RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 ZNF853P0CG23 659 aa24.88■■□□□ 1.57
SDF4-206ENST00000478938 CARD6Q9BX69 1037 aa24.88■■□□□ 1.57
SDF4-206ENST00000478938 DNAJC5Q9H3Z4 198 aa24.88■■□□□ 1.57
SDF4-206ENST00000478938 TTC21AQ8NDW8 1320 aa24.88■■□□□ 1.57
SDF4-206ENST00000478938 TMEM132EQ6IEE7 984 aa24.88■■□□□ 1.57
SDF4-206ENST00000478938 CXorf56Q9H5V9 222 aa24.88■■□□□ 1.57
SDF4-206ENST00000478938 HMMRO75330 724 aa24.87■■□□□ 1.57
SDF4-206ENST00000478938 ST3GAL1Q11201 340 aa24.87■■□□□ 1.57
SDF4-206ENST00000478938 HOMER1Q86YM7 354 aa24.87■■□□□ 1.57
SDF4-206ENST00000478938 SPATA32Q96LK8 384 aa24.87■■□□□ 1.57
SDF4-206ENST00000478938 CABP2Q9NPB3 220 aa24.87■■□□□ 1.57
SDF4-206ENST00000478938 EVCP57679 992 aa24.86■■□□□ 1.57
SDF4-206ENST00000478938 CCDC158Q5M9N0 1113 aa24.86■■□□□ 1.57
SDF4-206ENST00000478938 BICD2Q8TD16 824 aa24.86■■□□□ 1.57
SDF4-206ENST00000478938 NECAB1Q8N987 351 aa24.86■■□□□ 1.57
SDF4-206ENST00000478938 HYPKQ9NX55 129 aa24.86■■□□□ 1.57
SDF4-206ENST00000478938 IVLP07476 585 aa24.85■■□□□ 1.57
SDF4-206ENST00000478938 PDRG1Q9NUG6 133 aa24.85■■□□□ 1.57
SDF4-206ENST00000478938 STAG3Q9UJ98 1225 aa24.85■■□□□ 1.57
SDF4-206ENST00000478938 KIAA0232Q92628 1395 aa24.84■■□□□ 1.57
SDF4-206ENST00000478938 NPHP3Q7Z494 1330 aa24.84■■□□□ 1.57
SDF4-206ENST00000478938 FANCGO15287 622 aa24.84■■□□□ 1.57
SDF4-206ENST00000478938 URI1O94763 535 aaPredicted RBP24.84■■□□□ 1.57
SDF4-206ENST00000478938 IFIT2P09913 472 aaKnown RBP24.84■■□□□ 1.57
SDF4-206ENST00000478938 MAP4K4O95819 1239 aaPredicted RBP24.84■■□□□ 1.57
SDF4-206ENST00000478938 LARP1BQ659C4 914 aaKnown RBP24.84■■□□□ 1.57
SDF4-206ENST00000478938 CCDC91Q7Z6B0 441 aa24.84■■□□□ 1.57
SDF4-206ENST00000478938 PPM1EQ8WY54 764 aa24.84■■□□□ 1.57
SDF4-206ENST00000478938 FUT8Q9BYC5 575 aa24.84■■□□□ 1.57
SDF4-206ENST00000478938 GLI2P10070 1586 aa24.84■■□□□ 1.57
SDF4-206ENST00000478938 BECN2A8MW95 431 aa24.83■■□□□ 1.57
SDF4-206ENST00000478938 A0A1W2PP64 1363 aa24.83■■□□□ 1.57
SDF4-206ENST00000478938 NBPF11Q86T75 865 aa24.83■■□□□ 1.56
SDF4-206ENST00000478938 LEO1Q8WVC0 666 aaPredicted RBP24.83■■□□□ 1.56
SDF4-206ENST00000478938 VWDEQ8N2E2 1590 aa24.82■■□□□ 1.56
SDF4-206ENST00000478938 EFCAB8A8MWE9 144 aa24.82■■□□□ 1.56
SDF4-206ENST00000478938 GSDMDP57764 484 aa24.82■■□□□ 1.56
SDF4-206ENST00000478938 PGBD1Q96JS3 809 aa24.82■■□□□ 1.56
SDF4-206ENST00000478938 VPS18Q9P253 973 aa24.82■■□□□ 1.56
SDF4-206ENST00000478938 ETF1P62495 437 aaKnown RBP24.82■■□□□ 1.56
SDF4-206ENST00000478938 CARD10Q9BWT7 1032 aa24.82■■□□□ 1.56
SDF4-206ENST00000478938 LRRCC1Q9C099 1032 aa24.82■■□□□ 1.56
SDF4-206ENST00000478938 ARFGAP3Q9NP61 516 aa24.82■■□□□ 1.56
SDF4-206ENST00000478938 DONSONQ9NYP3 566 aa24.82■■□□□ 1.56
SDF4-206ENST00000478938 MCTP2Q6DN12 878 aa24.81■■□□□ 1.56
SDF4-206ENST00000478938 ARMCX5Q6P1M9 558 aa24.81■■□□□ 1.56
SDF4-206ENST00000478938 YTHDC2Q9H6S0 1430 aaKnown RBP24.81■■□□□ 1.56
SDF4-206ENST00000478938 PSDA5PKW4 1024 aaPredicted RBP24.81■■□□□ 1.56
SDF4-206ENST00000478938 GNL2Q13823 731 aaKnown RBP24.81■■□□□ 1.56
SDF4-206ENST00000478938 DNAJC21Q5F1R6 531 aaKnown RBP24.81■■□□□ 1.56
SDF4-206ENST00000478938 DHX40Q8IX18 779 aaKnown RBP24.81■■□□□ 1.56
SDF4-206ENST00000478938 PRAM1Q96QH2 718 aa24.81■■□□□ 1.56
SDF4-206ENST00000478938 FAM83GA6ND36 823 aa24.8■■□□□ 1.56
SDF4-206ENST00000478938 CAVIN2O95810 425 aa24.8■■□□□ 1.56
SDF4-206ENST00000478938 DDX54Q8TDD1 881 aaKnown RBP24.8■■□□□ 1.56
SDF4-206ENST00000478938 ZSCAN16Q9H4T2 348 aaPredicted RBP24.8■■□□□ 1.56
SDF4-206ENST00000478938 EVC2Q86UK5 1308 aa24.8■■□□□ 1.56
SDF4-206ENST00000478938 CORO7P57737 925 aa24.8■■□□□ 1.56
SDF4-206ENST00000478938 SUGP1Q8IWZ8 645 aaKnown RBP24.8■■□□□ 1.56
SDF4-206ENST00000478938 SCAND2PQ9GZW5 306 aaPredicted RBP24.8■■□□□ 1.56
SDF4-206ENST00000478938 GSCP56915 257 aaPredicted RBP24.79■■□□□ 1.56
SDF4-206ENST00000478938 FBXW7Q969H0 707 aa24.79■■□□□ 1.56
SDF4-206ENST00000478938 PHLPP2Q6ZVD8 1323 aa24.79■■□□□ 1.56
SDF4-206ENST00000478938 FYB1O15117 783 aa24.79■■□□□ 1.56
SDF4-206ENST00000478938 TPM1P09493 284 aa24.79■■□□□ 1.56
SDF4-206ENST00000478938 FBLN1P23142 703 aa24.79■■□□□ 1.56
SDF4-206ENST00000478938 ME3Q16798 604 aa24.79■■□□□ 1.56
SDF4-206ENST00000478938 OSBPL5Q9H0X9 879 aaPredicted RBP24.79■■□□□ 1.56
SDF4-206ENST00000478938 SUFUQ9UMX1 484 aa24.79■■□□□ 1.56
SDF4-206ENST00000478938 DCTN1Q14203 1278 aa24.78■■□□□ 1.56
SDF4-206ENST00000478938 LRRFIP1Q32MZ4 808 aaKnown RBP24.78■■□□□ 1.56
SDF4-206ENST00000478938 LSG1Q9H089 658 aaKnown RBP24.78■■□□□ 1.56
SDF4-206ENST00000478938 STX1AQ16623 288 aa24.78■■□□□ 1.56
SDF4-206ENST00000478938 TULP4Q9NRJ4 1543 aa24.77■■□□□ 1.56
SDF4-206ENST00000478938 SMC2O95347 1197 aa24.77■■□□□ 1.56
SDF4-206ENST00000478938 MMS22LQ6ZRQ5 1243 aa24.77■■□□□ 1.56
SDF4-206ENST00000478938 PLEKHA4Q9H4M7 779 aa24.77■■□□□ 1.56
SDF4-206ENST00000478938 SWT1Q5T5J6 900 aaKnown RBP24.77■■□□□ 1.56
SDF4-206ENST00000478938 AOPEPQ8N6M6 819 aa24.77■■□□□ 1.56
SDF4-206ENST00000478938 PARD6BQ9BYG5 372 aa24.77■■□□□ 1.56
SDF4-206ENST00000478938 PARP3Q9Y6F1 533 aa24.77■■□□□ 1.56
SDF4-206ENST00000478938 PNPLA6Q8IY17 1366 aa24.77■■□□□ 1.56
SDF4-206ENST00000478938 TMC6Q7Z403 805 aa24.76■■□□□ 1.55
SDF4-206ENST00000478938 SPG7Q9UQ90 795 aa24.76■■□□□ 1.55
SDF4-206ENST00000478938 SGSM2O43147 1006 aa24.76■■□□□ 1.55
SDF4-206ENST00000478938 ADCK5Q3MIX3 580 aa24.76■■□□□ 1.55
SDF4-206ENST00000478938 NBPF6Q5VWK0 638 aa24.76■■□□□ 1.55
SDF4-206ENST00000478938 TRIM65Q6PJ69 517 aa24.76■■□□□ 1.55
SDF4-206ENST00000478938 NBPF4Q96M43 638 aa24.76■■□□□ 1.55
SDF4-206ENST00000478938 SRRTQ9BXP5 876 aaKnown RBP24.76■■□□□ 1.55
SDF4-206ENST00000478938 SFPQP23246 707 aaKnown RBP eCLIP24.75■■□□□ 1.55
SDF4-206ENST00000478938 SAFB2Q14151 953 aaKnown RBP eCLIP24.75■■□□□ 1.55
SDF4-206ENST00000478938 FAM212AQ96EL1 285 aa24.75■■□□□ 1.55
SDF4-206ENST00000478938 JAKMIP1Q96N16 626 aaKnown RBP24.75■■□□□ 1.55
SDF4-206ENST00000478938 BCCIPQ9P287 314 aaKnown RBP eCLIP24.75■■□□□ 1.55
SDF4-206ENST00000478938 LONRF2Q1L5Z9 754 aa24.75■■□□□ 1.55
SDF4-206ENST00000478938 SLC4A10Q6U841 1118 aa24.75■■□□□ 1.55
SDF4-206ENST00000478938 GPR161Q8N6U8 529 aaKnown RBP24.75■■□□□ 1.55
SDF4-206ENST00000478938 PDE11AQ9HCR9 933 aa24.75■■□□□ 1.55
SDF4-206ENST00000478938 NRXN1Q9ULB1 1477 aa24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms