□□ -1.37
HDAC6-223ENST00000480525 RIC3Q7Z5B4 369 aa6.47□□□□□ -1.37
HDAC6-223ENST00000480525 SSH1Q8WYL5 1049 aa6.47□□□□□ -1.37
HDAC6-223ENST00000480525 CDCA7LQ96GN5 454 aa6.47□□□□□ -1.37
HDAC6-223ENST00000480525 MASTLQ96GX5 879 aa6.47□□□□□ -1.37
HDAC6-223ENST00000480525 CRAMP1Q96RY5 1269 aa6.47□□□□□ -1.37
HDAC6-223ENST00000480525 ZBTB3Q9H5J0 574 aa6.47□□□□□ -1.37
HDAC6-223ENST00000480525 PHAXQ9H814 394 aaKnown RBP6.47□□□□□ -1.37
HDAC6-223ENST00000480525 CWC25Q9NXE8 425 aaPredicted RBP6.47□□□□□ -1.37
HDAC6-223ENST00000480525 PIM2Q9P1W9 311 aa6.47□□□□□ -1.37
HDAC6-223ENST00000480525 PSME4Q14997 1843 aa6.47□□□□□ -1.37
HDAC6-223ENST00000480525 ABCC4O15439 1325 aa6.47□□□□□ -1.37
HDAC6-223ENST00000480525 A0A1B0GUL6 1792 aa6.46□□□□□ -1.37
HDAC6-223ENST00000480525 UTRNP46939 3433 aa6.46□□□□□ -1.37
HDAC6-223ENST00000480525 H7C1W4 665 aa6.46□□□□□ -1.38
HDAC6-223ENST00000480525 ELL2O00472 640 aaPredicted RBP6.46□□□□□ -1.38
HDAC6-223ENST00000480525 IGKV5-2P06315 115 aa6.46□□□□□ -1.38
HDAC6-223ENST00000480525 CCT4P50991 539 aaKnown RBP6.46□□□□□ -1.38
HDAC6-223ENST00000480525 GCKRQ14397 625 aa6.46□□□□□ -1.38
HDAC6-223ENST00000480525 CCDC88AQ3V6T2 1871 aa6.46□□□□□ -1.38
HDAC6-223ENST00000480525 BEND3Q5T5X7 828 aa6.46□□□□□ -1.38
HDAC6-223ENST00000480525 SUSD4Q5VX71 490 aa6.46□□□□□ -1.38
HDAC6-223ENST00000480525 MSL1Q68DK7 614 aa6.46□□□□□ -1.38
HDAC6-223ENST00000480525 INTS3Q68E01 1043 aaKnown RBP6.46□□□□□ -1.38
HDAC6-223ENST00000480525 NLRP3Q96P20 1036 aa6.46□□□□□ -1.38
HDAC6-223ENST00000480525 MAP3K2Q9Y2U5 619 aa6.46□□□□□ -1.38
HDAC6-223ENST00000480525 ZNF330Q9Y3S2 320 aaPredicted RBP6.46□□□□□ -1.38
HDAC6-223ENST00000480525 ABCC12Q96J65 1359 aa6.45□□□□□ -1.38
HDAC6-223ENST00000480525 ZNF609O15014 1411 aa6.45□□□□□ -1.38
HDAC6-223ENST00000480525 PDE8AO60658 829 aa6.45□□□□□ -1.38
HDAC6-223ENST00000480525 BBOX1O75936 387 aa6.45□□□□□ -1.38
HDAC6-223ENST00000480525 ANXA1P04083 346 aa6.45□□□□□ -1.38
HDAC6-223ENST00000480525 CSF1RP07333 972 aa6.45□□□□□ -1.38
HDAC6-223ENST00000480525 PIP4K2AP48426 406 aaPredicted RBP6.45□□□□□ -1.38
HDAC6-223ENST00000480525 CASP7P55210 303 aa6.45□□□□□ -1.38
HDAC6-223ENST00000480525 AAMPQ13685 434 aa6.45□□□□□ -1.38
HDAC6-223ENST00000480525 RABL6Q3YEC7 729 aaPredicted RBP6.45□□□□□ -1.38
HDAC6-223ENST00000480525 TTLL6Q8N841 843 aa6.45□□□□□ -1.38
HDAC6-223ENST00000480525 C7orf43Q8WVR3 580 aa6.45□□□□□ -1.38
HDAC6-223ENST00000480525 SRCIN1Q9C0H9 1055 aa6.45□□□□□ -1.38
HDAC6-223ENST00000480525 CHMP4BQ9H444 224 aaKnown RBP6.45□□□□□ -1.38
HDAC6-223ENST00000480525 SMC4Q9NTJ3 1288 aa6.45□□□□□ -1.38
HDAC6-223ENST00000480525 TRMT112Q9UI30 125 aaKnown RBP6.45□□□□□ -1.38
HDAC6-223ENST00000480525 FBXO3Q9UK99 471 aa6.45□□□□□ -1.38
HDAC6-223ENST00000480525 GRM8O00222 908 aa6.44□□□□□ -1.38
HDAC6-223ENST00000480525 AIMP1Q12904 312 aaKnown RBP6.44□□□□□ -1.38
HDAC6-223ENST00000480525 MTX1Q13505 466 aa6.44□□□□□ -1.38
HDAC6-223ENST00000480525 PDE3AQ14432 1141 aa6.44□□□□□ -1.38
HDAC6-223ENST00000480525 DALRD3Q5D0E6 543 aaKnown RBP6.44□□□□□ -1.38
HDAC6-223ENST00000480525 ZKSCAN2Q63HK3 967 aa6.44□□□□□ -1.38
HDAC6-223ENST00000480525 ATF7IPQ6VMQ6 1270 aa6.44□□□□□ -1.38
HDAC6-223ENST00000480525 SMIM5Q71RC9 77 aa6.44□□□□□ -1.38
HDAC6-223ENST00000480525 G2E3Q7L622 706 aa6.44□□□□□ -1.38
HDAC6-223ENST00000480525 PSMD1Q99460 953 aa6.44□□□□□ -1.38
HDAC6-223ENST00000480525 SALL2Q9Y467 1007 aaPredicted RBP6.44□□□□□ -1.38
HDAC6-223ENST00000480525 SCN4AP35499 1836 aa6.43□□□□□ -1.38
HDAC6-223ENST00000480525 TIAM2Q8IVF5 1701 aa6.43□□□□□ -1.38
HDAC6-223ENST00000480525 IRS4O14654 1257 aaPredicted RBP6.43□□□□□ -1.38
HDAC6-223ENST00000480525 DPEP1P16444 411 aa6.43□□□□□ -1.38
HDAC6-223ENST00000480525 GTF2E1P29083 439 aaPredicted RBP6.43□□□□□ -1.38
HDAC6-223ENST00000480525 ERFEQ4G0M1 354 aa6.43□□□□□ -1.38
HDAC6-223ENST00000480525 CCDC152Q4G0S7 254 aa6.43□□□□□ -1.38
HDAC6-223ENST00000480525 C2CD5Q86YS7 1000 aa6.43□□□□□ -1.38
HDAC6-223ENST00000480525 RTKN2Q8IZC4 609 aa6.43□□□□□ -1.38
HDAC6-223ENST00000480525 NLGN2Q8NFZ4 835 aa6.43□□□□□ -1.38
HDAC6-223ENST00000480525 RBM17Q96I25 401 aaKnown RBP6.43□□□□□ -1.38
HDAC6-223ENST00000480525 MYD88Q99836 296 aa6.43□□□□□ -1.38
HDAC6-223ENST00000480525 RTFDC1Q9BY42 306 aaPredicted RBP6.43□□□□□ -1.38
HDAC6-223ENST00000480525 PODXL2Q9NZ53 605 aa6.43□□□□□ -1.38
HDAC6-223ENST00000480525 NPHP1O15259 732 aa6.42□□□□□ -1.38
HDAC6-223ENST00000480525 GNAI3P08754 354 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms