RNA–Protein interactions for RNA: ENST00000478254.5

GFM1-207, Transcript of G elongation factor mitochondrial 1, humanhuman

TSL 5

Gene GFM1, Length 3,470 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFM1-207ENST00000478254 EDC3Q96F86 508 aaKnown RBP13.35□□□□□ -0.27
GFM1-207ENST00000478254 OSBPL3Q9H4L5 887 aa13.35□□□□□ -0.27
GFM1-207ENST00000478254 NBPF7P0C2Y1 421 aaPredicted RBP13.34□□□□□ -0.27
GFM1-207ENST00000478254 TPM4P67936 248 aa13.34□□□□□ -0.27
GFM1-207ENST00000478254 CHST3Q7LGC8 479 aa13.34□□□□□ -0.27
GFM1-207ENST00000478254 CHL1O00533 1208 aa13.34□□□□□ -0.27
GFM1-207ENST00000478254 SH2B1Q9NRF2 756 aaPredicted RBP13.34□□□□□ -0.27
GFM1-207ENST00000478254 ZNF446Q9NWS9 450 aa13.34□□□□□ -0.27
GFM1-207ENST00000478254 CDC42BPBQ9Y5S2 1711 aa13.34□□□□□ -0.27
GFM1-207ENST00000478254 NPHP3Q7Z494 1330 aa13.34□□□□□ -0.27
GFM1-207ENST00000478254 A0A1B0GVL5 298 aa13.34□□□□□ -0.27
GFM1-207ENST00000478254 RAPGEF3O95398 923 aa13.34□□□□□ -0.27
GFM1-207ENST00000478254 SERPINC1P01008 464 aa13.34□□□□□ -0.27
GFM1-207ENST00000478254 POLR3DP05423 398 aaPredicted RBP13.34□□□□□ -0.27
GFM1-207ENST00000478254 OAS2P29728 719 aaKnown RBP13.34□□□□□ -0.27
GFM1-207ENST00000478254 TEFQ10587 303 aa13.34□□□□□ -0.27
GFM1-207ENST00000478254 FBXO31Q5XUX0 539 aaPredicted RBP13.34□□□□□ -0.27
GFM1-207ENST00000478254 CREB3L3Q68CJ9 461 aa13.34□□□□□ -0.27
GFM1-207ENST00000478254 PGBD1Q96JS3 809 aa13.34□□□□□ -0.27
GFM1-207ENST00000478254 PLEKHA4Q9H4M7 779 aa13.34□□□□□ -0.27
GFM1-207ENST00000478254 TAF6LQ9Y6J9 622 aa13.34□□□□□ -0.27
GFM1-207ENST00000478254 SOS1Q07889 1333 aaPredicted RBP13.34□□□□□ -0.27
GFM1-207ENST00000478254 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.33□□□□□ -0.27
GFM1-207ENST00000478254 PNMA6AP0CW24 399 aaPredicted RBP13.33□□□□□ -0.27
GFM1-207ENST00000478254 IBSPP21815 317 aaPredicted RBP13.33□□□□□ -0.27
GFM1-207ENST00000478254 NCBP3Q53F19 620 aaKnown RBP13.33□□□□□ -0.27
GFM1-207ENST00000478254 KIF1BPQ96EK5 621 aa13.33□□□□□ -0.27
GFM1-207ENST00000478254 TTC14Q96N46 770 aa13.33□□□□□ -0.27
GFM1-207ENST00000478254 UNC13BO14795 1591 aa13.33□□□□□ -0.28
GFM1-207ENST00000478254 PLA2G4DQ86XP0 818 aa13.33□□□□□ -0.28
GFM1-207ENST00000478254 GPATCH3Q96I76 525 aa13.33□□□□□ -0.28
GFM1-207ENST00000478254 RNF216Q9NWF9 866 aaPredicted RBP13.33□□□□□ -0.28
GFM1-207ENST00000478254 STX1AQ16623 288 aa13.33□□□□□ -0.28
GFM1-207ENST00000478254 MTHFSDQ2M296 383 aaKnown RBP13.33□□□□□ -0.28
GFM1-207ENST00000478254 OTUD7BQ6GQQ9 843 aa13.33□□□□□ -0.28
GFM1-207ENST00000478254 SMARCE1Q969G3 411 aa13.33□□□□□ -0.28
GFM1-207ENST00000478254 UTP14AQ9BVJ6 771 aaKnown RBP13.33□□□□□ -0.28
GFM1-207ENST00000478254 ABCA6Q8N139 1617 aa13.32□□□□□ -0.28
GFM1-207ENST00000478254 SBNO2Q9Y2G9 1366 aa13.32□□□□□ -0.28
GFM1-207ENST00000478254 TRPM2O94759 1503 aa13.32□□□□□ -0.28
GFM1-207ENST00000478254 NMIQ13287 307 aaPredicted RBP13.32□□□□□ -0.28
GFM1-207ENST00000478254 CFAP100Q494V2 611 aa13.32□□□□□ -0.28
GFM1-207ENST00000478254 USHBP1Q8N6Y0 703 aa13.32□□□□□ -0.28
GFM1-207ENST00000478254 PIK3R4Q99570 1358 aa13.32□□□□□ -0.28
GFM1-207ENST00000478254 PSMA5P28066 241 aa13.32□□□□□ -0.28
GFM1-207ENST00000478254 EVCP57679 992 aa13.32□□□□□ -0.28
GFM1-207ENST00000478254 USP44Q9H0E7 712 aa13.32□□□□□ -0.28
GFM1-207ENST00000478254 RASSF4Q9H2L5 321 aa13.32□□□□□ -0.28
GFM1-207ENST00000478254 RABEP2Q9H5N1 569 aa13.32□□□□□ -0.28
GFM1-207ENST00000478254 PLCH2O75038 1416 aa13.32□□□□□ -0.28
GFM1-207ENST00000478254 ZSCAN26Q16670 478 aa13.32□□□□□ -0.28
GFM1-207ENST00000478254 VPS53Q5VIR6 699 aa13.32□□□□□ -0.28
GFM1-207ENST00000478254 RNF20Q5VTR2 975 aa13.32□□□□□ -0.28
GFM1-207ENST00000478254 XPO4Q9C0E2 1151 aaKnown RBP13.32□□□□□ -0.28
GFM1-207ENST00000478254 GNG11P61952 73 aa13.31□□□□□ -0.28
GFM1-207ENST00000478254 TDRD7Q8NHU6 1098 aaKnown RBP13.31□□□□□ -0.28
GFM1-207ENST00000478254 FEZ2Q9UHY8 353 aaPredicted RBP13.31□□□□□ -0.28
GFM1-207ENST00000478254 LRRC7Q96NW7 1537 aa13.31□□□□□ -0.28
GFM1-207ENST00000478254 GLRX3O76003 335 aaKnown RBP13.31□□□□□ -0.28
GFM1-207ENST00000478254 GTF2A1P52655 376 aaPredicted RBP13.31□□□□□ -0.28
GFM1-207ENST00000478254 KLHDC4Q8TBB5 520 aa13.31□□□□□ -0.28
GFM1-207ENST00000478254 NCOA5Q9HCD5 579 aaKnown RBP13.31□□□□□ -0.28
GFM1-207ENST00000478254 ANO10Q9NW15 660 aa13.31□□□□□ -0.28
GFM1-207ENST00000478254 PI4KAP2A4QPH2 592 aa13.3□□□□□ -0.28
GFM1-207ENST00000478254 KARSQ15046 597 aaKnown RBP13.3□□□□□ -0.28
GFM1-207ENST00000478254 PI4KAP1Q8N8J0 262 aa13.3□□□□□ -0.28
GFM1-207ENST00000478254 DRC1Q96MC2 740 aa13.3□□□□□ -0.28
GFM1-207ENST00000478254 NAT10Q9H0A0 1025 aaKnown RBP13.3□□□□□ -0.28
GFM1-207ENST00000478254 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.3□□□□□ -0.28
GFM1-207ENST00000478254 CCDC129Q6ZRS4 1044 aa13.3□□□□□ -0.28
GFM1-207ENST00000478254 CCDC102AQ96A19 550 aa13.3□□□□□ -0.28
GFM1-207ENST00000478254 SEC62Q99442 399 aaKnown RBP13.3□□□□□ -0.28
GFM1-207ENST00000478254 VPS18Q9P253 973 aa13.3□□□□□ -0.28
GFM1-207ENST00000478254 FAM135BQ49AJ0 1406 aa13.3□□□□□ -0.28
GFM1-207ENST00000478254 STK38Q15208 465 aa13.3□□□□□ -0.28
GFM1-207ENST00000478254 NUDT16Q96DE0 195 aaKnown RBP13.3□□□□□ -0.28
GFM1-207ENST00000478254 PUF60Q9UHX1 559 aaKnown RBP13.3□□□□□ -0.28
GFM1-207ENST00000478254 LCMT1Q9UIC8 334 aa13.3□□□□□ -0.28
GFM1-207ENST00000478254 ADGRL1O94910 1474 aa13.3□□□□□ -0.28
GFM1-207ENST00000478254 ARHGEF40Q8TER5 1519 aa13.29□□□□□ -0.28
GFM1-207ENST00000478254 LEKR1Q6ZMV7 388 aa13.29□□□□□ -0.28
GFM1-207ENST00000478254 DHX37Q8IY37 1157 aaKnown RBP13.29□□□□□ -0.28
GFM1-207ENST00000478254 PPP1R13BQ96KQ4 1090 aa13.29□□□□□ -0.28
GFM1-207ENST00000478254 DNAJC5Q9H3Z4 198 aa13.29□□□□□ -0.28
GFM1-207ENST00000478254 CFAP45Q9UL16 551 aa13.29□□□□□ -0.28
GFM1-207ENST00000478254 CHGBP05060 677 aa13.29□□□□□ -0.28
GFM1-207ENST00000478254 AK7Q96M32 723 aa13.29□□□□□ -0.28
GFM1-207ENST00000478254 SRRTQ9BXP5 876 aaKnown RBP13.29□□□□□ -0.28
GFM1-207ENST00000478254 NPM1P06748 294 aaKnown RBP eCLIP13.29□□□□□ -0.28
GFM1-207ENST00000478254 ST3GAL1Q11201 340 aa13.29□□□□□ -0.28
GFM1-207ENST00000478254 G3BP1Q13283 466 aaKnown RBP eCLIP13.29□□□□□ -0.28
GFM1-207ENST00000478254 SMC1AQ14683 1233 aaKnown RBP13.29□□□□□ -0.28
GFM1-207ENST00000478254 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.29□□□□□ -0.28
GFM1-207ENST00000478254 CPLX3Q8WVH0 158 aa13.29□□□□□ -0.28
GFM1-207ENST00000478254 CYP2C19P33261 490 aa13.28□□□□□ -0.28
GFM1-207ENST00000478254 PLA2G4AP47712 749 aa13.28□□□□□ -0.28
GFM1-207ENST00000478254 Q6ZUG5 572 aa13.28□□□□□ -0.28
GFM1-207ENST00000478254 PI4K2BQ8TCG2 481 aa13.28□□□□□ -0.28
GFM1-207ENST00000478254 CWC15Q9P013 229 aaKnown RBP13.28□□□□□ -0.28
GFM1-207ENST00000478254 SLC27A2O14975 620 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms