RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 ATP5J2-PTCD1G3V325 749 aa25.13■■□□□ 1.61
LIME1-205ENST00000480139 FAM177BA6PVY3 158 aa25.12■■□□□ 1.61
LIME1-205ENST00000480139 NLGN2Q8NFZ4 835 aa25.12■■□□□ 1.61
LIME1-205ENST00000480139 PDZRN3Q9UPQ7 1066 aa25.12■■□□□ 1.61
LIME1-205ENST00000480139 LAMB2P55268 1798 aa25.12■■□□□ 1.61
LIME1-205ENST00000480139 BRCA1P38398 1863 aaKnown RBP25.12■■□□□ 1.61
LIME1-205ENST00000480139 IGKV5-2P06315 115 aa25.11■■□□□ 1.61
LIME1-205ENST00000480139 GTF2E1P29083 439 aaPredicted RBP25.11■■□□□ 1.61
LIME1-205ENST00000480139 LINS1Q8NG48 757 aa25.11■■□□□ 1.61
LIME1-205ENST00000480139 TNRC6CQ9HCJ0 1690 aaKnown RBP25.1■■□□□ 1.61
LIME1-205ENST00000480139 ABCC12Q96J65 1359 aa25.1■■□□□ 1.61
LIME1-205ENST00000480139 COL11A2P13942 1736 aaPredicted RBP25.1■■□□□ 1.61
LIME1-205ENST00000480139 PDE6BP35913 854 aa25.1■■□□□ 1.61
LIME1-205ENST00000480139 ARHGAP45Q92619 1136 aa25.1■■□□□ 1.61
LIME1-205ENST00000480139 CWC25Q9NXE8 425 aaPredicted RBP25.1■■□□□ 1.61
LIME1-205ENST00000480139 TRMT112Q9UI30 125 aaKnown RBP25.1■■□□□ 1.61
LIME1-205ENST00000480139 NEURL1BA8MQ27 555 aa25.09■■□□□ 1.61
LIME1-205ENST00000480139 F6X3S4 739 aa25.09■■□□□ 1.61
LIME1-205ENST00000480139 ERFEQ4G0M1 354 aa25.09■■□□□ 1.61
LIME1-205ENST00000480139 NUTM1Q86Y26 1132 aa25.09■■□□□ 1.61
LIME1-205ENST00000480139 SH3TC1Q8TE82 1336 aa25.09■■□□□ 1.61
LIME1-205ENST00000480139 DDX60Q8IY21 1712 aaKnown RBP25.09■■□□□ 1.61
LIME1-205ENST00000480139 KLRG2A4D1S0 409 aaPredicted RBP25.08■■□□□ 1.61
LIME1-205ENST00000480139 SLC10A5Q5PT55 438 aa25.08■■□□□ 1.61
LIME1-205ENST00000480139 BEND3Q5T5X7 828 aa25.08■■□□□ 1.61
LIME1-205ENST00000480139 NOB1Q9ULX3 412 aaKnown RBP25.08■■□□□ 1.61
LIME1-205ENST00000480139 BCAR3O75815 825 aa25.07■■□□□ 1.6
LIME1-205ENST00000480139 CWF19L2Q2TBE0 894 aaKnown RBP25.07■■□□□ 1.6
LIME1-205ENST00000480139 CCDC24Q8N4L8 307 aa25.07■■□□□ 1.6
LIME1-205ENST00000480139 ZBTB38Q8NAP3 1195 aaPredicted RBP25.07■■□□□ 1.6
LIME1-205ENST00000480139 API5Q9BZZ5 524 aaKnown RBP25.07■■□□□ 1.6
LIME1-205ENST00000480139 PCCAP05165 728 aaPredicted RBP25.06■■□□□ 1.6
LIME1-205ENST00000480139 IPO8O15397 1037 aaKnown RBP25.05■■□□□ 1.6
LIME1-205ENST00000480139 DPEP1P16444 411 aa25.05■■□□□ 1.6
LIME1-205ENST00000480139 A0A0G2JLW4 131 aa25.04■■□□□ 1.6
LIME1-205ENST00000480139 H0YIN7 160 aa25.04■■□□□ 1.6
LIME1-205ENST00000480139 ALDH1L1O75891 902 aa25.04■■□□□ 1.6
LIME1-205ENST00000480139 KCNA3P22001 575 aa25.04■■□□□ 1.6
LIME1-205ENST00000480139 GCKRQ14397 625 aa25.04■■□□□ 1.6
LIME1-205ENST00000480139 C2CD5Q86YS7 1000 aa25.04■■□□□ 1.6
LIME1-205ENST00000480139 HSP90B1P14625 803 aaKnown RBP25.03■■□□□ 1.6
LIME1-205ENST00000480139 CHRNA5P30532 468 aa25.03■■□□□ 1.6
LIME1-205ENST00000480139 CRY2Q49AN0 593 aa25.03■■□□□ 1.6
LIME1-205ENST00000480139 SLC4A10Q6U841 1118 aa25.03■■□□□ 1.6
LIME1-205ENST00000480139 FAM89AQ96GI7 184 aa25.03■■□□□ 1.6
LIME1-205ENST00000480139 SRCIN1Q9C0H9 1055 aa25.03■■□□□ 1.6
LIME1-205ENST00000480139 CDHR2Q9BYE9 1310 aa25.03■■□□□ 1.6
LIME1-205ENST00000480139 SRGNP10124 158 aa25.02■■□□□ 1.6
LIME1-205ENST00000480139 ATF7IPQ6VMQ6 1270 aa25.01■■□□□ 1.59
LIME1-205ENST00000480139 SYNE4Q8N205 404 aa25.01■■□□□ 1.59
LIME1-205ENST00000480139 NLRP3Q96P20 1036 aa25.01■■□□□ 1.59
LIME1-205ENST00000480139 RCAN3Q9UKA8 241 aa25.01■■□□□ 1.59
LIME1-205ENST00000480139 ARFGEF1Q9Y6D6 1849 aa25■■□□□ 1.59
LIME1-205ENST00000480139 H7C1W4 665 aa25■■□□□ 1.59
LIME1-205ENST00000480139 STYK1Q6J9G0 422 aa25■■□□□ 1.59
LIME1-205ENST00000480139 MASTLQ96GX5 879 aa25■■□□□ 1.59
LIME1-205ENST00000480139 PIM2Q9P1W9 311 aa25■■□□□ 1.59
LIME1-205ENST00000480139 IRS4O14654 1257 aaPredicted RBP24.99■■□□□ 1.59
LIME1-205ENST00000480139 ABCC4O15439 1325 aa24.99■■□□□ 1.59
LIME1-205ENST00000480139 MYH3P11055 1940 aa24.99■■□□□ 1.59
LIME1-205ENST00000480139 NPR1P16066 1061 aa24.99■■□□□ 1.59
LIME1-205ENST00000480139 ZKSCAN2Q63HK3 967 aa24.99■■□□□ 1.59
LIME1-205ENST00000480139 FRAT1Q92837 279 aaPredicted RBP24.99■■□□□ 1.59
LIME1-205ENST00000480139 HCLS1P14317 486 aaPredicted RBP24.98■■□□□ 1.59
LIME1-205ENST00000480139 TRIM27P14373 513 aa24.98■■□□□ 1.59
LIME1-205ENST00000480139 CCT4P50991 539 aaKnown RBP24.98■■□□□ 1.59
LIME1-205ENST00000480139 HOXA10P31260 410 aaPredicted RBP24.97■■□□□ 1.59
LIME1-205ENST00000480139 CASP7P55210 303 aa24.97■■□□□ 1.59
LIME1-205ENST00000480139 RTL5Q5HYW3 569 aaPredicted RBP24.97■■□□□ 1.59
LIME1-205ENST00000480139 UBE3BQ7Z3V4 1068 aa24.97■■□□□ 1.59
LIME1-205ENST00000480139 GRM8O00222 908 aa24.96■■□□□ 1.59
LIME1-205ENST00000480139 C3orf67Q6ZVT6 689 aa24.96■■□□□ 1.59
LIME1-205ENST00000480139 CNKSR1Q969H4 720 aa24.96■■□□□ 1.59
LIME1-205ENST00000480139 CACNA1SQ13698 1873 aa24.96■■□□□ 1.59
LIME1-205ENST00000480139 UTYO14607 1347 aa24.95■■□□□ 1.58
LIME1-205ENST00000480139 PDE8AO60658 829 aa24.95■■□□□ 1.58
LIME1-205ENST00000480139 SF3B3Q15393 1217 aaKnown RBP24.95■■□□□ 1.58
LIME1-205ENST00000480139 DALRD3Q5D0E6 543 aaKnown RBP24.95■■□□□ 1.58
LIME1-205ENST00000480139 TTLL6Q8N841 843 aa24.95■■□□□ 1.58
LIME1-205ENST00000480139 PLA2G12BQ9BX93 195 aa24.95■■□□□ 1.58
LIME1-205ENST00000480139 INTS3Q68E01 1043 aaKnown RBP24.94■■□□□ 1.58
LIME1-205ENST00000480139 RPGRQ92834 1020 aaKnown RBP24.94■■□□□ 1.58
LIME1-205ENST00000480139 ZNF622Q969S3 477 aaKnown RBP eCLIP24.94■■□□□ 1.58
LIME1-205ENST00000480139 C9orf78Q9NZ63 289 aaPredicted RBP24.94■■□□□ 1.58
LIME1-205ENST00000480139 ALDH1B1P30837 517 aa24.93■■□□□ 1.58
LIME1-205ENST00000480139 JARID2Q92833 1246 aaPredicted RBP24.93■■□□□ 1.58
LIME1-205ENST00000480139 CRAMP1Q96RY5 1269 aa24.93■■□□□ 1.58
LIME1-205ENST00000480139 SLX4Q8IY92 1834 aa24.92■■□□□ 1.58
LIME1-205ENST00000480139 DCAF8L1A6NGE4 600 aa24.92■■□□□ 1.58
LIME1-205ENST00000480139 RBM17Q96I25 401 aaKnown RBP24.92■■□□□ 1.58
LIME1-205ENST00000480139 YBX3P16989 372 aaKnown RBP eCLIP24.91■■□□□ 1.58
LIME1-205ENST00000480139 GPR162Q16538 588 aa24.91■■□□□ 1.58
LIME1-205ENST00000480139 BCS1LQ9Y276 419 aa24.91■■□□□ 1.58
LIME1-205ENST00000480139 CTSWP56202 376 aa24.9■■□□□ 1.58
LIME1-205ENST00000480139 PRPF40BQ6NWY9 871 aaKnown RBP24.9■■□□□ 1.58
LIME1-205ENST00000480139 USP44Q9H0E7 712 aa24.9■■□□□ 1.58
LIME1-205ENST00000480139 RTL9Q8NET4 1388 aa24.9■■□□□ 1.58
LIME1-205ENST00000480139 GRIN3BO60391 1043 aa24.89■■□□□ 1.58
LIME1-205ENST00000480139 CCDC152Q4G0S7 254 aa24.89■■□□□ 1.58
LIME1-205ENST00000480139 DZIP1LQ8IYY4 767 aaKnown RBP24.89■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms