RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 SUSD4Q5VX71 490 aa18.83■□□□□ 0.6
SMARCE1-209ENST00000478349 CHADLQ6NUI6 762 aa18.83■□□□□ 0.6
SMARCE1-209ENST00000478349 NLRP3Q96P20 1036 aa18.83■□□□□ 0.6
SMARCE1-209ENST00000478349 CRAMP1Q96RY5 1269 aa18.83■□□□□ 0.6
SMARCE1-209ENST00000478349 ZNF277Q9NRM2 450 aaPredicted RBP18.83■□□□□ 0.6
SMARCE1-209ENST00000478349 CHL1O00533 1208 aa18.82■□□□□ 0.6
SMARCE1-209ENST00000478349 LAS1LQ9Y4W2 734 aaKnown RBP18.82■□□□□ 0.6
SMARCE1-209ENST00000478349 PPEF1O14829 653 aaPredicted RBP18.81■□□□□ 0.6
SMARCE1-209ENST00000478349 PDIA6Q15084 440 aa18.81■□□□□ 0.6
SMARCE1-209ENST00000478349 IFFO2Q5TF58 517 aa18.81■□□□□ 0.6
SMARCE1-209ENST00000478349 SYNE4Q8N205 404 aa18.81■□□□□ 0.6
SMARCE1-209ENST00000478349 DDX21Q9NR30 783 aaKnown RBP eCLIP18.81■□□□□ 0.6
SMARCE1-209ENST00000478349 POTECB2RU33 542 aa18.8■□□□□ 0.6
SMARCE1-209ENST00000478349 HDGFL1Q5TGJ6 251 aa18.8■□□□□ 0.6
SMARCE1-209ENST00000478349 LDHDQ86WU2 507 aa18.8■□□□□ 0.6
SMARCE1-209ENST00000478349 JMYQ8N9B5 988 aa18.8■□□□□ 0.6
SMARCE1-209ENST00000478349 PRKRIP1Q9H875 184 aaPredicted RBP18.8■□□□□ 0.6
SMARCE1-209ENST00000478349 DICER1Q9UPY3 1922 aaKnown RBP18.8■□□□□ 0.6
SMARCE1-209ENST00000478349 EIF6P56537 245 aaKnown RBP18.79■□□□□ 0.6
SMARCE1-209ENST00000478349 AIMP1Q12904 312 aaKnown RBP18.79■□□□□ 0.6
SMARCE1-209ENST00000478349 COPS6Q7L5N1 327 aa18.79■□□□□ 0.6
SMARCE1-209ENST00000478349 LRP10Q7Z4F1 713 aa18.79■□□□□ 0.6
SMARCE1-209ENST00000478349 PNMA8AQ86V59 439 aaPredicted RBP18.79■□□□□ 0.6
SMARCE1-209ENST00000478349 GPC2Q8N158 579 aa18.79■□□□□ 0.6
SMARCE1-209ENST00000478349 XAGE3Q8WTP9 111 aa18.79■□□□□ 0.6
SMARCE1-209ENST00000478349 CHMP4AQ9BY43 222 aa18.79■□□□□ 0.6
SMARCE1-209ENST00000478349 HACL1Q9UJ83 578 aa18.79■□□□□ 0.6
SMARCE1-209ENST00000478349 ADAMTS8Q9UP79 889 aa18.79■□□□□ 0.6
SMARCE1-209ENST00000478349 HTRA3P83110 453 aa18.78■□□□□ 0.6
SMARCE1-209ENST00000478349 NECTIN2Q92692 538 aa18.78■□□□□ 0.6
SMARCE1-209ENST00000478349 CFAP44Q96MT7 982 aa18.78■□□□□ 0.6
SMARCE1-209ENST00000478349 DBF4Q9UBU7 674 aaPredicted RBP18.78■□□□□ 0.6
SMARCE1-209ENST00000478349 CACNA1SQ13698 1873 aa18.77■□□□□ 0.6
SMARCE1-209ENST00000478349 FZD9O00144 591 aa18.77■□□□□ 0.6
SMARCE1-209ENST00000478349 PROSER3Q2NL68 480 aa18.77■□□□□ 0.6
SMARCE1-209ENST00000478349 SLC10A5Q5PT55 438 aa18.77■□□□□ 0.6
SMARCE1-209ENST00000478349 OLFM4Q6UX06 510 aa18.77■□□□□ 0.6
SMARCE1-209ENST00000478349 LARGE2Q8N3Y3 721 aa18.77■□□□□ 0.6
SMARCE1-209ENST00000478349 SUPT20HQ8NEM7 779 aa18.77■□□□□ 0.6
SMARCE1-209ENST00000478349 VPS33BQ9H267 617 aa18.77■□□□□ 0.6
SMARCE1-209ENST00000478349 TAF1DQ9H5J8 278 aaPredicted RBP18.77■□□□□ 0.6
SMARCE1-209ENST00000478349 TRMT112Q9UI30 125 aaKnown RBP18.77■□□□□ 0.6
SMARCE1-209ENST00000478349 TRIM35Q9UPQ4 493 aa18.77■□□□□ 0.6
SMARCE1-209ENST00000478349 NUP98P52948 1817 aa18.77■□□□□ 0.59
SMARCE1-209ENST00000478349 SH3TC1Q8TE82 1336 aa18.76■□□□□ 0.59
SMARCE1-209ENST00000478349 ZNF541Q9H0D2 1346 aa18.76■□□□□ 0.59
SMARCE1-209ENST00000478349 ANXA1P04083 346 aa18.76■□□□□ 0.59
SMARCE1-209ENST00000478349 LMOD1P29536 600 aaPredicted RBP18.76■□□□□ 0.59
SMARCE1-209ENST00000478349 TCIRG1Q13488 830 aa18.76■□□□□ 0.59
SMARCE1-209ENST00000478349 CREBZFQ9NS37 354 aa18.76■□□□□ 0.59
SMARCE1-209ENST00000478349 HYPKQ9NX55 129 aa18.76■□□□□ 0.59
SMARCE1-209ENST00000478349 CCDC88AQ3V6T2 1871 aa18.75■□□□□ 0.59
SMARCE1-209ENST00000478349 EAPPQ56P03 285 aaPredicted RBP18.75■□□□□ 0.59
SMARCE1-209ENST00000478349 DDX46Q7L014 1031 aaKnown RBP18.75■□□□□ 0.59
SMARCE1-209ENST00000478349 TMC4Q7Z404 712 aa18.75■□□□□ 0.59
SMARCE1-209ENST00000478349 NLRP10Q86W26 655 aa18.75■□□□□ 0.59
SMARCE1-209ENST00000478349 NIM1KQ8IY84 436 aa18.75■□□□□ 0.59
SMARCE1-209ENST00000478349 PLBD2Q8NHP8 589 aa18.75■□□□□ 0.59
SMARCE1-209ENST00000478349 CHPF2Q9P2E5 772 aa18.75■□□□□ 0.59
SMARCE1-209ENST00000478349 SNED1Q8TER0 1413 aa18.74■□□□□ 0.59
SMARCE1-209ENST00000478349 BBOX1O75936 387 aa18.74■□□□□ 0.59
SMARCE1-209ENST00000478349 EPHX2P34913 555 aa18.74■□□□□ 0.59
SMARCE1-209ENST00000478349 GNAI1P63096 354 aa18.74■□□□□ 0.59
SMARCE1-209ENST00000478349 ATP6V0A2Q9Y487 856 aa18.74■□□□□ 0.59
SMARCE1-209ENST00000478349 HSP90B1P14625 803 aaKnown RBP18.73■□□□□ 0.59
SMARCE1-209ENST00000478349 PPP4R3CPQ6ZMV5 832 aa18.73■□□□□ 0.59
SMARCE1-209ENST00000478349 IFT57Q9NWB7 429 aa18.73■□□□□ 0.59
SMARCE1-209ENST00000478349 CLEC11AQ9Y240 323 aa18.73■□□□□ 0.59
SMARCE1-209ENST00000478349 ABCC4O15439 1325 aa18.73■□□□□ 0.59
SMARCE1-209ENST00000478349 SCN4AP35499 1836 aa18.72■□□□□ 0.59
SMARCE1-209ENST00000478349 TCERG1O14776 1098 aaKnown RBP18.72■□□□□ 0.59
SMARCE1-209ENST00000478349 PPIP5K2O43314 1243 aa18.72■□□□□ 0.59
SMARCE1-209ENST00000478349 DUSP27Q5VZP5 1158 aa18.72■□□□□ 0.59
SMARCE1-209ENST00000478349 ANKRD13DQ6ZTN6 518 aa18.72■□□□□ 0.59
SMARCE1-209ENST00000478349 GOLGA2Q08379 1002 aa18.71■□□□□ 0.59
SMARCE1-209ENST00000478349 KRT24Q2M2I5 525 aa18.71■□□□□ 0.59
SMARCE1-209ENST00000478349 DPP8Q6V1X1 898 aaPredicted RBP18.71■□□□□ 0.59
SMARCE1-209ENST00000478349 MBIPQ9NS73 344 aa18.71■□□□□ 0.59
SMARCE1-209ENST00000478349 GJA3Q9Y6H8 435 aa18.71■□□□□ 0.59
SMARCE1-209ENST00000478349 POTEIP0CG38 1075 aa18.7■□□□□ 0.58
SMARCE1-209ENST00000478349 POTEJP0CG39 1038 aa18.7■□□□□ 0.58
SMARCE1-209ENST00000478349 HCLS1P14317 486 aaPredicted RBP18.7■□□□□ 0.58
SMARCE1-209ENST00000478349 GRAPQ13588 217 aa18.7■□□□□ 0.58
SMARCE1-209ENST00000478349 C3orf67Q6ZVT6 689 aa18.7■□□□□ 0.58
SMARCE1-209ENST00000478349 SP8Q8IXZ3 490 aa18.7■□□□□ 0.58
SMARCE1-209ENST00000478349 GRAPLQ8TC17 118 aaPredicted RBP18.7■□□□□ 0.58
SMARCE1-209ENST00000478349 APAF1O14727 1248 aa18.69■□□□□ 0.58
SMARCE1-209ENST00000478349 MPNDQ8N594 471 aa18.69■□□□□ 0.58
SMARCE1-209ENST00000478349 TMEM88BA6NKF7 163 aa18.68■□□□□ 0.58
SMARCE1-209ENST00000478349 ZEB1P37275 1124 aaPredicted RBP18.68■□□□□ 0.58
SMARCE1-209ENST00000478349 RTFDC1Q9BY42 306 aaPredicted RBP18.68■□□□□ 0.58
SMARCE1-209ENST00000478349 PASKQ96RG2 1323 aa18.68■□□□□ 0.58
SMARCE1-209ENST00000478349 ANKRD36CQ5JPF3 1778 aa18.68■□□□□ 0.58
SMARCE1-209ENST00000478349 DDX58O95786 925 aaKnown RBP18.67■□□□□ 0.58
SMARCE1-209ENST00000478349 ZNF853P0CG23 659 aa18.67■□□□□ 0.58
SMARCE1-209ENST00000478349 RIC3Q7Z5B4 369 aa18.67■□□□□ 0.58
SMARCE1-209ENST00000478349 ZNRF3Q9ULT6 936 aa18.67■□□□□ 0.58
SMARCE1-209ENST00000478349 TRIM28Q13263 835 aaKnown RBP18.66■□□□□ 0.58
SMARCE1-209ENST00000478349 AOC3Q16853 763 aa18.66■□□□□ 0.58
SMARCE1-209ENST00000478349 USP50Q70EL3 339 aaPredicted RBP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms