RNA–Protein interactions for RNA: ENST00000479365.5

SSR1-206, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-206ENST00000479365 UBR3Q6ZT12 1888 aa9.86□□□□□ -0.83
SSR1-206ENST00000479365 TTC13Q8NBP0 860 aa9.86□□□□□ -0.83
SSR1-206ENST00000479365 UTRNP46939 3433 aa9.85□□□□□ -0.83
SSR1-206ENST00000479365 HSP90AB1P08238 724 aaKnown RBP9.85□□□□□ -0.83
SSR1-206ENST00000479365 HMOX1P09601 288 aa9.85□□□□□ -0.83
SSR1-206ENST00000479365 FLAD1Q8NFF5 587 aa9.85□□□□□ -0.83
SSR1-206ENST00000479365 KIAA1468Q9P260 1216 aa9.85□□□□□ -0.83
SSR1-206ENST00000479365 NPC1L1Q9UHC9 1359 aa9.85□□□□□ -0.83
SSR1-206ENST00000479365 APBB1O00213 710 aa9.84□□□□□ -0.83
SSR1-206ENST00000479365 SSFA2P28290 1259 aa9.84□□□□□ -0.83
SSR1-206ENST00000479365 CABP4P57796 275 aa9.84□□□□□ -0.83
SSR1-206ENST00000479365 AMHR2Q16671 573 aa9.84□□□□□ -0.83
SSR1-206ENST00000479365 NFATC2IPQ8NCF5 419 aa9.84□□□□□ -0.83
SSR1-206ENST00000479365 SLC4A5Q9BY07 1137 aa9.84□□□□□ -0.83
SSR1-206ENST00000479365 RBM27Q9P2N5 1060 aaKnown RBP9.84□□□□□ -0.83
SSR1-206ENST00000479365 SMAPO00193 183 aa9.83□□□□□ -0.84
SSR1-206ENST00000479365 DIAPH1O60610 1272 aaKnown RBP9.83□□□□□ -0.84
SSR1-206ENST00000479365 YBX3P16989 372 aaKnown RBP eCLIP9.83□□□□□ -0.844e-9■□□□□ 11.3
SSR1-206ENST00000479365 MAP2K5Q13163 448 aa9.83□□□□□ -0.84
SSR1-206ENST00000479365 MTHFSDQ2M296 383 aaKnown RBP9.83□□□□□ -0.84
SSR1-206ENST00000479365 C1orf141Q5JVX7 400 aa9.83□□□□□ -0.84
SSR1-206ENST00000479365 NPM2Q86SE8 214 aaKnown RBP9.83□□□□□ -0.84
SSR1-206ENST00000479365 LGR6Q9HBX8 967 aa9.83□□□□□ -0.84
SSR1-206ENST00000479365 ZNF831Q5JPB2 1677 aa9.83□□□□□ -0.84
SSR1-206ENST00000479365 COL5A3P25940 1745 aaPredicted RBP9.82□□□□□ -0.84
SSR1-206ENST00000479365 TK2O00142 265 aa9.82□□□□□ -0.84
SSR1-206ENST00000479365 HMGB2P26583 209 aaKnown RBP9.82□□□□□ -0.84
SSR1-206ENST00000479365 GPR162Q16538 588 aa9.82□□□□□ -0.84
SSR1-206ENST00000479365 AKAP4Q5JQC9 854 aa9.82□□□□□ -0.84
SSR1-206ENST00000479365 PACS2Q86VP3 889 aa9.82□□□□□ -0.84
SSR1-206ENST00000479365 PARP9Q8IXQ6 854 aa9.82□□□□□ -0.84
SSR1-206ENST00000479365 CCDC102AQ96A19 550 aa9.82□□□□□ -0.84
SSR1-206ENST00000479365 ADGRG1Q9Y653 693 aa9.82□□□□□ -0.84
SSR1-206ENST00000479365 MRC1P22897 1456 aa9.82□□□□□ -0.84
SSR1-206ENST00000479365 RNMTO43148 476 aaKnown RBP9.81□□□□□ -0.84
SSR1-206ENST00000479365 PTCD1O75127 700 aaKnown RBP9.81□□□□□ -0.84
SSR1-206ENST00000479365 SLC52A2Q9HAB3 445 aa9.81□□□□□ -0.84
SSR1-206ENST00000479365 SEPT9Q9UHD8 586 aaPredicted RBP9.81□□□□□ -0.84
SSR1-206ENST00000479365 RABGEF1Q9UJ41 708 aa9.81□□□□□ -0.84
SSR1-206ENST00000479365 PNMA3Q9UL41 463 aa9.81□□□□□ -0.84
SSR1-206ENST00000479365 CD2APQ9Y5K6 639 aa9.81□□□□□ -0.84
SSR1-206ENST00000479365 TJP1Q07157 1748 aa9.81□□□□□ -0.84
SSR1-206ENST00000479365 CNTNAP4Q9C0A0 1308 aa9.81□□□□□ -0.84
SSR1-206ENST00000479365 SCN11AQ9UI33 1791 aa9.8□□□□□ -0.84
SSR1-206ENST00000479365 ADAMTS7Q9UKP4 1686 aa9.8□□□□□ -0.84
SSR1-206ENST00000479365 GOLGB1Q14789 3259 aaKnown RBP9.8□□□□□ -0.84
SSR1-206ENST00000479365 RC3H1Q5TC82 1133 aaKnown RBP9.8□□□□□ -0.84
SSR1-206ENST00000479365 NUDT18Q6ZVK8 323 aa9.8□□□□□ -0.84
SSR1-206ENST00000479365 ZNF784Q8NCA9 323 aaPredicted RBP9.8□□□□□ -0.84
SSR1-206ENST00000479365 TATDN2Q93075 761 aa9.8□□□□□ -0.84
SSR1-206ENST00000479365 GOPCQ9HD26 462 aa9.8□□□□□ -0.84
SSR1-206ENST00000479365 CICQ96RK0 1608 aaPredicted RBP9.79□□□□□ -0.84
SSR1-206ENST00000479365 KCPQ6ZWJ8 1503 aa9.79□□□□□ -0.84
SSR1-206ENST00000479365 IRF6O14896 467 aa9.79□□□□□ -0.84
SSR1-206ENST00000479365 U2SURPO15042 1029 aaKnown RBP9.79□□□□□ -0.84
SSR1-206ENST00000479365 HRO43593 1189 aa9.79□□□□□ -0.84
SSR1-206ENST00000479365 RPS6KA4O75676 772 aa9.79□□□□□ -0.84
SSR1-206ENST00000479365 MMP10P09238 476 aa9.79□□□□□ -0.84
SSR1-206ENST00000479365 SLC39A6Q13433 755 aa9.79□□□□□ -0.84
SSR1-206ENST00000479365 TRAPPC3LQ5T215 181 aa9.79□□□□□ -0.84
SSR1-206ENST00000479365 RTCBQ9Y3I0 505 aaKnown RBP9.79□□□□□ -0.84
SSR1-206ENST00000479365 MYH14Q7Z406 1995 aaKnown RBP9.78□□□□□ -0.84
SSR1-206ENST00000479365 NBPF26B4DH59 902 aa9.78□□□□□ -0.84
SSR1-206ENST00000479365 BHMG1C9JSJ3 638 aaPredicted RBP9.78□□□□□ -0.84
SSR1-206ENST00000479365 GYS1P13807 737 aa9.78□□□□□ -0.84
SSR1-206ENST00000479365 CRKLP46109 303 aaKnown RBP9.78□□□□□ -0.84
SSR1-206ENST00000479365 INTS5Q6P9B9 1019 aaKnown RBP9.78□□□□□ -0.84
SSR1-206ENST00000479365 DNAJC10Q8IXB1 793 aa9.78□□□□□ -0.84
SSR1-206ENST00000479365 C4AP0C0L4 1744 aa9.77□□□□□ -0.85
SSR1-206ENST00000479365 A6NJR5 290 aa9.77□□□□□ -0.85
SSR1-206ENST00000479365 PPP2R1AP30153 589 aa9.77□□□□□ -0.85
SSR1-206ENST00000479365 IL17REQ8NFR9 667 aa9.77□□□□□ -0.85
SSR1-206ENST00000479365 PHACTR3Q96KR7 559 aa9.77□□□□□ -0.85
SSR1-206ENST00000479365 SRP68Q9UHB9 627 aaKnown RBP9.77□□□□□ -0.85
SSR1-206ENST00000479365 WWC3Q9ULE0 1092 aa9.77□□□□□ -0.85
SSR1-206ENST00000479365 KIAA1551Q9HCM1 1747 aa9.76□□□□□ -0.85
SSR1-206ENST00000479365 RFC4P35249 363 aa9.76□□□□□ -0.85
SSR1-206ENST00000479365 NLRP7Q8WX94 980 aa9.76□□□□□ -0.85
SSR1-206ENST00000479365 PHOX2BQ99453 314 aa9.76□□□□□ -0.85
SSR1-206ENST00000479365 PXDNLA1KZ92 1463 aa9.76□□□□□ -0.85
SSR1-206ENST00000479365 C10orf71Q711Q0 1435 aa9.75□□□□□ -0.85
SSR1-206ENST00000479365 GRIN3BO60391 1043 aa9.75□□□□□ -0.85
SSR1-206ENST00000479365 CYP19A1P11511 503 aaPredicted RBP9.75□□□□□ -0.85
SSR1-206ENST00000479365 PRKAR2BP31323 418 aa9.75□□□□□ -0.85
SSR1-206ENST00000479365 DDR1Q08345 913 aa9.75□□□□□ -0.85
SSR1-206ENST00000479365 METTL3Q86U44 580 aaKnown RBP9.75□□□□□ -0.85
SSR1-206ENST00000479365 NLGN1Q8N2Q7 840 aa9.75□□□□□ -0.85
SSR1-206ENST00000479365 RBM46Q8TBY0 533 aaKnown RBP9.75□□□□□ -0.85
SSR1-206ENST00000479365 PXYLP1Q8TE99 480 aa9.75□□□□□ -0.85
SSR1-206ENST00000479365 NBPF3Q9H094 633 aa9.75□□□□□ -0.85
SSR1-206ENST00000479365 PCDH10Q9P2E7 1040 aa9.75□□□□□ -0.85
SSR1-206ENST00000479365 CHD4Q14839 1912 aa9.75□□□□□ -0.85
SSR1-206ENST00000479365 USP42Q9H9J4 1324 aaKnown RBP9.75□□□□□ -0.85
SSR1-206ENST00000479365 UBR2Q8IWV8 1755 aa9.74□□□□□ -0.85
SSR1-206ENST00000479365 GNAT3A8MTJ3 354 aa9.74□□□□□ -0.85
SSR1-206ENST00000479365 OATP04181 439 aa9.74□□□□□ -0.85
SSR1-206ENST00000479365 PDIA4P13667 645 aaKnown RBP9.74□□□□□ -0.85
SSR1-206ENST00000479365 MRPL50Q8N5N7 158 aaKnown RBP9.74□□□□□ -0.85
SSR1-206ENST00000479365 GAS2L2Q8NHY3 880 aa9.74□□□□□ -0.85
SSR1-206ENST00000479365 CFAP53Q96M91 514 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms