RNA–Protein interactions for RNA: ENST00000478336.5

ARF1-208, Transcript of ADP ribosylation factor 1, humanhuman

TSL 2

Gene ARF1, Length 930 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF1-208ENST00000478336 CHD4Q14839 1912 aa30.77■■■□□ 2.52
ARF1-208ENST00000478336 DDX58O95786 925 aaKnown RBP30.76■■■□□ 2.51
ARF1-208ENST00000478336 DALRD3Q5D0E6 543 aaKnown RBP30.76■■■□□ 2.51
ARF1-208ENST00000478336 UTP14AQ9BVJ6 771 aaKnown RBP30.76■■■□□ 2.51
ARF1-208ENST00000478336 RNF123Q5XPI4 1314 aa30.75■■■□□ 2.51
ARF1-208ENST00000478336 SRGNP10124 158 aa30.74■■■□□ 2.51
ARF1-208ENST00000478336 HNRNPUQ00839 825 aaKnown RBP eCLIP30.74■■■□□ 2.511e-6■□□□□ 8.3
ARF1-208ENST00000478336 TRIM28Q13263 835 aaKnown RBP30.74■■■□□ 2.51
ARF1-208ENST00000478336 ADCY9O60503 1353 aa30.74■■■□□ 2.51
ARF1-208ENST00000478336 ATP5J2-PTCD1G3V325 749 aa30.73■■■□□ 2.51
ARF1-208ENST00000478336 FLIIQ13045 1269 aa30.73■■■□□ 2.51
ARF1-208ENST00000478336 KSR2Q6VAB6 950 aa30.73■■■□□ 2.51
ARF1-208ENST00000478336 PI4KAP2A4QPH2 592 aa30.71■■■□□ 2.51
ARF1-208ENST00000478336 STYK1Q6J9G0 422 aa30.71■■■□□ 2.51
ARF1-208ENST00000478336 TTLL6Q8N841 843 aa30.71■■■□□ 2.51
ARF1-208ENST00000478336 PI4KAP1Q8N8J0 262 aa30.71■■■□□ 2.51
ARF1-208ENST00000478336 METTL22Q9BUU2 404 aaPredicted RBP30.71■■■□□ 2.51
ARF1-208ENST00000478336 MAP3K2Q9Y2U5 619 aa30.71■■■□□ 2.51
ARF1-208ENST00000478336 SLC10A5Q5PT55 438 aa30.7■■■□□ 2.51
ARF1-208ENST00000478336 ZNF622Q969S3 477 aaKnown RBP eCLIP30.7■■■□□ 2.51
ARF1-208ENST00000478336 MASTLQ96GX5 879 aa30.7■■■□□ 2.51
ARF1-208ENST00000478336 MYD88Q99836 296 aa30.7■■■□□ 2.51
ARF1-208ENST00000478336 CRY2Q49AN0 593 aa30.69■■■□□ 2.5
ARF1-208ENST00000478336 TRMT112Q9UI30 125 aaKnown RBP30.69■■■□□ 2.5
ARF1-208ENST00000478336 SH3TC1Q8TE82 1336 aa30.68■■■□□ 2.5
ARF1-208ENST00000478336 NPR1P16066 1061 aa30.67■■■□□ 2.5
ARF1-208ENST00000478336 CACNA1SQ13698 1873 aa30.67■■■□□ 2.5
ARF1-208ENST00000478336 FKBP5Q13451 457 aaPredicted RBP30.66■■■□□ 2.5
ARF1-208ENST00000478336 CNKSR1Q969H4 720 aa30.66■■■□□ 2.5
ARF1-208ENST00000478336 DDX60Q8IY21 1712 aaKnown RBP30.65■■■□□ 2.5
ARF1-208ENST00000478336 LAMB2P55268 1798 aa30.65■■■□□ 2.5
ARF1-208ENST00000478336 C3orf67Q6ZVT6 689 aa30.65■■■□□ 2.5
ARF1-208ENST00000478336 SYNE4Q8N205 404 aa30.65■■■□□ 2.5
ARF1-208ENST00000478336 ZNF428Q96B54 188 aa30.65■■■□□ 2.5
ARF1-208ENST00000478336 SLX4Q8IY92 1834 aa30.65■■■□□ 2.5
ARF1-208ENST00000478336 CCDC191Q8NCU4 936 aa30.64■■■□□ 2.5
ARF1-208ENST00000478336 IGKV5-2P06315 115 aa30.63■■■□□ 2.49
ARF1-208ENST00000478336 CT47B1P0C2W7 299 aaPredicted RBP30.62■■■□□ 2.49
ARF1-208ENST00000478336 PRPF40BQ6NWY9 871 aaKnown RBP30.62■■■□□ 2.49
ARF1-208ENST00000478336 FAM89AQ96GI7 184 aa30.62■■■□□ 2.49
ARF1-208ENST00000478336 NLRP3Q96P20 1036 aa30.62■■■□□ 2.49
ARF1-208ENST00000478336 ZBED9Q6R2W3 1325 aa30.62■■■□□ 2.49
ARF1-208ENST00000478336 HCLS1P14317 486 aaPredicted RBP30.61■■■□□ 2.49
ARF1-208ENST00000478336 YY1P25490 414 aa30.61■■■□□ 2.49
ARF1-208ENST00000478336 HOXA10P31260 410 aaPredicted RBP30.61■■■□□ 2.49
ARF1-208ENST00000478336 NEXNQ0ZGT2 675 aa30.61■■■□□ 2.49
ARF1-208ENST00000478336 ARHGAP27Q6ZUM4 889 aa30.61■■■□□ 2.49
ARF1-208ENST00000478336 MRPL50Q8N5N7 158 aaKnown RBP30.61■■■□□ 2.49
ARF1-208ENST00000478336 DNAAF4Q8WXU2 420 aa30.61■■■□□ 2.49
ARF1-208ENST00000478336 CWC25Q9NXE8 425 aaPredicted RBP30.61■■■□□ 2.49
ARF1-208ENST00000478336 ZBTB38Q8NAP3 1195 aaPredicted RBP30.6■■■□□ 2.49
ARF1-208ENST00000478336 SSH1Q8WYL5 1049 aa30.6■■■□□ 2.49
ARF1-208ENST00000478336 NEURL1BA8MQ27 555 aa30.58■■■□□ 2.49
ARF1-208ENST00000478336 PCCAP05165 728 aaPredicted RBP30.58■■■□□ 2.49
ARF1-208ENST00000478336 CWF19L2Q2TBE0 894 aaKnown RBP30.58■■■□□ 2.49
ARF1-208ENST00000478336 ALDH1L2Q3SY69 923 aa30.58■■■□□ 2.49
ARF1-208ENST00000478336 RPGRQ92834 1020 aaKnown RBP30.58■■■□□ 2.49
ARF1-208ENST00000478336 ALDH1B1P30837 517 aa30.57■■■□□ 2.48
ARF1-208ENST00000478336 F6X3S4 739 aa30.56■■■□□ 2.48
ARF1-208ENST00000478336 C21orf2O43822 256 aa30.56■■■□□ 2.48
ARF1-208ENST00000478336 RTL5Q5HYW3 569 aaPredicted RBP30.56■■■□□ 2.48
ARF1-208ENST00000478336 C7orf43Q8WVR3 580 aa30.56■■■□□ 2.48
ARF1-208ENST00000478336 FER1L6Q2WGJ9 1857 aa30.55■■■□□ 2.48
ARF1-208ENST00000478336 IRS4O14654 1257 aaPredicted RBP30.55■■■□□ 2.48
ARF1-208ENST00000478336 LINS1Q8NG48 757 aa30.55■■■□□ 2.48
ARF1-208ENST00000478336 RBM17Q96I25 401 aaKnown RBP30.55■■■□□ 2.48
ARF1-208ENST00000478336 CRAMP1Q96RY5 1269 aa30.55■■■□□ 2.48
ARF1-208ENST00000478336 BCL2L13Q9BXK5 485 aa30.54■■■□□ 2.48
ARF1-208ENST00000478336 ZNF219Q9P2Y4 722 aaPredicted RBP30.54■■■□□ 2.48
ARF1-208ENST00000478336 SBF1O95248 1867 aa30.53■■■□□ 2.48
ARF1-208ENST00000478336 CDHR2Q9BYE9 1310 aa30.52■■■□□ 2.48
ARF1-208ENST00000478336 NFKBIEO00221 500 aa30.52■■■□□ 2.48
ARF1-208ENST00000478336 SMC4Q9NTJ3 1288 aa30.52■■■□□ 2.48
ARF1-208ENST00000478336 PTPRCP08575 1304 aa30.51■■■□□ 2.48
ARF1-208ENST00000478336 GCKRQ14397 625 aa30.51■■■□□ 2.47
ARF1-208ENST00000478336 SF3B3Q15393 1217 aaKnown RBP30.51■■■□□ 2.47
ARF1-208ENST00000478336 BEND3Q5T5X7 828 aa30.51■■■□□ 2.47
ARF1-208ENST00000478336 SOGA3Q5TF21 947 aa30.51■■■□□ 2.47
ARF1-208ENST00000478336 JARID2Q92833 1246 aaPredicted RBP30.51■■■□□ 2.47
ARF1-208ENST00000478336 ABCC4O15439 1325 aa30.5■■■□□ 2.47
ARF1-208ENST00000478336 HSP90B1P14625 803 aaKnown RBP30.5■■■□□ 2.47
ARF1-208ENST00000478336 RASSF7Q02833 373 aa30.5■■■□□ 2.47
ARF1-208ENST00000478336 SNED1Q8TER0 1413 aa30.48■■■□□ 2.47
ARF1-208ENST00000478336 H7C1W4 665 aa30.48■■■□□ 2.47
ARF1-208ENST00000478336 RARSP54136 660 aaKnown RBP30.48■■■□□ 2.47
ARF1-208ENST00000478336 BRPF1P55201 1214 aaPredicted RBP30.48■■■□□ 2.47
ARF1-208ENST00000478336 CCDC93Q567U6 631 aa30.48■■■□□ 2.47
ARF1-208ENST00000478336 LTBP3Q9NS15 1303 aa30.47■■■□□ 2.47
ARF1-208ENST00000478336 TAF1P21675 1872 aa30.46■■■□□ 2.47
ARF1-208ENST00000478336 PDE8AO60658 829 aa30.46■■■□□ 2.47
ARF1-208ENST00000478336 PRELPP51888 382 aa30.46■■■□□ 2.47
ARF1-208ENST00000478336 OLFM4Q6UX06 510 aa30.46■■■□□ 2.47
ARF1-208ENST00000478336 DDX46Q7L014 1031 aaKnown RBP30.46■■■□□ 2.47
ARF1-208ENST00000478336 MYH3P11055 1940 aa30.45■■■□□ 2.47
ARF1-208ENST00000478336 PPEF1O14829 653 aaPredicted RBP30.45■■■□□ 2.47
ARF1-208ENST00000478336 CASP7P55210 303 aa30.45■■■□□ 2.47
ARF1-208ENST00000478336 C9orf131Q5VYM1 1079 aa30.45■■■□□ 2.47
ARF1-208ENST00000478336 UBE3BQ7Z3V4 1068 aa30.45■■■□□ 2.47
ARF1-208ENST00000478336 COL4A1P02462 1669 aa30.44■■■□□ 2.46
ARF1-208ENST00000478336 GRAPQ13588 217 aa30.44■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 945.6 ms