RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-238ENST00000479894 GNAT3A8MTJ3 354 aa20.84■□□□□ 0.93
HDLBP-238ENST00000479894 TRAF5O00463 557 aa20.84■□□□□ 0.93
HDLBP-238ENST00000479894 KNSTRNQ9Y448 316 aa20.84■□□□□ 0.93
HDLBP-238ENST00000479894 GAS2L2Q8NHY3 880 aa20.83■□□□□ 0.93
HDLBP-238ENST00000479894 CRY2Q49AN0 593 aa20.82■□□□□ 0.92
HDLBP-238ENST00000479894 NIP7Q9Y221 180 aaKnown RBP eCLIP20.82■□□□□ 0.92
HDLBP-238ENST00000479894 DIAPH1O60610 1272 aaKnown RBP20.81■□□□□ 0.92
HDLBP-238ENST00000479894 ADARB2Q9NS39 739 aaKnown RBP20.81■□□□□ 0.92
HDLBP-238ENST00000479894 CEMIPQ8WUJ3 1361 aa20.81■□□□□ 0.92
HDLBP-238ENST00000479894 CELF2O95319 508 aaKnown RBP20.8■□□□□ 0.92
HDLBP-238ENST00000479894 LARGE2Q8N3Y3 721 aa20.8■□□□□ 0.92
HDLBP-238ENST00000479894 USP16Q9Y5T5 823 aa20.8■□□□□ 0.92
HDLBP-238ENST00000479894 NUP98P52948 1817 aa20.79■□□□□ 0.92
HDLBP-238ENST00000479894 AKAP11Q9UKA4 1901 aa20.78■□□□□ 0.92
HDLBP-238ENST00000479894 NOGQ13253 232 aa20.78■□□□□ 0.92
HDLBP-238ENST00000479894 AMER1Q5JTC6 1135 aaPredicted RBP20.78■□□□□ 0.92
HDLBP-238ENST00000479894 GPRC5DQ9NZD1 345 aa20.78■□□□□ 0.92
HDLBP-238ENST00000479894 BTBD11A6QL63 1104 aa20.77■□□□□ 0.92
HDLBP-238ENST00000479894 GTF2E1P29083 439 aaPredicted RBP20.77■□□□□ 0.92
HDLBP-238ENST00000479894 PRPF38BQ5VTL8 546 aaKnown RBP20.77■□□□□ 0.92
HDLBP-238ENST00000479894 CIAPIN1Q6FI81 312 aa20.77■□□□□ 0.92
HDLBP-238ENST00000479894 NIM1KQ8IY84 436 aa20.77■□□□□ 0.92
HDLBP-238ENST00000479894 VPS33BQ9H267 617 aa20.77■□□□□ 0.92
HDLBP-238ENST00000479894 PGAP2Q9UHJ9 254 aa20.77■□□□□ 0.92
HDLBP-238ENST00000479894 RIC1Q4ADV7 1423 aa20.77■□□□□ 0.91
HDLBP-238ENST00000479894 HOXA10P31260 410 aaPredicted RBP20.76■□□□□ 0.91
HDLBP-238ENST00000479894 PIP4K2AP48426 406 aaPredicted RBP20.76■□□□□ 0.91
HDLBP-238ENST00000479894 NYXQ9GZU5 481 aa20.76■□□□□ 0.91
HDLBP-238ENST00000479894 KCNQ3O43525 872 aa20.75■□□□□ 0.91
HDLBP-238ENST00000479894 SNRPA1P09661 255 aaKnown RBP20.75■□□□□ 0.91
HDLBP-238ENST00000479894 ZC3H15Q8WU90 426 aaKnown RBP20.75■□□□□ 0.91
HDLBP-238ENST00000479894 CDHR2Q9BYE9 1310 aa20.75■□□□□ 0.91
HDLBP-238ENST00000479894 FAM177BA6PVY3 158 aa20.74■□□□□ 0.91
HDLBP-238ENST00000479894 LAMB4A4D0S4 1761 aa20.73■□□□□ 0.91
HDLBP-238ENST00000479894 RPGRQ92834 1020 aaKnown RBP20.73■□□□□ 0.91
HDLBP-238ENST00000479894 SAGE1Q9NXZ1 904 aa20.73■□□□□ 0.91
HDLBP-238ENST00000479894 ABCC12Q96J65 1359 aa20.72■□□□□ 0.91
HDLBP-238ENST00000479894 POLR2AP24928 1970 aaKnown RBP20.72■□□□□ 0.91
HDLBP-238ENST00000479894 NBPF26B4DH59 902 aa20.72■□□□□ 0.91
HDLBP-238ENST00000479894 NBPF10Q6P3W6 841 aaKnown RBP20.72■□□□□ 0.91
HDLBP-238ENST00000479894 NBPF15Q8N660 670 aa20.72■□□□□ 0.91
HDLBP-238ENST00000479894 CRAMP1Q96RY5 1269 aa20.72■□□□□ 0.91
HDLBP-238ENST00000479894 GLIS2Q9BZE0 524 aaPredicted RBP20.72■□□□□ 0.91
HDLBP-238ENST00000479894 IBTKQ9P2D0 1353 aaPredicted RBP20.72■□□□□ 0.91
HDLBP-238ENST00000479894 NPC1L1Q9UHC9 1359 aa20.72■□□□□ 0.91
HDLBP-238ENST00000479894 COL3A1P02461 1466 aaPredicted RBP20.71■□□□□ 0.91
HDLBP-238ENST00000479894 PRAMEF22A3QJZ6 481 aa20.71■□□□□ 0.91
HDLBP-238ENST00000479894 PPIP5K2O43314 1243 aa20.71■□□□□ 0.91
HDLBP-238ENST00000479894 HLFQ16534 295 aa20.71■□□□□ 0.91
HDLBP-238ENST00000479894 CDC37L1Q7L3B6 337 aa20.71■□□□□ 0.91
HDLBP-238ENST00000479894 SOX10P56693 466 aa20.7■□□□□ 0.9
HDLBP-238ENST00000479894 PPEF1O14829 653 aaPredicted RBP20.69■□□□□ 0.9
HDLBP-238ENST00000479894 CXCL9Q07325 125 aa20.69■□□□□ 0.9
HDLBP-238ENST00000479894 RBM17Q96I25 401 aaKnown RBP20.69■□□□□ 0.9
HDLBP-238ENST00000479894 ZNRF3Q9ULT6 936 aa20.69■□□□□ 0.9
HDLBP-238ENST00000479894 ERVV-1B6SEH8 477 aa20.68■□□□□ 0.9
HDLBP-238ENST00000479894 DDX10Q13206 875 aaKnown RBP20.68■□□□□ 0.9
HDLBP-238ENST00000479894 NUTM1Q86Y26 1132 aa20.68■□□□□ 0.9
HDLBP-238ENST00000479894 ZIC5Q96T25 663 aa20.68■□□□□ 0.9
HDLBP-238ENST00000479894 ZNF408Q9H9D4 720 aa20.68■□□□□ 0.9
HDLBP-238ENST00000479894 HUNKP57058 714 aa20.67■□□□□ 0.9
HDLBP-238ENST00000479894 AOC3Q16853 763 aa20.67■□□□□ 0.9
HDLBP-238ENST00000479894 SUPT20HQ8NEM7 779 aa20.67■□□□□ 0.9
HDLBP-238ENST00000479894 TMX4Q9H1E5 349 aaPredicted RBP20.67■□□□□ 0.9
HDLBP-238ENST00000479894 U2SURPO15042 1029 aaKnown RBP20.66■□□□□ 0.9
HDLBP-238ENST00000479894 GMPSP49915 693 aaPredicted RBP20.66■□□□□ 0.9
HDLBP-238ENST00000479894 RTFDC1Q9BY42 306 aaPredicted RBP20.66■□□□□ 0.9
HDLBP-238ENST00000479894 PER1O15534 1290 aaPredicted RBP20.65■□□□□ 0.9
HDLBP-238ENST00000479894 HIRAP54198 1017 aaPredicted RBP20.65■□□□□ 0.9
HDLBP-238ENST00000479894 CCDC102AQ96A19 550 aa20.65■□□□□ 0.9
HDLBP-238ENST00000479894 FAM155AB1AL88 458 aaPredicted RBP20.64■□□□□ 0.89
HDLBP-238ENST00000479894 TNIP1Q15025 636 aa20.64■□□□□ 0.89
HDLBP-238ENST00000479894 RGMBQ6NW40 437 aa20.64■□□□□ 0.89
HDLBP-238ENST00000479894 MAP3K15Q6ZN16 1313 aa20.63■□□□□ 0.89
HDLBP-238ENST00000479894 BCL2L13Q9BXK5 485 aa20.63■□□□□ 0.89
HDLBP-238ENST00000479894 ATP6V0A2Q9Y487 856 aa20.63■□□□□ 0.89
HDLBP-238ENST00000479894 CTU1Q7Z7A3 348 aaKnown RBP20.62■□□□□ 0.89
HDLBP-238ENST00000479894 TRPM4Q8TD43 1214 aa20.62■□□□□ 0.89
HDLBP-238ENST00000479894 PHACTR3Q96KR7 559 aa20.62■□□□□ 0.89
HDLBP-238ENST00000479894 ANKRD36CQ5JPF3 1778 aa20.62■□□□□ 0.89
HDLBP-238ENST00000479894 TCERG1O14776 1098 aaKnown RBP20.61■□□□□ 0.89
HDLBP-238ENST00000479894 GCC1Q96CN9 775 aa20.61■□□□□ 0.89
HDLBP-238ENST00000479894 RNF186Q9NXI6 227 aa20.61■□□□□ 0.89
HDLBP-238ENST00000479894 UBN2Q6ZU65 1347 aa20.6■□□□□ 0.89
HDLBP-238ENST00000479894 KIF23Q02241 960 aaPredicted RBP20.6■□□□□ 0.89
HDLBP-238ENST00000479894 KIAA2012Q0VF49 1180 aa20.6■□□□□ 0.89
HDLBP-238ENST00000479894 SLC51AQ86UW1 340 aa20.6■□□□□ 0.89
HDLBP-238ENST00000479894 RTF1Q92541 710 aaKnown RBP20.6■□□□□ 0.89
HDLBP-238ENST00000479894 CNOT7Q9UIV1 285 aaKnown RBP20.6■□□□□ 0.89
HDLBP-238ENST00000479894 H7C1D1 291 aa20.59■□□□□ 0.89
HDLBP-238ENST00000479894 PRKAR2BP31323 418 aa20.59■□□□□ 0.89
HDLBP-238ENST00000479894 SUSD4Q5VX71 490 aa20.59■□□□□ 0.89
HDLBP-238ENST00000479894 USP48Q86UV5 1035 aa20.59■□□□□ 0.89
HDLBP-238ENST00000479894 REM2Q8IYK8 340 aaPredicted RBP20.59■□□□□ 0.89
HDLBP-238ENST00000479894 C2orf69Q8N8R5 385 aa20.59■□□□□ 0.89
HDLBP-238ENST00000479894 NLRP3Q96P20 1036 aa20.59■□□□□ 0.89
HDLBP-238ENST00000479894 GBA2Q9HCG7 927 aaPredicted RBP20.59■□□□□ 0.89
HDLBP-238ENST00000479894 LAMB2P55268 1798 aa20.59■□□□□ 0.89
HDLBP-238ENST00000479894 TRPA1O75762 1119 aa20.58■□□□□ 0.89
HDLBP-238ENST00000479894 NTSR2O95665 410 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms